prot_H-paniculata_contig7245.15221.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7245.15221.1
Unique Nameprot_H-paniculata_contig7245.15221.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length476
Homology
BLAST of mRNA_H-paniculata_contig7245.15221.1 vs. uniprot
Match: D8LE69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE69_ECTSI)

HSP 1 Score: 635 bits (1638), Expect = 3.210e-217
Identity = 341/498 (68.47%), Postives = 370/498 (74.30%), Query Frame = 0
Query:    1 MAVLVQAGPGGGVDIPAVKAVLHAQGLERDKGLKDRSKPRRLASLPGHTDDLLRHTRGDESTGYPSGHLMPYRLVAGPLLKLA-----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRDAALRESSRTVCGLVTPAGYGEAHGRYENEAQLSHLFPATDGCFVSMGGNV--EPNALLVEGNGYLAAVYSIPDMNLLGRKALSLQVTRVLATPECLGSQRGKVLYVVRSPQHPSGFLETMVYSDRGGLQCPEPLLPVGPLTPPNTAGSSGVAGSWASGRPYVNAHFVLRPWERVVDVKFQPLTTVAELATWGYRRGA-------GAGSAAAPMVAVLTTRRVLMLSATRLTPVALAWGHPPDSAAVLDASGGLSVSAVSIAWAGSSVVCALEDGRVVYLSPGDGMSSSGYT--HGDGRSGIPGDGVAVSASPWRPLCSVDHRMCSGGIGIAACLPDRLCLVARGGVGGGIAHLLTRPFFPLEPLLAGALAAS 476
            MAVL+QAGPGGG+D+PAVKAVLHAQGLERDKGLKDRSKPRRLASLPGHTDDLLRHT G ES G+PSGHLMPYRLVAGPLL+L+           G                            +RDAALRE+SRTVCGLVTPAGYGEAHGRYENEAQLSHLFPATDGCFVS   N   EP+ALLVEG GYLAAVYSIPDM +LGRKALSL VTRV+ATPECLG QRGKVLYVVRSP  PSGFLETMVYSDRGGLQCPEPLLPV      +     GVA  WA GRPY NAH VL P ERVVD KFQ LTTV ELATWGYRRG                          LMLSA RLT VA AWGHPPDS + L ASGGLSVSAVS+AWAGSSVVC LEDGR+VYL+PGDG+ ++     H      IPG G ++ + PWRPLCS+D R+C+GGIGIAACLPDRLCLV RGG GGGI+HL+TRPFFPLEPL+AG LAA+
Sbjct:  132 MAVLIQAGPGGGLDVPAVKAVLHAQGLERDKGLKDRSKPRRLASLPGHTDDLLRHTTG-ESAGFPSGHLMPYRLVAGPLLRLSTAEGGGAAAGLGGVSHEERRRFLVLYEIVATEGSDRPPPPNRDAALRETSRTVCGLVTPAGYGEAHGRYENEAQLSHLFPATDGCFVSTSANAGAEPSALLVEGGGYLAAVYSIPDMQMLGRKALSLPVTRVIATPECLGPQRGKVLYVVRSPHTPSGFLETMVYSDRGGLQCPEPLLPV-----VSQGEGGGVAPGWAGGRPYANAHLVLEPSERVVDAKFQQLTTVTELATWGYRRGGQXXXXXXXXXXXXXXXXXXXXXXXXLMLSAARLTTVAEAWGHPPDSRSALGASGGLSVSAVSVAWAGSSVVCTLEDGRIVYLNPGDGVKNAFQQNEHQHQEPDIPGGG-SLGSGPWRPLCSMDRRLCAGGIGIAACLPDRLCLVVRGGAGGGISHLITRPFFPLEPLVAGVLAAA 622          
BLAST of mRNA_H-paniculata_contig7245.15221.1 vs. uniprot
Match: A0A6H5KK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK27_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 7.760e-119
Identity = 205/348 (58.91%), Postives = 228/348 (65.52%), Query Frame = 0
Query:  140 RYENEAQLSHLFPATDGCFVSMGGNV--EPNALLVEGNGYLAAVYSIPDMNLLGRKALSLQVTRVLATPECLGSQRGKVLYVVRSPQHPSGFLETMVYSDRGGLQCPEPLLPVGPLTPPNTAGSSGVAGSWASGRPYVNAHFVLRPWERVVDVKFQPLTTVAELATWGYRRGA-------GAGSAAAPMVAVLTTRRVLMLSATRLTPVALAWGHPPDSAAVLDASGGLSVSAVSIAWAGSSVVCALEDGRVVYLSPGDGMSSS--GYTHGDGRSGIPGDGVAVSASPWRPLCSVDHRMCSGGIGIAACLPDRLCLVARGGVGGGIAHLLTRPFFPLEPLLAGALAAS 476
            RYENEAQLSHLFPATDGCFVS   N   EP+ALLVEG GYLAAVYSIPDM +LGRKALSL VTRV+ATPECLG QRGKV+                                       +  G  GVA  WA GRPY NAH VL P ERVV+ KFQ LTT  ELATWGYRR                             LSA RLT VA AWGHPP S + L ASGGLSVSAVS+AWAGSSVVC LEDGR+VYL PGDG++S+   + H      IPG G ++ + PWRPLCS+D R+C+GGIGIAACLPDRLCLV RGG GGGI+HL+TRPFFPLEPL+AG LAA+
Sbjct:    3 RYENEAQLSHLFPATDGCFVSTSANAGAEPSALLVEGGGYLAAVYSIPDMQMLGRKALSLPVTRVIATPECLGPQRGKVV---------------------------------------SQGGGGGVAPGWAGGRPYANAHLVLEPSERVVEAKFQQLTTATELATWGYRRSGQETXXXXXXXXXXXXXXXXXXXXXXXXLSAARLTTVAEAWGHPPHSRSALGASGGLSVSAVSVAWAGSSVVCTLEDGRIVYLHPGDGVNSAFQQHEHQHQEPDIPGGG-SLGSGPWRPLCSMDRRLCAGGIGIAACLPDRLCLVVRGGAGGGISHLITRPFFPLEPLVAGVLAAA 310          
BLAST of mRNA_H-paniculata_contig7245.15221.1 vs. uniprot
Match: A0A7R9YB43_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB43_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.180e-8
Identity = 74/266 (27.82%), Postives = 109/266 (40.98%), Query Frame = 0
Query:  228 GFLETMVYSDRGGLQCPEPLLPVGPLTPPNTAGSSGVAGSWASGRPYVNAHFVLRPWERVVDVKFQPL------TTVAELATWGYRRGA------GAGSAAAPMVAVLTTRRVL-------MLSATRLTPVALAWGHPPDSAAVLDASGGLSVSA-VSIAWAGSSVVCALEDGRVVYLSPGDGMSSSGYTHGDGRSGIPGDGVAVSASPWRPLCSVDHRMCSGGIGIAACLPDRLCLVARGGVGGGIAHLLTRPFFPLEPLLAGAL 473
            G L+T +    GG      L PVG L+                     N  F+  P E +VD  +QP+         + L T  +R  A       A     P++AV TT R L       +L+AT +    ++          +  +     SA +S+ WA  +++   E G V  LS             +  +G PG   +VS +   P+ S+D    +GG  I + LP RL L+ R   G G   ++TRPFFPLEPLL G +
Sbjct:   44 GALDTRIRQRFGGRAPATILQPVGELS---------------------NVMFIFPPGENIVDALWQPVDPEPVQNDASRLWTRAHREAATGAPHPDAEEVGKPLLAVRTTHRALIFDYKMKLLAATTVPRWLISTDLMSAPTETMRGNDECMFSAPISMIWAADTLLVGFEGGMVKALSR------------EAPNGQPGPSTSVSLN-MSPVLSLDASKVAGGYQILSALPTRLILLQRSN-GTGAGRIVTRPFFPLEPLLQGIM 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7245.15221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE69_ECTSI3.210e-21768.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK27_9PHAE7.760e-11958.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9YB43_9STRA3.180e-827.82Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7245contigH-paniculata_contig7245:1349..11144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7245.15221.1mRNA_H-paniculata_contig7245.15221.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7245 1349..11162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7245.15221.1 ID=prot_H-paniculata_contig7245.15221.1|Name=mRNA_H-paniculata_contig7245.15221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=476bp
MAVLVQAGPGGGVDIPAVKAVLHAQGLERDKGLKDRSKPRRLASLPGHTD
DLLRHTRGDESTGYPSGHLMPYRLVAGPLLKLAGGGQEEERRRFLVLYEV
VASENSDSPPPPSRDAALRESSRTVCGLVTPAGYGEAHGRYENEAQLSHL
FPATDGCFVSMGGNVEPNALLVEGNGYLAAVYSIPDMNLLGRKALSLQVT
RVLATPECLGSQRGKVLYVVRSPQHPSGFLETMVYSDRGGLQCPEPLLPV
GPLTPPNTAGSSGVAGSWASGRPYVNAHFVLRPWERVVDVKFQPLTTVAE
LATWGYRRGAGAGSAAAPMVAVLTTRRVLMLSATRLTPVALAWGHPPDSA
AVLDASGGLSVSAVSIAWAGSSVVCALEDGRVVYLSPGDGMSSSGYTHGD
GRSGIPGDGVAVSASPWRPLCSVDHRMCSGGIGIAACLPDRLCLVARGGV
GGGIAHLLTRPFFPLEPLLAGALAAS
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