prot_H-paniculata_contig71973.15174.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig71973.15174.1
Unique Nameprot_H-paniculata_contig71973.15174.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6H5KY90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY90_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.040e-20
Identity = 72/213 (33.80%), Postives = 101/213 (47.42%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYG-GQDCGVEMLAYADSDDATRDDSRRSM-------------------------------------VNEVPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKHISALMDV 175
            MW AT TRPDIA+ VR   + C +P   H RA + IL +V+R +DL I++  G   G+ M  +AD+D A++   RRS+                                     + EV FL Q    + P        + E NQG   +AQN  SS  ++HIDV+HH +R+ V   ++ I  V +  Q AD LTKAL    FE H + +M V
Sbjct:  538 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGISFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCSSWFSRTQKCVTLSRTVAEYVSLADVMKEVLFLEQVWRFMFP--------VFEDNQGAIHLAQNPISSSNSKHIDVRHHFIRELVSRKEISIFDVESAYQHADFLTKALHVGDFEFHRNFVMSV 742          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A225WA71_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA71_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.700e-18
Identity = 57/174 (32.76%), Postives = 92/174 (52.87%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALIMPT-----------LEHYPV---IIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKAL 160
            ++  T TRPD+A+ V    +  ENP  +H +A +++L+++    DL I Y G    VE+ AY D+D  +  D  RS V+    +  G  +   +           L H  V    ++E NQG   ++ N   + RT+H+D+KHH +R+ V    +D+ YV T++Q AD+LTK L
Sbjct:  238 LYITTYTRPDVAYIVAQLSRFLENPGQQHWKAAIRVLRYLKGTRDLGIVYNGNKGKVELTAYTDADWGSNLDDHRS-VSSTMMMISGAPVAFKSKYQPELGGGGDLGHEQVGATQVLEDNQGAIALSINAGYNARTKHVDIKHHFIRENVAWDIIDVKYVSTKDQLADMLTKGL 410          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: H3H5K8_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5K8_PHYRM)

HSP 1 Score: 88.6 bits (218), Expect = 8.140e-18
Identity = 57/186 (30.65%), Postives = 86/186 (46.24%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALI--------------------------MPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKAL 160
            ++ AT TRPDIA  V    +  ENP  +H  A V++L+++       I Y G    V + A++D+D  +  D RRS+   +  +     +                           M   +     I E NQG   +AQN     RT+H+D++HH +R+ VE   V + YV T+ Q AD+LTKAL
Sbjct:  108 LYIATCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSTRQHGIIYEGGTGSVRLTAFSDADWGSNLDDRRSVSGVIVVIGNAPVVFKSKFQRTMALSLCVQEVLWTRAMLKDMGAFQRNATTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVERGTVTVEYVDTKNQLADILTKAL 293          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6H5JN35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN35_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.390e-17
Identity = 57/176 (32.39%), Postives = 93/176 (52.84%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGG-QDCGVEMLAY-------ADSDDATRDDSRRSMVNEVPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKH 168
            MW A  TRPDIA+ VR   + C +P ++H  A         +AAD R   GG   CG   + +          DD     +   +V E+ FLR+    ++P +    + + E +QG   +AQN  S+  ++HIDV+HHI+R+ VE  ++ +++V +  Q+++ LTK+L   +FE H
Sbjct: 1284 MWLANQTRPDIANAVRAVARYCASPKLRHTDA-----DFASKAADRRSVSGGIVTCGGGAVPWFFRTQVCCAFDDEAEYVALGDVVKEILFLRKIWRFMLPQVGMPCIPVFEDSQGAIQLAQNPVSNSNSKHIDVRHHILRELVERKEISVIHVPSPYQRSEFLTKSLPKDTFESH 1454          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A085N3L3_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N3L3_9BILA)

HSP 1 Score: 85.1 bits (209), Expect = 2.510e-17
Identity = 55/172 (31.98%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKHISAL 172
            ++ AT++RPDIA  V    +  E+P     +AV ++++++  +   ++ +  +   +++  + D+D A  D + R   + + +LRQ  A  M   +  P  I E NQG   +AQ+   S+RT+HIDV+HH +RD  E+  V +VY  + E  ADVLTK L    F++++  L
Sbjct:   30 LYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQKLRFSSEG-NIKLTGFVDADWAG-DHADRKSTSALQWLRQLLA-DMEVPQDGPTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPLGKDKFDRYLKLL 198          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6H5KYS7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.340e-17
Identity = 60/162 (37.04%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    2 WAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYG-GQDCGVEMLAYADSDDATRDD-SRRSMVNEVPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHS-SRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKAL 160
            W AT TRPDIA+ V    + C +P     R  + IL +V+R +DL IT+  G   G+ M  +AD+D A  +  S   ++ E+  LRQ +  ++P      + + E NQG   +AQ   S S  ++HIDV+HH +R+ V   ++ I  V +  Q AD LTKAL
Sbjct:  639 WLATQTRPDIANAVSAVARYCASPKEVRWREGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYAKAEYVSLADVMKELLLLRQVRRFMLPEAGMPCIPVFEDNQGAIQLAQKPISNSSNSKHIDVRHHFIRELVGRKEISIFNVKSAYQHADFLTKAL 800          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A507CTX7_9FUNG (DNA-directed DNA polymerase n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CTX7_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 1.170e-16
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEMLAYADSDDATRDDSRRSMV---NEVPFLRQGQAL-----IMPTLE--HYPV----IIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKHISAL 172
            ++ A  TRPDI   V    K   +P+  H + ++ +L++ L+    ++   G   G  +  YADSD AT  D R+S     +E  +   G A      I   L+  HYP+    ++ E N+G + MA+N   + R +HID+KHH +R+A++   + +V + T++Q AD LTK L G +F K   AL
Sbjct: 1197 LYLARCTRPDIMTAVTILSKYSMSPSEYHWKGILNVLRY-LKGTSAKVLELG---GTTLSGYADSDWATDKDDRKSRTVSSSEAEYYAIGDATKEILWIQNLLKGIHYPIELPTLLYEDNRGAQLMAENPMVTPRAKHIDIKHHFIREAIKNRHIKLVSISTQDQIADGLTKPLTGPAFSKCCDAL 1378          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.150e-16
Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEM--LAYADSDDATRDDSRRSMVNE--------VPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKH 168
            MW A  TRP+ ++ VRT  +    P     +A  KIL ++   A L + Y  QD  V++  + Y D+D A++   RR +           V +    Q  +  +       + E N+G   +A+N  SS R++HIDV+HH +R+  E   + + +V  +EQ AD+L KAL  + FE H
Sbjct: 1076 MWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYK-QDTTVDVGTIVYVDADFASKATDRRPVSGALILVAGCLVSWFSWTQKCVSLSTSEAEYXVFEDNEGAIALAENPFSSSRSKHIDVRHHFLRNLTEEGVIKVTHVPIKEQHADILAKALARNLFEVH 1252          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6A3NEQ7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NEQ7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.680e-15
Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYGGQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALIMPTLEHYPVI------------IMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLT 157
            ++  T TRPDIA  V    +  ENP  +H  A V++L+++     L + Y G    V ++ Y+D+D  T  D R +    +  +     +  P  +    +            I E NQ    +AQN     RT+H+D++HH +++ VE   V + YV T+ Q AD+LT
Sbjct:  479 LYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSPRQLGMVYQGGTQSVTLMVYSDADWGTNLDDRCAPSGVMVMIGNAPVVFKPKFQRTVTLSSAEAEYMALSLIWEDNQAAIALAQNAGYHARTKHVDIRHHFIKENVERGTVKVQYVDTKNQLADILT 647          
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Match: A0A6H5L0S9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S9_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.700e-15
Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 0
Query:    1 MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITYG-GQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALIMPTLEHYPVIIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEEQQADVLTKALEGSSFEKH 168
            MW AT TRPDIA+ VR   + C +P + H +A +  L +V R + + I +  G   G+ M  + D D A++   R                 MP +      + E N+G   +A +  ++  ++HIDV+HH +R+ VE  ++ I +V +E Q AD LTKA+   SF  H
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGNLGYVRRTSWMGIRFERGVVTGMSMQVFVDVDYASKAADR-----------------MPCIP-----VFEDNKGAIQIAHSPITNSNSKHIDVRHHFIRELVERKEISITHVPSEFQHADFLTKAISKESFALH 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71973.15174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY90_9PHAE1.040e-2033.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A225WA71_9STRA1.700e-1832.76Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
H3H5K8_PHYRM8.140e-1830.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN35_9PHAE1.390e-1732.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A085N3L3_9BILA2.510e-1731.98Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
A0A6H5KYS7_9PHAE4.340e-1737.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A507CTX7_9FUNG1.170e-1632.80DNA-directed DNA polymerase n=1 Tax=Synchytrium en... [more]
A0A6H5K622_9PHAE2.150e-1631.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3NEQ7_9STRA1.680e-1529.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L0S9_9PHAE1.700e-1532.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig71973contigH-paniculata_contig71973:15..647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig71973.15174.1mRNA_H-paniculata_contig71973.15174.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig71973 15..665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig71973.15174.1 ID=prot_H-paniculata_contig71973.15174.1|Name=mRNA_H-paniculata_contig71973.15174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MWAATMTRPDIAHTVRTTVKLCENPAVKHKRAVVKILQHVLRAADLRITY
GGQDCGVEMLAYADSDDATRDDSRRSMVNEVPFLRQGQALIMPTLEHYPV
IIMEGNQGTETMAQNKHSSRRTRHIDVKHHIVRDAVEAAKVDIVYVGTEE
QQADVLTKALEGSSFEKHISALMDVV*
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