prot_H-paniculata_contig7188.15164.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI) HSP 1 Score: 210 bits (535), Expect = 1.270e-65 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 0
Query: 82 LNVCS--NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 193
+ CS NNIM+PKENK +RKL+Y+C+RC Y+ED +SGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS
Sbjct: 124 MRFCSECNNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 237
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.030e-42 Identity = 70/106 (66.04%), Postives = 84/106 (79.25%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 192
NNI++PKEN+ R L YAC+RC Y+E+ SCVY NNL+ T KLDIV DVV+DPTLQRSK+ IC++CNY+EAVFFQAD+ AKS SLSLIFVCT+ CG KWV
Sbjct: 8 NNILHPKENRTTRTLFYACNRCAYREEAGQ-SCVYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSLSLIFVCTH--CGKKWV 110
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: B8BUI2_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUI2_THAPS) HSP 1 Score: 110 bits (275), Expect = 5.910e-28 Identity = 56/108 (51.85%), Postives = 74/108 (68.52%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEG-AKSQSLSLIFVCTNRACGHKWVS 193
++++YPKEN+ ERKL+YAC C Y E G +Y+N L GN L V + V DDPTL RS+NA C+KC +NEAVFFQ+D ++ +L+LIFVC N C HKWV+
Sbjct: 8 SSMLYPKENRNERKLLYACRLCRYTE-YAPGQLIYQNILKKEVGNVLHTVPSAVSDDPTLPRSQNAHCDKCGHNEAVFFQSDTSDVRNDTLALIFVCCN--CDHKWVA 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A1Y1IMB2_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMB2_KLENI) HSP 1 Score: 110 bits (275), Expect = 6.440e-28 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
NNI+YP+ENKAE++L YAC RC + ED E SCVYRN + TA + ++Q DV DPTL RSK C C + EAVFFQA + + ++L FVC N C H+W
Sbjct: 11 NNILYPRENKAEKRLEYACGRCDFSEDAEQ-SCVYRNEIHHTADERTQVLQ-DVTSDPTLPRSKALRCPVCKHGEAVFFQATSRGE-EGMTLFFVCCNPNCQHRW 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: UPI001BF53CE6 (Uncharacterized protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI001BF53CE6) HSP 1 Score: 108 bits (271), Expect = 5.900e-27 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 0
Query: 85 CSNNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
CSNNI+YPKE++A + L+YAC +C ++E +S +CVYRN + AG ++ DV DPTL R+K+ C C + EAVFFQA + ++L FVC N +CGH+W
Sbjct: 38 CSNNILYPKEDRANKVLLYACRKCEHQEVADS-NCVYRNVVDHDAGELTQVLSEDVASDPTLPRTKSVRCAACGHGEAVFFQATTRGED-GMTLFFVCCNPSCGHRW 142
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: UPI00192A156F (DNA-directed RNA polymerases II, IV and V subunit 9A-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI00192A156F) HSP 1 Score: 105 bits (262), Expect = 5.660e-26 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
NNI+YPKENK ++ L++AC C ++E + + +CVYRN ++ + G + ++Q DV DPTL R+K C KCN+ E VFFQA + + ++L FVC N CGH+W
Sbjct: 11 NNILYPKENKEQKTLLFACRNCEHQE-ISNDNCVYRNEVLHSVGERTQVLQ-DVAADPTLPRTKTIRCTKCNHPEVVFFQAAARGE-EGMTLFFVCCNPDCGHRW 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A6J1AX74_9ROSI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6J1AX74_9ROSI) HSP 1 Score: 105 bits (261), Expect = 8.000e-26 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
NNI+YPKE++ ++ L+YAC C ++E V +CVYRN + +AG + I+Q DV DPTL R+K+ IC C + EAVFFQA + + ++L FVC N CGH+W
Sbjct: 11 NNILYPKEDREQKILLYACRNCDHQE-VADNNCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A6P5Z8D8_DURZI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6P5Z8D8_DURZI) HSP 1 Score: 104 bits (260), Expect = 1.130e-25 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
NNI+YPKE++ ++ L+YAC C ++E E +CVYRN + +AG + I+Q DV DPTL R+K+ IC C + EAVFFQA + + ++L FVC N CGH+W
Sbjct: 11 NNILYPKEDREQKILLYACRNCDHQEVAED-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A0K9RIQ4_SPIOL (DNA-directed RNA polymerase subunit n=3 Tax=Spermatophyta TaxID=58024 RepID=A0A0K9RIQ4_SPIOL) HSP 1 Score: 104 bits (259), Expect = 1.600e-25 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 87 NNIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 191
NNI+YPKE+K ++ L YAC C ++E E+ +CVYRN + G + ++Q DV DPTL R+K+ C +CN+ EAVFFQA + + ++L FVC N +CGH+W
Sbjct: 11 NNILYPKEDKDQKILQYACRNCDHQEIAEN-NCVYRNEIHHAVGERTQVLQ-DVAADPTLPRTKSVRCTQCNHGEAVFFQATSRGE-EGMTLFFVCCNPSCGHRW 112
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Match: A0A7S3NJ32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ32_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.820e-25 Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 88 NIMYPKENKAERKLVYACSRCTYKEDVESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 192
N+ P+E + R L+ C C Y+E S VY N + +LDI+ ++ DDPTLQRS + +CE CNY+EAV FQA+ G ++SLSLIFVC N C HKW+
Sbjct: 41 NMWQPREERTTRTLMLNCRNCGYEEPATSYK-VYENRIKKEVSTRLDIINPEITDDPTLQRSNDVVCENCNYSEAVLFQAESGITAKSLSLIFVCCN--CKHKWI 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7188.15164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig7188.15164.1 ID=prot_H-paniculata_contig7188.15164.1|Name=mRNA_H-paniculata_contig7188.15164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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