prot_H-paniculata_contig7182.15159.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7182.15159.1
Unique Nameprot_H-paniculata_contig7182.15159.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length477
Homology
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.480e-25
Identity = 114/241 (47.30%), Postives = 135/241 (56.02%), Query Frame = 0
Query:  195 EPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSK--------------KAGGEAAGNKGKKAPSVKKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVKEDPSGEETESDADARRRDQRVAETDEHEPSSDSESDTSDSSDVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPPLSSRPPHDEEWLCPRCLQKKR 421
            +PC VCGG+DNP KALLCDGCD CYH+YCL PPLK+APKG+W CPKCV K                 G A   KG  A       XXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXX    A      +                              ++  +  D+CL C E  D  +I+RC +C+GGG+G+GI+H +CL  PL S P  + EW+CPRC+ KKR
Sbjct: 1153 DPCLVCGGLDNPDKALLCDGCDGCYHVYCLSPPLKRAPKGDWLCPKCVEKVLDASGDDDVPASASTTGPARKGKGSSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQEMRLAALXXXXXXXXXXXXLANNANGVVGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPA-EGEWVCPRCVTKKR 1392          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A7S2MJ69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ69_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.960e-17
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
Query:  195 EPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV--SKKAGGEAAGNKGKK 257
            EPC++CGG + P +++LCD CD CYH++CLKPPL   P+G+WFCPKC   S+K   +    KGKK
Sbjct:    9 EPCEICGGTEKPEESILCDKCDSCYHIFCLKPPLPSIPEGDWFCPKCAPESEKTISDEEVKKGKK 73          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A7S1JGF3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JGF3_9EUGL)

HSP 1 Score: 79.7 bits (195), Expect = 4.750e-14
Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  195 EPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSK 244
            EPC +CGG +   +++LCDGCD  YH++CL+PPLK  P G+WFCP+C +K
Sbjct:   31 EPCVICGGKEEAERSVLCDGCDGAYHIFCLRPPLKTIPDGDWFCPQCQAK 80          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: D8LN06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN06_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.130e-13
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  362 DVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPPLSSRPPHDEEWLCPRCLQKKRSGKGKG 427
            D+CL C E  D  +I+RC NC+GGG+G+GI+H +CL  PL S P  + EW+CPRC+ KKR   G G
Sbjct:   68 DICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPA-EGEWVCPRCVTKKRKHGGPG 132          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A0B6YTE9_9EUPU (PHD-type domain-containing protein (Fragment) n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YTE9_9EUPU)

HSP 1 Score: 72.8 bits (177), Expect = 5.890e-12
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 242
            C +CG  D   + LLCDGCDD +H YCL PPL + PKGEW CP CV
Sbjct:   17 CHMCGRGDGEDQMLLCDGCDDAFHTYCLVPPLSEVPKGEWRCPSCV 62          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: UPI000359FD9E (lysine-specific demethylase 5C-like n=1 Tax=Ficedula albicollis TaxID=59894 RepID=UPI000359FD9E)

HSP 1 Score: 70.9 bits (172), Expect = 9.420e-12
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 242
            C++C   D   K LLCDGCDD YH++CL PPL + PKG W CPKCV
Sbjct:   20 CRICSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGIWRCPKCV 65          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A8C2G3H0_CYPCA (PHD and ring finger domains 1 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2G3H0_CYPCA)

HSP 1 Score: 73.9 bits (180), Expect = 9.650e-12
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVS 243
            C+VCGG D   + LLCDGCDD YHM CL PPL   P  EWFCP C++
Sbjct:  106 CEVCGGRDREDRLLLCDGCDDGYHMECLTPPLDAVPVEEWFCPMCIA 152          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: UPI000A3B858C (lysine-specific demethylase 5C n=1 Tax=Columba livia TaxID=8932 RepID=UPI000A3B858C)

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-11
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 242
            C++C   D   K LLCDGCDD YH++CL PPL + PKG W CPKCV
Sbjct:   18 CRICSRGDEDDKLLLCDGCDDNYHIFCLLPPLPETPKGIWRCPKCV 63          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A671RFK2_9TELE (PHD-type domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671RFK2_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 1.710e-11
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVS 243
            C  CG  D   + LLCDGCDD YH +CL PPL+  PKG+W CPKCV+
Sbjct:   12 CMACGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVA 58          
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A8C1HW19_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1HW19_CYPCA)

HSP 1 Score: 73.9 bits (180), Expect = 3.050e-11
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  197 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVS 243
            C+VCGG D   + LLCDGCDD YHM CL PPL   P  EWFCP C++
Sbjct:  168 CEVCGGRDREDRLLLCDGCDDGYHMECLTPPLDAVPVEEWFCPMCIA 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE1.480e-2547.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MJ69_9STRA3.960e-1753.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1JGF3_9EUGL4.750e-1456.00Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
D8LN06_ECTSI1.130e-1353.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0B6YTE9_9EUPU5.890e-1260.87PHD-type domain-containing protein (Fragment) n=2 ... [more]
UPI000359FD9E9.420e-1260.87lysine-specific demethylase 5C-like n=1 Tax=Ficedu... [more]
A0A8C2G3H0_CYPCA9.650e-1261.70PHD and ring finger domains 1 n=1 Tax=Cyprinus car... [more]
UPI000A3B858C1.500e-1160.87lysine-specific demethylase 5C n=1 Tax=Columba liv... [more]
A0A671RFK2_9TELE1.710e-1159.57PHD-type domain-containing protein n=1 Tax=Sinocyc... [more]
A0A8C1HW19_CYPCA3.050e-1161.70Uncharacterized protein n=1 Tax=Cyprinus carpio Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 363..417
e-value: 9.8E-4
score: 28.4
coord: 196..242
e-value: 7.7E-12
score: 55.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 155..247
e-value: 1.7E-21
score: 78.0
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 197..243
e-value: 2.5E-13
score: 49.7
coord: 364..418
e-value: 1.3E-7
score: 31.4
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 194..244
score: 10.033
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 361..419
score: 9.214
NoneNo IPR availableGENE3D2.30.30.1150coord: 285..420
e-value: 2.5E-13
score: 52.6
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 317..420
coord: 150..255
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 197..241
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 351..422
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 186..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7182contigH-paniculata_contig7182:2995..9992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7182.15159.1mRNA_H-paniculata_contig7182.15159.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7182 2961..11212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7182.15159.1 ID=prot_H-paniculata_contig7182.15159.1|Name=mRNA_H-paniculata_contig7182.15159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
MMREAAANGSVSSGDGVRDGAKVELDNHGKFPGGSLDLFLGTTGRRAKES
AKERIKQDSTWTVAKALRMADGKNGSSGVGSSSKDKVKEDQKEKNKVAPS
TAGAGKKQKQQGNGDGGGGGGGNSDCDIVVGGSGDGGKQKGGGGKRQQGN
GKAGDKKDKLEREMTDDGDGEEEEEEEEEDKGEGSGSEEDDDDDEPCQVC
GGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSKKAGGEA
AGNKGKKAPSVKKEEEKEAGSGGGAGTEGGGRGRVSLGTEEEREALRLAA
LAVLEESSEDMDQDQAATVKEDPSGEETESDADARRRDQRVAETDEHEPS
SDSESDTSDSSDVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPP
LSSRPPHDEEWLCPRCLQKKRSGKGKGKLPAGSNRKTVKKMPPSPSPSAS
AGSSKRKSLTSGGSSQQQQQKKKKNK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD