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Homology
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.330e-30 Identity = 281/560 (50.18%), Postives = 324/560 (57.86%), Query Frame = 2
Query: 2 TPK-GDWTCPLCRKLKARKVYAQKAQEKRDQRQREREEAIAKTPGRKTVKLEESKDPRNIIGILVPERSVDKVCAALREYEVQVAQARKNQAQRELEVARAKEEEKARLEELXXXXXXXXXXXXXXXXXXAANGSVSSGDGVRDGAKVELDNHGKFPGGSLDLFLGTTGRRAKESAKERIKQDSTWTVAKALRMADGKNGSSGVGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSK--------------KAGGEAAGNKGKKAPSVKKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVKEDPSGEETESDADARRRDQRVAETDEHEPSSDSESDTSDSSDVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPPLSSRPPHDEEWLCPRCLQKKR 1636
TPK G W+CP+CRK A KAQ KRDQ++RE +AK+P KT+KLE + PRNIIGI++PERSV+ VC ALR YE ++ + R+ +RE XXXXXXX K+E N K G G G R +E K++ A L DG+ +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PC VCGG+DNP KALLCDGCD CYH+YCL PPLK+APKG+W CPKCV K G A KG A XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX A + ++ + D+CL C E D +I+RC +C+GGG+G+GI+H +CL PL S P + EW+CPRC+ KKR
Sbjct: 878 TPKEGKWSCPICRKRTAHLEREAKAQAKRDQKKRELAAKLAKSPV-KTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREX---------------------------XXXXXXXXXXXXXXXXXXXXXAMKLEERNKQKGKVGG-----GGAGARGDVKREEEAKEEEQDGGAPVLSSLDGRGSFNG-----------DLVQLLQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDPCLVCGGLDNPDKALLCDGCDGCYHVYCLSPPLKRAPKGDWLCPKCVEKVLDASGDDDVPASASTTGPARKGKGSSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQEMRLAALXXXXXXXXXXXXLANNANGVVGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPA-EGEWVCPRCVTKKR 1392
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A7S2MJ69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ69_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.750e-17 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 2
Query: 956 EPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV--SKKAGGEAAGNKGKK 1144
EPC++CGG + P +++LCD CD CYH++CLKPPL P+G+WFCPKC S+K + KGKK
Sbjct: 9 EPCEICGGTEKPEESILCDKCDSCYHIFCLKPPLPSIPEGDWFCPKCAPESEKTISDEEVKKGKK 73
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.430e-14 Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 2
Query: 2 TPK-GDWTCPLCRKLKARKVYAQKAQEKRDQRQREREEAIAKTPGRKTVKLEESKDPRNIIGILVPERSVDKVCAALREYEVQVAQARKNQAQRE 283
TPK G+W+CP+CRK KA KAQ KRDQ++RE +AK+P KT+KLE + PRNIIGI++PERSV+ VC ALR YE ++ + R+ +RE
Sbjct: 586 TPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPV-KTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRE 679
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A7S1JGF3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JGF3_9EUGL) HSP 1 Score: 79.7 bits (195), Expect = 6.630e-14 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query: 956 EPCQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSK 1105
EPC +CGG + +++LCDGCD YH++CL+PPLK P G+WFCP+C +K
Sbjct: 31 EPCVICGGKEEAERSVLCDGCDGAYHIFCLRPPLKTIPDGDWFCPQCQAK 80
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: D8LN06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN06_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.690e-13 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 2
Query: 1457 DVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPPLSSRPPHDEEWLCPRCLQKKRSGKGKG 1654
D+CL C E D +I+RC NC+GGG+G+GI+H +CL PL S P + EW+CPRC+ KKR G G
Sbjct: 68 DICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPA-EGEWVCPRCVTKKRKHGGPG 132
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A0B6YTE9_9EUPU (PHD-type domain-containing protein (Fragment) n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YTE9_9EUPU) HSP 1 Score: 72.8 bits (177), Expect = 7.890e-12 Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 2
Query: 962 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 1099
C +CG D + LLCDGCDD +H YCL PPL + PKGEW CP CV
Sbjct: 17 CHMCGRGDGEDQMLLCDGCDDAFHTYCLVPPLSEVPKGEWRCPSCV 62
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: UPI000359FD9E (lysine-specific demethylase 5C-like n=1 Tax=Ficedula albicollis TaxID=59894 RepID=UPI000359FD9E) HSP 1 Score: 70.9 bits (172), Expect = 1.230e-11 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 2
Query: 962 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 1099
C++C D K LLCDGCDD YH++CL PPL + PKG W CPKCV
Sbjct: 20 CRICSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGIWRCPKCV 65
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A8C2G3H0_CYPCA (PHD and ring finger domains 1 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2G3H0_CYPCA) HSP 1 Score: 73.9 bits (180), Expect = 1.340e-11 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 2
Query: 962 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVS 1102
C+VCGG D + LLCDGCDD YHM CL PPL P EWFCP C++
Sbjct: 106 CEVCGGRDREDRLLLCDGCDDGYHMECLTPPLDAVPVEEWFCPMCIA 152
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: UPI000A3B858C (lysine-specific demethylase 5C n=1 Tax=Columba livia TaxID=8932 RepID=UPI000A3B858C) HSP 1 Score: 71.2 bits (173), Expect = 1.990e-11 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 2
Query: 962 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCV 1099
C++C D K LLCDGCDD YH++CL PPL + PKG W CPKCV
Sbjct: 18 CRICSRGDEDDKLLLCDGCDDNYHIFCLLPPLPETPKGIWRCPKCV 63
BLAST of mRNA_H-paniculata_contig7182.15159.1 vs. uniprot
Match: A0A671RFK2_9TELE (PHD-type domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671RFK2_9TELE) HSP 1 Score: 72.8 bits (177), Expect = 2.350e-11 Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 2
Query: 962 CQVCGGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVS 1102
C CG D + LLCDGCDD YH +CL PPL+ PKG+W CPKCV+
Sbjct: 12 CMACGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVA 58
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Metazoa |
| Seed ortholog score | 76.6 |
| Seed ortholog evalue | 3.4e-11 |
| Seed eggNOG ortholog | 6412.HelroP194466 |
| Preferred name | KDM5A |
| KEGG ko | ko:K11446,ko:K12495,ko:K19952 |
| KEGG Pathway | ko04144,map04144 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000118,GO:0000122,GO:0000228,GO:0000785,GO:0000790,GO:0000976,GO:0000981,GO:0001046,GO:0001047,GO:0001067,GO:0001085,GO:0001650,GO:0001763,GO:0002009,GO:0002164,GO:0002250,GO:0002252,GO:0002376,GO:0002443,GO:0002449,GO:0002456,GO:0002457,GO:0002460,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0003714,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006482,GO:0006725,GO:0006807,GO:0006955,GO:0006996,GO:0007049,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007338,GO:0007525,GO:0007526,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008270,GO:0008284,GO:0009058,GO:0009059,GO:0009566,GO:0009653,GO:0009791,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010817,GO:0016043,GO:0016070,GO:0016569,GO:0016570,GO:0016573,GO:0016577,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019882,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022612,GO:0023051,GO:0030154,GO:0030717,GO:0030718,GO:0030879,GO:0031056,GO:0031057,GO:0031063,GO:0031064,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031490,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032368,GO:0032451,GO:0032452,GO:0032453,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032879,GO:0032922,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0033143,GO:0033599,GO:0033601,GO:0034097,GO:0034641,GO:0034645,GO:0034647,GO:0034648,GO:0034654,GO:0034720,GO:0034721,GO:0035064,GO:0035239,GO:0035257,GO:0035258,GO:0035295,GO:0036098,GO:0036211,GO:0040007,GO:0042127,GO:0042221,GO:0042393,GO:0042752,GO:0042802,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043565,GO:0043966,GO:0043970,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0045475,GO:0045595,GO:0045596,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046883,GO:0046914,GO:0048468,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048569,GO:0048583,GO:0048589,GO:0048608,GO:0048609,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050681,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051090,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051321,GO:0051336,GO:0051346,GO:0051427,GO:0051704,GO:0051716,GO:0060065,GO:0060255,GO:0060429,GO:0060443,GO:0060444,GO:0060560,GO:0060562,GO:0060603,GO:0060763,GO:0060765,GO:0061038,GO:0061061,GO:0061138,GO:0061180,GO:0061458,GO:0061647,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070192,GO:0070193,GO:0070822,GO:0070887,GO:0070988,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090311,GO:0097159,GO:0097659,GO:0098727,GO:0140030,GO:0140034,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901725,GO:1901726,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903046,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1905268,GO:1905952,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000736,GO:2000737,GO:2000864,GO:2001141,GO:2001251 |
| EggNOG free text desc. | demethylase |
| EggNOG OGs | 38D5X@33154,3BA87@33208,3CRN2@33213,COG0055@1,KOG1246@2759 |
| Ec32 ortholog description | PHD-type zinc finger and SANT/Myb domain protein |
| Ec32 ortholog | Ec-27_000910.1 |
| COG Functional cat. | K |
| Best tax level | Bilateria |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009,ko03036,ko04131 |
| Exons | 10 |
| Model size | 1838 |
| Cds size | 1431 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7182.15159.1 >prot_H-paniculata_contig7182.15159.1 ID=prot_H-paniculata_contig7182.15159.1|Name=mRNA_H-paniculata_contig7182.15159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
MMREAAANGSVSSGDGVRDGAKVELDNHGKFPGGSLDLFLGTTGRRAKES AKERIKQDSTWTVAKALRMADGKNGSSGVGSSSKDKVKEDQKEKNKVAPS TAGAGKKQKQQGNGDGGGGGGGNSDCDIVVGGSGDGGKQKGGGGKRQQGN GKAGDKKDKLEREMTDDGDGEEEEEEEEEDKGEGSGSEEDDDDDEPCQVC GGVDNPTKALLCDGCDDCYHMYCLKPPLKKAPKGEWFCPKCVSKKAGGEA AGNKGKKAPSVKKEEEKEAGSGGGAGTEGGGRGRVSLGTEEEREALRLAA LAVLEESSEDMDQDQAATVKEDPSGEETESDADARRRDQRVAETDEHEPS SDSESDTSDSSDVCLTCGESGDKHKIMRCGNCAGGGTGLGIFHYDCLKPP LSSRPPHDEEWLCPRCLQKKRSGKGKGKLPAGSNRKTVKKMPPSPSPSAS AGSSKRKSLTSGGSSQQQQQKKKKNK* back to topmRNA from alignment at H-paniculata_contig7182:2961..11212- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7182.15159.1 ID=mRNA_H-paniculata_contig7182.15159.1|Name=mRNA_H-paniculata_contig7182.15159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8252bp|location=Sequence derived from alignment at H-paniculata_contig7182:2961..11212- (Halopteris paniculata Hal_grac_a_UBK monoicous) GACACCGAAGGGAGACTGGACGTGCCCTCTCTGCCGCAAGCTCAAGGCCC
GCAAGGTGTACGCGCAGAAGGCCCAGGAGAAGCGGGATCAGAGACAGAGG
GAGAGGGAAGAGGCCATCGCCAAAACCCCCGGAAGGAAAACGGTAGGTGG
TGTATTGTCGCCCAAAACATTCTGCGGGACAGAGCGGAGGAGGAGGGGGG
GGTGTACTCATGAAAGCACACGCCGTCCTCTCGCGTTTTTTTCTTCTTCA
CCGTAAAATCCTAGACTTGAGGGCACATCGCACCTGCCCGCCTGCCCGCC
CGCCCGCCCGCCATGCCGGGGTGTACCCATTTTGTTTGCATTTTTTTTTT
TTTTTAAACTCCCCTTCCTCCGCCCCAGGGAGGGCATTATTACAGTGCTT
CACGGCATGCCTTGAATTTTGAATGGAATTAAATGGCAAGTGTTTGCACG
AATTGTAATAGGTGAAGCTGGAGGAGTCAAAGGATCCGCGCAATATCATC
GGGATCCTCGTCCCGGAACGGTCGGTAGATAAAGTGTGTGCTGCGCTGCG
CGAGTATGAGGTGCGAAGGAATAGTTCCTCCCGAAAGTGCCAGATGGAAC
GAAAATCCGCTCCCTCCCTTTCTTGATGATGATATAGGCAAGGAAATGAT
CGCTTTGTTCCCTTTCCCTCGGGACTCATTTTTGGAGTTAGAGTTGTACG
ATATTTGAGCAAAGCATCATCGAACCAGAAGTTGCGTTCTTGTTAATATG
TAGGCTCAAGGTGGTGGTGGTGGTGGTGGTAACGGTCGTTTTAGGAGATA
TAGTATATATGTTAAGTCTGTAAATCAAGTCAATTCTGTTAAAGGGGGAA
CGTTCTCGTGGGCATTGGGCCTATGCTACATGTGAGCCGTTGGTGCACCG
GTAGAGAACGAAGGCTGATTCACTGGTTATAAAGACGGGAAAACTATAGC
GGGCGTGCCGTAACTGTAGAGCGTGCTAGTTTTTTTGTTGTTCATTTGGT
GGTTTATTTCTGCCATAAAATTGTTTTTTTTCGTCTTGCATTGCATGCGT
TTTTTTTAATTCCATTTTGCCATTGCATTTGGCAACAGGTCCAGGTGGCA
CAGGCGCGAAAAAATCAGGCGCAGAGAGAGCTAGAGGTCGCGAGGGCGAA
GGAGGAAGAAAAGGCACGGCTGGAAGAGCTCAGGAAAGAGCAGCGCCGGA
AGGCCGAGGAAAGGAAAGCGATGATGAGGTCAGTCGGGTTTCGTACCAGT
AGTTTATGTTGTAGTTGTTGTGTATGTTGTCATGATCCATTGTTGTCCTT
TTTCGTTGTGTTTTGTCGTCCATGTCTTGTTTTTTTTCGTCTCGCCGAAC
CCAAACGATTTATCCCTGCTACTGTTGTCCAGCTCCTCTTCTCATAGTGT
TTGTTGGTTTTGTAGTGTATGCTTGGAATACATCCTTGTGTCACAGAGGA
GGTACCCGGGGTGATGACATTTCTCCGAAATGATTTGTATCGAAAATGAC
CAAGGATGTTGGGGACCGCTCGAAACTTGCGTCTTCGGGGAAGGATTTTG
TCGAAAATTGTCATTGGATAGGCATACGCCCGTTTCGACAGTGTAGGGTC
CTGCTTCTCGAGAAATGAACCTCGCAACAGACAGGGGTGGTAGATACTTT
CTGATGTATGTACACTGTAGTTGGGGGTGCATCACATATTTACAGGTGGG
TAACCAGCCCTTGAACGTTAAACCGCTTGGACGCGGGATGCTACGTTAGG
AGTATACATTTTGGTGTTGTGTTGCTGATGTCTGGTTCCCAACTTTTTTT
CGCTCTCTCTCTCTCTGTTTTGCCGTCGTTTTCAAATCAGGGGGTAATAC
TCTTTTTAAAAGGCGCGAATTCCTGCGACGATGTATATATATATATATAT
ATATATGTTGTCTTTGATTTATTTATTTTTTTCTCTTCCCCTCTTTTTTC
GTATAGAGAAGCCGCCGCGAACGGCAGCGTGTCCTCTGGCGATGGCGTGC
GGGATGGTGCGAAGGTGGAGCTGGATAACCACGGGAAATTTCCTGGGGGA
AGCCTGGATTTGTTTCTCGGGACGACCGGGCGCCGAGCGAAGGAGTCGGC
GAAGGAAAGAATCAAGCAGGATTCCACATGGACGGTTGCGAAGGCCTTGC
GGATGGTGCGTGTGCACTGTGTACTTTGTGTTGCTGAATAGATTGATGAA
ATCGTGATGGGTGTTGTTGTTCTTGTTGTTCTTGTTGTGCCAGTGTACTA
TATGTATGTCCTAATTGTCATAATCCAAGGATATCAGGGTTTGGTGTAGT
GTAATGCGGTGTGAGAAAATAATCTCCAAGTTTCGATGTTTTGTTTTTCG
ACTCTTGTTTCATATTTTTCTGTTGTTGAAGCAACCTTTGGTTTGTGTAA
TTTTTTGTTTGCTCTGCGAAACTTTTGCTGGTGTCGCGTTTCGGGTCATG
CCTGTAAAGGTTGGTTGTCTGTTGCCAACTCGGCAAGCCGTGACAAGTAA
TTTCCTGAAGATTGTGGTATTCGAAACATGAACACTGTTTACTTGCTCAG
TTGCTGTTGTCATATATATATATTGATGAAGCCCTTTGACAGCTATTGCT
TGTATGTGTTTAGTCGGGTGTTGATCGGGCGACTGCCGCGCTACAGCAAA
GACTTTACATTGTGGATTCGCTCCTTCGTCTGCCGAAGTCGATCATCATG
CAGAGGGTGCAGGATATCATTTTTACAAGTTCATACAAATTTAAACAAAC
GCCTCTCTCAGGTAATTGTCTGATTTAATCAGAATGGAGAGTTAACCTGC
ATGTGGTGTCAGTCATTTTCTTATCCGTTTTTTTTTCTGGTCATTTTCCA
AATCGTCTTTTTTGTTGGTTGGCTCAGCTATTGTTGACGCTTCCTGTACC
GTATACGTGTGTATCGTAGTTCGGTGGTGTGTCGATTTCCAGCATATCAA
TGGTCCGGTATCGTACCTGACTTCTGTACCAACTTTCAGCTATGGTTATT
ACATGCGCTGTTAACAAGGGGCACGGGGCAACGGGGCAAAATAATATCAC
AAACGCGCGAAGCTCAGTATTTTTTCGTCCATCCGTCTGTCTGTCTCTCC
ATGTAATTGTTTGTTCTCCACTCGTTGGCGTTTCGACATGAATGAACACG
AACAACCTGTTCGACGACGGACCGAATATGCGGCAAAAGGCGGATGGTAA
GAATGGTAGCTCCGGTGTTGGGTCATCTTCCAAAGACAAGGTCAAGGAGG
ACCAGAAGGAGAAGAACAAGGTTGCGCCATCAACAGCCGGAGCAGGGAAG
AAGCAGAAACAGCAGGGCAATGGTGATGGTGGGGGCGGCGGCGGCGGAAA
TTCTGACTGTGACATTGTCGTAGGTGGCAGTGGCGATGGCGGCAAGCAGA
AGGGAGGGGGGGGCAAGAGGCAGCAGGGTAACGGTAAGGCCGGGGACAAG
AAGGACAAGTTAGAAAGAGAGATGACTGATGATGGGGACGGGGAGGAGGA
GGAGGAAGAGGAAGAGGAGGACAAGGGAGAAGGGAGTGGTTCCGAGGAGG
ACGACGATGATGATGAGCCGTGCCAGGTGCGTGCTGCGTGTTTTGTTGTT
GTGTGTTTTACCTTCTTTTTTTTTTCTCTAGTTTGCTTTTTGCTTGTTGT
GTTTGACAACCAGAAGCGAGTAAGCGAGCTTGGTTGGCTCCCCAGATTTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTTGTGT
GTGTTGTTTTCCTTGTTTTTTTTATTGAGCTTTCCCTGTGTCATGTTTTT
ATCTTGTATTGTTTTGCAGTATTCAGAGATACAGGGATCGCGTGCTTGAA
TCTTATCTCTTTTAAGTATTACGAACAAGTGAAATGAAGCCAAGGCATGA
ATCGAAATTGCAGCGCGGAGGGAAATGGGAAAAGCATTATTATGTTCTTT
TTATGACCCAGCTCCAGCACATAAACCATTGATGGTAAAATAACGTGTTA
CGTGTAGTTTTGGCTCAAGTGCGCAAGGTTGGAGTTCCGGGAAAATACTT
AGAATTGTTATCTTTTATATATGCATCCCCCCCCCTAACCAACCAACCAA
CCAACCAGAGCGATGGATCACATTTAGAAAAATCAAACCAAAACCTCTAC
CATACAAACCAAACAAACTCTACAAACAACCCTGCACCGAAACGTGATAC
ATGCATGAAAGGTGTGTGGTGGCGTGGACAACCCGACGAAGGCGTTACTC
TGCGACGGGTGCGATGATTGCTATCACATGTACTGCCTCAAGCCTCCGCT
CAAGAAAGCTCCCAAGGGCGAGGTGTGTGTGTGTGTGCGTGCGCGCGGGA
GGCGGGCGGGCGGGCGGGCGCTCTTGCATGTTGATGGAGGTGTATGTTGC
TTTCAAACGTCACTACAGACCCGCGTGCTGCACTCCAATTATGTACCACT
GAATGAAACAACCGTCAAACGTGTTTCTGTAATAATGATGATGATGTTAT
TGGGAATGGTGATGGCTTTTTCCTCTTGAACTAGTTTCGAATCTTTCATC
GCCTATCCAACCTTTTTTTGTATCAAGGTGTCACATGACACGGAATAGGT
TTGACTCTTATAGTGGGGTACGCTTTCAATGTAGCCCCGGCCTGCCCACC
GTACCACTAAATTATGACCTAATCCTCTGTATCTTATTCCCCTCCACAAT
TCACCACATGGACGCAGCCCGCGTTATCGCTTGTACTCGCTCGCCTTGCT
CCTTTTCTTCCATCACTTGAGTCTAATTTTGTTTTATTAGTGTTACAGTA
CACAAGTTACATTTGAGGTCAATCAGGGGCCTAACCTCAAGATAATATTA
GGAGCGTTATAGAACTAATAGCTGTAGCAAGGGCATTGACAGAATGAGGC
ACGTGCGTTGGGTTCCCCCCCCCCCCTACCCCTACCCCTGCCCTCCCCCT
CCCCCTCCCCCCCGAAAACAAACAGTGGTTTTGCCCGAAGTGCGTGAGCA
AGAAGGCTGGCGGCGAGGCCGCAGGCAACAAGGGGAAGAAGGCGCCGTCT
GTGAAGAAGGAAGAGGAAAAGGAGGCGGGCAGCGGTGGTGGTGCGGGGAC
TGAAGGTGGTGGCCGTGGCCGTGTTTCGCTGGGGACGGAGGAGGAGAGAG
AGGCGCTGCGGCTGGCAGCCTTGGCTGTGCTGGAAGAATCGTCGGAGGAC
ATGGATCAAGACCAAGTACGTAGAGTGTCCAGACGCATTCTGAAGCCTGT
AAAAAATTTCAAATTCAAACATAACTTATTTTTCTTCCTGCTTCCTTTTT
ATTCGTCCACGGAAAAATTCCAAGGTTTGTCCAATGTCGCTCTCTGTAGA
TACCTTGCATTGCTTGAAGCACACGTTGTTCCGAACTGTAAATAATTTTC
CGGGAAAGTACGTGGATATGCATTTTTTTCTCGATTTTTTTTTTTTGGTG
TGAAGAAGTCAACAAGTCAAGCTACACTTGTTGCTGCGGAATTGCTATGC
CCCTGCAGTATCAAAATGAGCACACTTCTCTCCGACGGATATCTGCGAGA
GAGAGATGTTTACGGTGACGAAACTTGCGATGTCACTCACGGTGTTGTTT
TGGGAGATGGTTACGTTTGAAGAGAGCCGTCAACGGGACTGCCGGCGGGC
GTTTTAGCACTGGCGCGTAAGAAGAGCGAATTATGGTGTTGGTGTAGTTG
GGCACCTCTTTTTTATGTCCACGCGACGCCCGTGAGGGTGGCAGGTATAT
CTTGTCAAGTAAGTGGTGGGGCGTAGCTTGTATGTCGCAAACCATGTAGT
TTGGCAAGGTTAGGTTGTGTGACTAGTGCGTGTCTCGAAGCTGCAAGCTG
CTGCATACGTAGAGGATATTCACGCAAAAACATTTTCACACGTAGAGCTG
TTCACGACGGACGCGTGGTCTGTATCCGTATTTTGTTGTCTATACAGAGA
GCTGGTGATGGATTACGTAGCATGTGCGGCACCTTCCACAAAAACGTTTT
CTCTCCGATGGGCTTTTTTTTTTTTTTCCCATTTTTCATTTCGGTTTGGT
TCGTTTTCTTTCATGACTCCCATCACTTGGGCAGGCGGCTACCGTGAAAG
AAGACCCTTCCGGCGAAGAGACGGAGTCGGATGCTGACGCCAGGCGACGC
GACCAGGTGCCCGCGAGGATTATATTCTTGAGACAATATTTTGTGTCTTT
TCGTTCCACACCACACCACCCAATAAAACTCCGAAAGAACGACTGTACAT
GATCGCTCCTCTTTCCACAGTGTGTTTGGCGTTATTCTTCAGGAGATGGA
CTTCGTGACAACCGATAGGTGGATATACTGACGGCCTGTCGTGAATAACA
GCGAACACGATTGCAAAATGCTTAATCAGCTCCCCTGCAGCCGGTTGGCA
TATTTTCAGAGGCCAAAGGGGGAAAGTTTTATGTGCCGGTTGTGTTCGTT
GTGGTTTTGGATTGAGTTTCAGTGATAAACGAGAATTAGGACGCAGCGGC
AAAACTAATGCAGGAGCCCTGTACATATCTGCTGAATAGGGGAGACACTG
TGCACGGGCGTTTGTTGAGGGTTTCTAAAAGAGTAGAGCAGGAACTTGAA
GTCTTGATTTGGAGGCGTGTGTGTTTTTATTTTTCTCGTTGTGTGTTGAC
ATAGGGGTGCAAAAATTGCAATTAGTGGCCAATTTGATAAAAAGGAAAGA
TCCGCCCTTGTCGAGTGATTTGCAGGCTACACACTTGGTATGTCTATCTC
TGTTAAGGGGCCCATAGATTGTCACAAGAGCCAAAAACGGGTTCACCATT
TAGTGGGGATATCCACGTGATATATTATATATATATATCCCCCCTCCCCC
TTAATCTTCGCGAAAACAGCGGGTAGCCGAAACGGACGAGCACGAGCCAT
CATCAGACTCGGAATCGGATACTTCAGACAGCAGTGACGTGTGCCTCACG
TGCGGGGAGAGCGGCGACAAGCACAAGATCATGCGGTGTGGCAACTGCGC
GGGCGGTGGCACGGGGCTGGGCATATTCCATTACGACTGCCTCAAACCCC
CCCTCTCCTCGAGACCGCCGCATGACGAGGAGGCAAGTGCACCAAAAGCT
GGATGCTGGGTGACGATATTACGTGACTGTTCGTTGCTAGGTTCTATATA
ATAGTCTCACACACATACATACCCCTGCTGTTGACTTGAGGGTTGGAAAT
GTTTGAGGCCTGTGCTGCAGTACTGAGAGAGTCATTTACGGGGGGGGTTT
GCTTGTTTCTATTCACTTTTATTTTCGGTCCAAGGGTCGATGCTTGTGTA
GTTGCCTATATGTGTTTTTGTTTTGTGCGCTGAGATCGCTGGGCCTAGTT
GGTGTAATATATATTCGTTTCAATCATTTAATCGAATTTGGGAGGAGGAA
ATAAATCCCAAAGGAAGCTACATATGTATGTAGCTGCTGGCAAGCAATAG
AGCTTGTAGATTTTGCTGAAGCTGACCTGTCGTGTGTGGTTGACCGTGAA
TGAGCTTTTCGTGAAAATACTCACCTCTTTTTCCCATGCCCGTGCATGAT
GACCTACCTTTGCGCGAAGTGTCCAAGCCGCCTTCGCTGTACAACCCGAC
TTGACAGTTGATTTAGTATACTCTTGTCTGTAAGGAATTATGTTTATTTT
AGCGTGGCACTGCACAGAACGTAGTTAGCACGCCTAGCCTTAACCTCGCC
AATCGCGTACTTGTGTGTGTACGTTTGCAGAGCGCCCGCGTGTACGTTTG
TTGGTTGATTGGTGATATAGTTACTTGAGTCGTTTCGTCGGTTTGGCGTG
CCGTTGGGTTTTTTTTTAATCCCAATTAAAAAATGAAATTCTACTGAGCT
GTGTTGGTGATGTCGGCTTTGTCTCACGCAAGTATATTTTGGGGTTCCTA
TCTTTACCTTCTCCGGTCCTCTGTTCAAGACTACTGAATTGTCCCCTATA
ACGACAATTACTCCGGGACTGCTGTTGTGTTTTTTTCCTCCCCTACTTGT
TTCTCCTCCCTCCTCAGTGGCTCTGTCCGCGCTGCCTGCAAAAGAAGCGA
AGTGGCAAAGGCAAGGGCAAGCTACCGGCGGGGAGCAACAGAAAGACGGT
AAAAAAAATGCCGCCGTCTCCATCACCGTCCGCGAGTGCGGGAAGCTCAA
AGCGCAAATCGCTGACTTCAGGAGGCTCGTCACAGCAGCAACAACAGAAG
AAGAAGAAAAATAAGTAGGGAGAGGAGAGGAGAGGAGAGGTAGAGATGGG
GG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7182:2961..11212- >mRNA_H-paniculata_contig7182.15159.1 ID=mRNA_H-paniculata_contig7182.15159.1|Name=mRNA_H-paniculata_contig7182.15159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2862bp|location=Sequence derived from alignment at H-paniculata_contig7182:2961..11212- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGATGAGATGATGAGAGAAGCCGCCGCGAACGGCAGCGTGTCCTCTGGC GATGGCGTGCGGGATGGTGCGAAGGTGGAGCTGGATAACCACGGGAAATT TCCTGGGGGAAGCCTGGATTTGTTTCTCGGGACGACCGGGCGCCGAGCGA AGGAGTCGGCGAAGGAAAGAATCAAGCAGGATTCCACATGGACGGTTGCG AAGGCCTTGCGGATGAGAAGCCGCCGCGAACGGCAGCGTGTCCTCTGGCG ATGGCGTGCGGGATGGTGCGAAGGTGGAGCTGGATAACCACGGGAAATTT CCTGGGGGAAGCCTGGATTTGTTTCTCGGGACGACCGGGCGCCGAGCGAA GGAGTCGGCGAAGGAAAGAATCAAGCAGGATTCCACATGGACGGTTGCGA AGGCCTTGCGGATGGCGGATGGTAAGAATGGTAGCTCCGGTGTTGGGTCA TCTTCCAAAGACAAGGTCAAGGAGGACCAGAAGGAGAAGAACAAGGTTGC GCCATCAACAGCCGGAGCAGGGAAGAAGCAGAAACAGCAGGGCAATGGTG ATGGTGGGGGCGGCGGCGGCGGAAATTCTGACTGTGACATTGTCGTAGGT GGCAGTGGCGATGGCGGCAAGCAGAAGGGAGGGGGGGGCAAGAGGCAGCA GGGTAACGGTAAGGCCGGGGACAAGAAGGACAAGTTAGAAAGAGAGATGA CTGATGATGGGGACGGGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACAAG GGAGAAGGGAGTGGTTCCGAGGAGGACGACGATGATGATGAGCCGTGCCA GGCGGATGGTAAGAATGGTAGCTCCGGTGTTGGGTCATCTTCCAAAGACA AGGTCAAGGAGGACCAGAAGGAGAAGAACAAGGTTGCGCCATCAACAGCC GGAGCAGGGAAGAAGCAGAAACAGCAGGGCAATGGTGATGGTGGGGGCGG CGGCGGCGGAAATTCTGACTGTGACATTGTCGTAGGTGGCAGTGGCGATG GCGGCAAGCAGAAGGGAGGGGGGGGCAAGAGGCAGCAGGGTAACGGTAAG GCCGGGGACAAGAAGGACAAGTTAGAAAGAGAGATGACTGATGATGGGGA CGGGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACAAGGGAGAAGGGAGTG GTTCCGAGGAGGACGACGATGATGATGAGCCGTGCCAGGTGTGTGGTGGC GTGGACAACCCGACGAAGGCGTTACTCTGCGACGGGTGCGATGATTGCTA TCACATGTACTGCCTCAAGCCTCCGCTCAAGAAAGCTCCCAAGGGCGAGG TGTGTGGTGGCGTGGACAACCCGACGAAGGCGTTACTCTGCGACGGGTGC GATGATTGCTATCACATGTACTGCCTCAAGCCTCCGCTCAAGAAAGCTCC CAAGGGCGAGTGGTTTTGCCCGAAGTGCGTGAGCAAGAAGGCTGGCGGCG AGGCCGCAGGCAACAAGGGGAAGAAGGCGCCGTCTGTGAAGAAGGAAGAG GAAAAGGAGGCGGGCAGCGGTGGTGGTGCGGGGACTGAAGGTGGTGGCCG TGGCCGTGTTTCGCTGGGGACGGAGGAGGAGAGAGAGGCGCTGCGGCTGG CAGCCTTGGCTGTGCTGGAAGAATCGTCGGAGGACATGGATCAAGACCAA TGGTTTTGCCCGAAGTGCGTGAGCAAGAAGGCTGGCGGCGAGGCCGCAGG CAACAAGGGGAAGAAGGCGCCGTCTGTGAAGAAGGAAGAGGAAAAGGAGG CGGGCAGCGGTGGTGGTGCGGGGACTGAAGGTGGTGGCCGTGGCCGTGTT TCGCTGGGGACGGAGGAGGAGAGAGAGGCGCTGCGGCTGGCAGCCTTGGC TGTGCTGGAAGAATCGTCGGAGGACATGGATCAAGACCAAGCGGCTACCG TGAAAGAAGACCCTTCCGGCGAAGAGACGGAGTCGGATGCTGACGCCAGG CGACGCGACCAGGCGGCTACCGTGAAAGAAGACCCTTCCGGCGAAGAGAC GGAGTCGGATGCTGACGCCAGGCGACGCGACCAGCGGGTAGCCGAAACGG ACGAGCACGAGCCATCATCAGACTCGGAATCGGATACTTCAGACAGCAGT GACGTGTGCCTCACGTGCGGGGAGAGCGGCGACAAGCACAAGATCATGCG GTGTGGCAACTGCGCGGGCGGTGGCACGGGGCTGGGCATATTCCATTACG ACTGCCTCAAACCCCCCCTCTCCTCGAGACCGCCGCATGACGAGGAGCGG GTAGCCGAAACGGACGAGCACGAGCCATCATCAGACTCGGAATCGGATAC TTCAGACAGCAGTGACGTGTGCCTCACGTGCGGGGAGAGCGGCGACAAGC ACAAGATCATGCGGTGTGGCAACTGCGCGGGCGGTGGCACGGGGCTGGGC ATATTCCATTACGACTGCCTCAAACCCCCCCTCTCCTCGAGACCGCCGCA TGACGAGGAGTGGCTCTGTCCGCGCTGCCTGCAAAAGAAGCGAAGTGGCA AAGGCAAGGGCAAGCTACCGGCGGGGAGCAACAGAAAGACGGTAAAAAAA ATGCCGCCGTCTCCATCACCGTCCGCGAGTGCGGGAAGCTCAAAGCGCAA ATCGCTGACTTCAGGAGGCTCGTCACAGCAGCAACAACAGAAGAAGAAGA AAAATAAGTAGTGGCTCTGTCCGCGCTGCCTGCAAAAGAAGCGAAGTGGC AAAGGCAAGGGCAAGCTACCGGCGGGGAGCAACAGAAAGACGGTAAAAAA AATGCCGCCGTCTCCATCACCGTCCGCGAGTGCGGGAAGCTCAAAGCGCA AATCGCTGACTTCAGGAGGCTCGTCACAGCAGCAACAACAGAAGAAGAAG AAAAATAAGTAG back to top
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