prot_H-paniculata_contig71399.15116.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig71399.15116.1
Unique Nameprot_H-paniculata_contig71399.15116.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig71399.15116.1 vs. uniprot
Match: A0A0J7K098_LASNI (Gag-int-pol protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K098_LASNI)

HSP 1 Score: 53.5 bits (127), Expect = 6.630e-7
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    4 ACDITNMSCTSSIEGNVTPYEKWYGKTAPLEHLQPFGTVGY--MRKIITEHKMAPRGEKCIMLGISHN 69
            A  + N S TSS++GNVTP E +YG    L++L+ F  + Y  + K   E K   +GE CIM+G +HN
Sbjct:   30 AAYLINRSLTSSLKGNVTPAEMFYGNKPNLKNLKIFRCLAYYCIPKQRLEGKFNSKGEACIMIGYTHN 97
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BLAST of mRNA_H-paniculata_contig71399.15116.1 vs. uniprot
Match: A0A537JHP3_9BACT (DDE-type integrase/transposase/recombinase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A537JHP3_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 8.040e-5
Identity = 20/62 (32.26%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    4 ACDITNMSCTSSIEGNVTPYEKWYGKTAPLEHLQPFGTVGYMRKIITEHKMAPRGEKCIMLG 65
            A  + N   TSS++GN++P+E W+G    ++HL+ FG + + +    + K+  R  +C  LG
Sbjct:  379 AAKVRNRLPTSSLKGNISPHEAWFGVAPSIQHLRVFGCLAFYKITHPKTKVQSRCRRCCFLG 440
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71399.15116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0J7K098_LASNI6.630e-742.65Gag-int-pol protein n=1 Tax=Lasius niger TaxID=677... [more]
A0A537JHP3_9BACT8.040e-532.26DDE-type integrase/transposase/recombinase n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig71399contigH-paniculata_contig71399:405..635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig71399.15116.1mRNA_H-paniculata_contig71399.15116.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig71399 405..650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig71399.15116.1 ID=prot_H-paniculata_contig71399.15116.1|Name=mRNA_H-paniculata_contig71399.15116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MNYACDITNMSCTSSIEGNVTPYEKWYGKTAPLEHLQPFGTVGYMRKIIT
EHKMAPRGEKCIMLGISHNHPSGTIRV
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