prot_H-paniculata_contig71029.15070.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.160e-7 Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSLRSIPMVQPLQKP-------LVRE----TRSLTTDEQLQLQWSDIQDSLSLTSP 106
D LS + + ++Y+PG+ N A +SRLP+PAT++DE R+ DP ++ V +G SG+ P+ L + + +V E + SLTTDE W+ IQ +++P
Sbjct: 220 DFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMIGASGVIPSRLGPVYTEREALAGSNHRDDFVVGEGGCTSASLTTDELADKTWALIQRGKDVSNP 335
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.290e-7 Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSLRSIPMVQPLQKP-------LVRE----TRSLTTDEQLQLQWSDIQDSLSLTSP 106
D LS + + ++Y+PG+ N A +SRLP+PAT++DE R+ DP ++ V +G SG+ P+ L + + +V E + SLTTDE W+ IQ +++P
Sbjct: 220 DFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMIGASGVIPSRLGPVYTEREALAGSNHRDDFVVGEGGCTSASLTTDELADKTWALIQRGKDVSNP 335
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5JJN6_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN6_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 6.780e-7 Identity = 37/116 (31.90%), Postives = 61/116 (52.59%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSLRSIPMVQPLQKP-------LVRET----RSLTTDEQLQLQWSDIQDSLSLTSP 106
D LS + + ++Y+PG+ N A +SRLP+PAT++DE R+ DP ++ V + SG+ P+ L + + +V E+ SLTTDE W+ IQ +++P
Sbjct: 220 DFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMINASGVLPSRLDPVYTEREALAGSNHRDDFVVGESGCTPASLTTDELADKTWALIQRGKGVSNP 335
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5JWI6_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI6_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.190e-6 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSLRSIPMV 70
D LS + ++Y+PG+ N A +SRLP+PAT++DE R+ DP ++ V +G SG+ P+ RS P++
Sbjct: 306 DFLSAYTHELKYRPGRENANADLMSRLPLPATKEDEAPYVRLTDPPDLDVYMIGASGVLPS--RSGPVI 372
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5K4J2_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J2_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.910e-6 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSLRSIPMVQPL-------QKPLVRET----RSLTTDEQLQLQWSDIQDSLSLTSP 106
D LS ++Y+PG+ N A +SRLP+PAT++DE R+ DP ++ V +G SG+ P+ L + + +V E+ SLTTDE W+ IQ +++P
Sbjct: 127 DCLSACTNKLKYRPGRDNANADLMSRLPLPATKEDEAPDARLTDPSDLDVYMIGASGVLPSRLGPVYTEREALAGSNHRDDVVVGESGCTPASLTTDELADKTWALIQRGKGVSNP 242
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Match: A0A6H5KN45_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN45_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 1.090e-5 Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 3 DILSQFQFNMRYKPGKRNQLAGALSRLPVPATEDDENA-CRMLDPHEVTVCFVGRSGITPTSL 64
D LS + + ++Y+PG+ N +SRLP+PAT++DE R+ P ++ V +G SG+ P+ L
Sbjct: 403 DFLSAYTYKLKYRPGRENANVDLMSRLPLPATKEDEAPDVRLTGPSDLDVHMIGASGVLPSRL 465 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71029.15070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig71029.15070.1 ID=prot_H-paniculata_contig71029.15070.1|Name=mRNA_H-paniculata_contig71029.15070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bpback to top |