prot_H-paniculata_contig710.15062.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig710.15062.1
Unique Nameprot_H-paniculata_contig710.15062.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length248
Homology
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A836CJG7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG7_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-8
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  177 QRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 233
            Q R + RKLLL  +S     GE+VAV+GASGAGKST LDL+AGRK +GF AG +  N
Sbjct:  101 QTRDRSRKLLLHDISFEARPGEMVAVMGASGAGKSTLLDLIAGRKQEGFVAGTIAFN 157          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.210e-8
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0
Query:  179 RQQQRKLLLRGVSCRVCAGELVAVI------------------------------GASGAGKSTFLDLLAGRKLDGFCAGQVLL 232
            R++++++L +GV+CR CAG++VAVI                              GASGAGKSTFLDLLAG+K +G CAGQ+LL
Sbjct:  157 REKKKRVLTQGVNCRFCAGDMVAVIVSLSHAWRSAVGGRLGRRQAACMKTAAQQAGASGAGKSTFLDLLAGKKKEGECAGQILL 240          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: I1J3V9_BRADI (ABC transporter domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1J3V9_BRADI)

HSP 1 Score: 60.8 bits (146), Expect = 5.160e-7
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  180 QQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQRER 243
            QQ+R+L+LR V+CR   GEL+A++G SGAGKST L++LAGR       G++ +N G   A R R
Sbjct:   58 QQRRRLVLRDVTCRARPGELLAIVGPSGAGKSTLLEILAGRLHPTTTCGELRVNGGAVDAARLR 121          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A5P1END7_ASPOF (ABC transporter domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1END7_ASPOF)

HSP 1 Score: 59.3 bits (142), Expect = 1.970e-6
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0
Query:  152 DLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 233
            D+RY +D+P   ++++TGD          Q R  LL+G+S     G L A++G SGAGK+T +D+LAGRK  G+  G + +N
Sbjct:  698 DIRYSVDMP-QEMKAQTGD----------QARLELLKGISGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNICIN 768          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: D8LSM2_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM2_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.210e-6
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:  199 LVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLL 232
            +VAVIGASGAGKSTFLDLLAG+K +G CAGQ+LL
Sbjct:    1 MVAVIGASGAGKSTFLDLLAGKKKEGECAGQILL 34          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A843VMA0_COLES (ABC transporter domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VMA0_COLES)

HSP 1 Score: 58.9 bits (141), Expect = 2.230e-6
Identity = 36/83 (43.37%), Postives = 46/83 (55.42%), Query Frame = 0
Query:  163 AIRSKTGDLRRRRWQR--RQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQRER 243
            A+    GDL  RRW R       K +LR V+C    GE++ ++G SGAGK+T L +LAG    G  AG+VLLN  Q    R R
Sbjct:   27 ALPPSVGDLCWRRWYRVHADHHGKPILRNVTCEALPGEIMGIVGPSGAGKTTLLSVLAGAAHPGRVAGEVLLNGVQMDVVRFR 109          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A316Z4Z1_9BASI (Uncharacterized protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z4Z1_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 2.570e-6
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:  184 KLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 233
            KL+L G+S  V  G+++A++GASGAGKSTFLDLLAGR   G  +G+VL+N
Sbjct:  407 KLVLDGISGTVKPGQVMAIVGASGAGKSTFLDLLAGRNKRGSSSGRVLVN 456          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: UPI000A37AF94 (ABC transporter ATP-binding protein n=1 Tax=Oceanospirillum sanctuarii TaxID=1434821 RepID=UPI000A37AF94)

HSP 1 Score: 57.0 bits (136), Expect = 4.470e-6
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query:  186 LLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQREREG 245
            +L+GV+C++ AGE VA++G+SGAGKST L LLAG  LD    G++ LND Q  +Q + EG
Sbjct:   40 ILQGVNCQIYAGESVAILGSSGAGKSTLLGLLAG--LDQASGGEIWLND-QPMSQLDEEG 96          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: UPI0009E3E7DD (LOW QUALITY PROTEIN: ABC transporter G family member 36-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3E7DD)

HSP 1 Score: 58.2 bits (139), Expect = 4.850e-6
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0
Query:  153 LRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 233
            +RY +D+P         D++    Q  Q+ R  LLRG+S     G L A++G SGAGK+T +DLLAGRK DG+  G +L+N
Sbjct:  862 IRYSVDMP--------QDIKA---QGVQEDRLELLRGLSGSFRPGVLTALMGVSGAGKTTLMDLLAGRKTDGYTEGSILIN 931          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A6D2JN68_9BRAS (ABC transporter domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JN68_9BRAS)

HSP 1 Score: 57.8 bits (138), Expect = 5.680e-6
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  184 KLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 233
            K LL GVS + C G++VAV+GASGAGKST +D LAGR  +G   G V LN
Sbjct:   83 KTLLDGVSGQACDGDIVAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLN 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJG7_9STRA1.090e-859.65P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5KKK8_9PHAE3.210e-844.05ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
I1J3V9_BRADI5.160e-750.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A5P1END7_ASPOF1.970e-640.24ABC transporter domain-containing protein n=2 Tax=... [more]
D8LSM2_ECTSI2.210e-682.35ABC transporter domain-containing protein n=1 Tax=... [more]
A0A843VMA0_COLES2.230e-643.37ABC transporter domain-containing protein n=1 Tax=... [more]
A0A316Z4Z1_9BASI2.570e-660.00Uncharacterized protein n=1 Tax=Tilletiopsis washi... [more]
UPI000A37AF944.470e-653.33ABC transporter ATP-binding protein n=1 Tax=Oceano... [more]
UPI0009E3E7DD4.850e-643.21LOW QUALITY PROTEIN: ABC transporter G family memb... [more]
A0A6D2JN68_9BRAS5.680e-660.00ABC transporter domain-containing protein n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 104..244
e-value: 6.3E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR19241:SF294coord: 147..243
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 147..243
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 187..241
e-value: 1.5E-7
score: 32.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 182..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig710contigH-paniculata_contig710:1504..4934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig710.15062.1mRNA_H-paniculata_contig710.15062.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig710 1504..5072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig710.15062.1 ID=prot_H-paniculata_contig710.15062.1|Name=mRNA_H-paniculata_contig710.15062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MDVSETSSSSSLPESLNSDLLSPLSVQESSSQASQPPSFLGTSTPTTPSG
DNNDYGNNHNTNSERYTQIRTALLEAEGNLFGYSALKEEARAVSRSGLLD
EVDRMALTASSDTDDVSTAAAGAQAASYTIHKHESGRSAEQVDEEILCEV
TDLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELV
AVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQREREGGGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase