mRNA_H-paniculata_contig710.15062.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig710.15062.1
Unique NamemRNA_H-paniculata_contig710.15062.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.740e-8
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query:  673 RQQQRKLLLRGVSCRVCAGELVAVI------------------------------GASGAGKSTFLDLLAGRKLDGFCAGQVLL 834
            R++++++L +GV+CR CAG++VAVI                              GASGAGKSTFLDLLAG+K +G CAGQ+LL
Sbjct:  157 REKKKRVLTQGVNCRFCAGDMVAVIVSLSHAWRSAVGGRLGRRQAACMKTAAQQAGASGAGKSTFLDLLAGKKKEGECAGQILL 240          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: D8LSM2_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM2_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.550e-6
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 1
Query:  733 LVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLL 834
            +VAVIGASGAGKSTFLDLLAG+K +G CAGQ+LL
Sbjct:    1 MVAVIGASGAGKSTFLDLLAGKKKEGECAGQILL 34          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A5P1END7_ASPOF (ABC transporter domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1END7_ASPOF)

HSP 1 Score: 59.3 bits (142), Expect = 3.780e-6
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  592 DLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 837
            D+RY +D+P   ++++TGD          Q R  LL+G+S     G L A++G SGAGK+T +D+LAGRK  G+  G + +N
Sbjct:  698 DIRYSVDMP-QEMKAQTGD----------QARLELLKGISGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNICIN 768          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A316Z4Z1_9BASI (Uncharacterized protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z4Z1_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 4.880e-6
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query:  688 KLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 837
            KL+L G+S  V  G+++A++GASGAGKSTFLDLLAGR   G  +G+VL+N
Sbjct:  407 KLVLDGISGTVKPGQVMAIVGASGAGKSTFLDLLAGRNKRGSSSGRVLVN 456          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: UPI0009E3E7DD (LOW QUALITY PROTEIN: ABC transporter G family member 36-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3E7DD)

HSP 1 Score: 58.2 bits (139), Expect = 9.170e-6
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  595 LRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 837
            +RY +D+P         D++    Q  Q+ R  LLRG+S     G L A++G SGAGK+T +DLLAGRK DG+  G +L+N
Sbjct:  862 IRYSVDMP--------QDIKA---QGVQEDRLELLRGLSGSFRPGVLTALMGVSGAGKTTLMDLLAGRKTDGYTEGSILIN 931          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A507CYE2_9FUNG (ABC transporter domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CYE2_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 4.430e-5
Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 1
Query:  592 DLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 837
            DL Y IDVP  A    T    + R+ R++   K +L+GVS     G L AV+GASGAGK++ L +LAG    G   GQ+L+N
Sbjct:   47 DLAYSIDVPAPA----TVVASQPRFARKRMMSKPILKGVSGVFKPGRLCAVMGASGAGKTSLLQVLAGEARSGEVQGQILIN 124          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A2N5UL68_9BASI (Uncharacterized protein n=3 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5UL68_9BASI)

HSP 1 Score: 55.8 bits (133), Expect = 4.940e-5
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1
Query:  688 KLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSS 852
            K +LR VS +  +G+L+A++GASGAGKS+ LD+LA +   GF AG +L+ND Q S
Sbjct:  419 KPVLRQVSGKAKSGQLLAIMGASGAGKSSLLDILAKKSKSGFVAGDILVNDMQIS 473          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A7S1MMI7_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MMI7_NEODS)

HSP 1 Score: 55.5 bits (132), Expect = 5.930e-5
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  529 HKHESGRSAEQVDEEILCEVTDLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLN 837
            H+H+S     +V         DL YE+++P      KT +++R            +L GVS  V AG+++A++G SGAGK+T LD+LA R+  G   G++L+N
Sbjct:   57 HQHDSSAGKPRVS----LSFKDLVYEVELP------KTKEIKR------------ILNGVSGHVHAGQMMAILGPSGAGKTTMLDILAQRQKGGTVTGELLMN 137          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: A0A5C2HWT9_9GAMM (ABC transporter ATP-binding protein n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HWT9_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 6.360e-5
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 1
Query:  682 QRKLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAG 795
            QR LLL+GVSCRV AGE+VA++G +GAGKST L LLAG
Sbjct:   12 QRTLLLQGVSCRVGAGEMVALVGPNGAGKSTLLKLLAG 49          
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Match: I2G2K7_USTH4 (Related to ABC transporter protein n=2 Tax=Ustilago TaxID=5269 RepID=I2G2K7_USTH4)

HSP 1 Score: 55.5 bits (132), Expect = 6.620e-5
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  688 KLLLRGVSCRVCAGELVAVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQ 858
            K LL G++  V  GE+VA++GASGAGK+TFLD+LA R+  G  +G VL+N  + S Q
Sbjct:  418 KALLDGITGSVKPGEVVAIVGASGAGKTTFLDILARREKRGVTSGTVLVNGRKMSNQ 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig710.15062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KKK8_9PHAE6.740e-844.05ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSM2_ECTSI3.550e-682.35ABC transporter domain-containing protein n=1 Tax=... [more]
A0A5P1END7_ASPOF3.780e-640.24ABC transporter domain-containing protein n=2 Tax=... [more]
A0A316Z4Z1_9BASI4.880e-660.00Uncharacterized protein n=1 Tax=Tilletiopsis washi... [more]
UPI0009E3E7DD9.170e-643.21LOW QUALITY PROTEIN: ABC transporter G family memb... [more]
A0A507CYE2_9FUNG4.430e-543.90ABC transporter domain-containing protein n=2 Tax=... [more]
A0A2N5UL68_9BASI4.940e-552.73Uncharacterized protein n=3 Tax=Puccinia coronata ... [more]
A0A7S1MMI7_NEODS5.930e-534.95Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A5C2HWT9_9GAMM6.360e-573.68ABC transporter ATP-binding protein n=1 Tax=Ectoth... [more]
I2G2K7_USTH46.620e-552.63Related to ABC transporter protein n=2 Tax=Ustilag... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig710contigH-paniculata_contig710:1504..5072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score60.8
Seed ortholog evalue1e-06
Seed eggNOG ortholog15368.BRADI5G27650.1
KEGG koko:K05681
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0042623,GO:0042626,GO:0043492,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
EggNOG free text desc.ABC-2 type transporter
EggNOG OGs37M59@33090,3GCNF@35493,3I4J1@38820,3KXG9@4447,COG1131@1,KOG0061@2759
COG Functional cat.Q
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Exons3
Model size882
Cds size744
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig710.15062.1prot_H-paniculata_contig710.15062.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig710 1504..4934 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930857.7317371-CDS-H-paniculata_contig710:1503..16381622930857.7317371-CDS-H-paniculata_contig710:1503..1638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 1504..1638 -
1691481483.988567-CDS-H-paniculata_contig710:1503..16381691481483.988567-CDS-H-paniculata_contig710:1503..1638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 1504..1638 -
1622930857.7470806-CDS-H-paniculata_contig710:3857..40311622930857.7470806-CDS-H-paniculata_contig710:3857..4031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 3858..4031 -
1691481484.0051818-CDS-H-paniculata_contig710:3857..40311691481484.0051818-CDS-H-paniculata_contig710:3857..4031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 3858..4031 -
1622930857.761327-CDS-H-paniculata_contig710:4499..49341622930857.761327-CDS-H-paniculata_contig710:4499..4934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 4500..4934 -
1691481484.0183136-CDS-H-paniculata_contig710:4499..49341691481484.0183136-CDS-H-paniculata_contig710:4499..4934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig710 4500..4934 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930857.7728467-UTR-H-paniculata_contig710:4934..50721622930857.7728467-UTR-H-paniculata_contig710:4934..5072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig710 4935..5072 -
1691481484.02901-UTR-H-paniculata_contig710:4934..50721691481484.02901-UTR-H-paniculata_contig710:4934..5072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig710 4935..5072 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig710.15062.1

>prot_H-paniculata_contig710.15062.1 ID=prot_H-paniculata_contig710.15062.1|Name=mRNA_H-paniculata_contig710.15062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MDVSETSSSSSLPESLNSDLLSPLSVQESSSQASQPPSFLGTSTPTTPSG
DNNDYGNNHNTNSERYTQIRTALLEAEGNLFGYSALKEEARAVSRSGLLD
EVDRMALTASSDTDDVSTAAAGAQAASYTIHKHESGRSAEQVDEEILCEV
TDLRYEIDVPVTAIRSKTGDLRRRRWQRRQQQRKLLLRGVSCRVCAGELV
AVIGASGAGKSTFLDLLAGRKLDGFCAGQVLLNDGQSSAQREREGGGG
back to top

mRNA from alignment at H-paniculata_contig710:1504..5072-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig710.15062.1 ID=mRNA_H-paniculata_contig710.15062.1|Name=mRNA_H-paniculata_contig710.15062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3569bp|location=Sequence derived from alignment at H-paniculata_contig710:1504..5072- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTACTAATTTGACCGCGGGTCCCATACTACATCAACGAGGTGTGACGCA TTCGCCGACGTCAACCCGTATTTCCGTGCACAGAGGACGCTCCTCTCTAC TCGCTCTGCGCTCTGCAAGCGTGAGTTGACACTTGTGCATGGACGTGAGT GAGACGTCTTCTTCCTCATCTCTCCCCGAATCTCTCAACAGCGATCTTCT GAGCCCTCTCAGCGTCCAAGAGTCCTCGTCTCAAGCAAGCCAACCTCCCA GCTTCTTAGGCACGTCGACGCCGACAACCCCATCAGGTGACAACAACGAC TACGGTAATAACCACAACACCAATAGCGAGAGGTATACGCAGATAAGGAC AGCGTTGCTTGAGGCAGAGGGAAATCTCTTCGGCTACTCCGCTCTAAAGG AAGAAGCACGTGCAGTGAGTAGGAGCGGTCTTTTAGACGAAGTTGACAGG ATGGCGCTGACAGCGAGCTCAGATACTGACGATGTCTCGACGGCGGCTGC GGGGGCACAAGCTGCCTCTTACACCATCCACAAACATGAGAGTGGCCGGT CGGCGGAACAAGTGGATGAGGAGGTGACCTTGGCTTGCACGCCCTGCGTG TTTCTCTTGTGTTTAGCTACTTGGTGCTGTACGGCTGAAACGGTAGCTAT AACAGACATTGCAGCAAGAAGTGTCGACTACCTCTCACCAAAGTAGCTAC AGTTGTTGCGCAATTGTACAGATGCGAATATATCTTGCACTGAAAGGTAC AGACCGTACAAATGGGAAGTTACACCCAGCTGTGCTAGCCGCTCACTTCG CGCTGACTCTGCAGGTAGTTATGCGCGAGTACTCTGCCTACTGCCTGTTT CGTGGTCATTCCTCAGCTGCTGCAATGCGGCACGTGGACGGCAGTATTGG TACCTACCTAGCGGTTTGCACCTCTGATCGCCGTTCCTTTTGTACCGGGA ACGTTGTAGCCGTATTTCCCCCGCACAGCTCAGCTGACACTGCTGTATCC CCTCATGTCCATGTCCGCCCCGATGACGCCTCATGCCGCAGATCTTGTGC GAGGTCACCGATCTTCGCTACGAAATCGACGTGCCCGTAACAGCAATCAG GAGTAAGACAGGGGATTTGCGACGGCGGCGGTGGCAGCGGCGGCAGCAGC AGCGGAAATTGCTGCTGCGAGGCGTAAGCTGTCGAGTCTGCGCGGGAGAA TTGGTGGCGGTCATTGTGAGTTTCGTGTTTTTCTGTCGGATGTTGGTATT TTTAATCAAGGCTGCAGGGACAGTTATAGCTATATACGAGTGCTACATAG CTTACATATCCACCAGTAGAGATCAAGAGCATACACACAGAGCAGTAAAC ATTTTATGGGGTAAGTCAAATCCCGGTTCCTGGAGAAGGAAGACCTTGAC TGCCCAACACTACCCAGCACTGCTGAGCACGTCCATCGAACGTCGACAGA TCTGGAAAATATCTTTTCAGTGACATTCATTTCGCATATGTGATTGAAGT GGCTCGAACGGTTGTGTGACTTGTCGCTTTGGTCTGTACAGGTGATGCGG TGTACTTGCATGAACCCTCTTGTTAATATACCGTCTGTTCGACAGACGGG TGTCGTGATACCATAGTAAAGTAGGCTCACGCAATCCCGTTTCATCGCCA TGGTATAGTGGGATGACACGTGGCAGTTCAACTGACATCACTGGCCTCAG CAAGTACGAGTTCATTTCTGTGAATTCCTTCGAAAACGATGTATTGGATA TGAGTCAGATCGATACACAATTATAGTTATCACGGAGTGGGATCAAATGG GACGTGAATTGGTCCCGTCTTCCCAAGAAAACGTTAAGAGCATATGTTGG TTAATCCTTTTAGCACCAGAAAAGGGAGGAAGAGAGAGAGGCTGCTTCGG AACAAAAAGTGCATCTCACTACAAATGAGCGCTGCAATCTATCCCTGTGG GCAGTAGCACCGTGCCTATTACCTGCCGCTCGGTGCTGTATGTACTCTGT CTATATAAAACTTACTGATTCAACGGCGACGGCTCCCTGTCTGCACAAGC ATGCCCTATTGACTCCTCTTGTATTTCTGGGCCAGGGGTTAAGCGGAGAT TATTTACACGGGACCCGGCTCTGAAAGGGCTTAATGTTATCATTTAGGTC GTTTTACTCAGGCCACGAGATGAGTCCTATTCCTACAGTCACTTATGGAG GTAGGCTGTGCTGGTTTTTCACCACTATGTACCTGGTCATGTGTTCTACT GGATATAGCGTGGTGTGTTGTTCCGAACCAGGAGAAGTTTTTTATGGTGG TGATGCCCCTGCTCTTCACATGTGAGAGCGCGTGCTGGTTGTATAATAAG CATACTAATGATCATGCTATAATACATTCATAAAAAAAAAATTGGATATT TGTTACCCGTTACCTCGTTACCCCTTCACTAGATTTATTGTTTATTCACT GGAGCTAACGGATACACTCATTACATACCTCCTTGTACTTAACACAGTTT CAGACAGTTGAGTGATGATGCATACATGCACAGCTGTGTAGAAACATAGG CCTCTCCATAACGGCAGCATGGTGAATGACTATATATATATATATATATA TATATATATATATAATTACTACCTCCTATTTACTTCACTACCTCTTAAAG ATCTAAATTTTCTGTTGAGTGTAAGTACCTGAAGTTTAAAGTCAGCTCAA TGACTTCAACATGCGGGGAGTGGAGTTGGTTTATGAGCTTCAGCGCTATA CTTACAACGCACTATTGCAGGGTGATTTACGAGTGAAAATAAATCAGGGG TGTCATTCTGTCGTTCATTTAAAAAAAACTACTTCATGTTACACTTACAG TATACATGCGAGCGGGACAGTGATACGCCCTTATGAATACTATCGTAGCC CATGTCGTGTGTGGTCGAAGGTGCGTGAAGCACTGGTACTTGGTCATGAT GGGGTCAGAATTTGATGCGGTGTGAACAGTCTCCTTCCGGTGTACCATGC AGTATACTACCCAAATACCCGTCCAGTCCAGTCGAAATTCGATTCACCTG GTGGGCATGCGTGGTTTATTGTGAATGGACTGTAGCAGTGTGGAAGCACT TGTTACGTACATCTCTCTCAGCATGGTAGCCTCCAAGATCGCACAATGGG GTTAGCCAGGTCCCGGGCTATGGGCTACCGCTCCAAAATATGAGTACACC GTGCATACAAGAGGGCTGCACAATGAGTGTTAATCCTCTGTTTGTTGTCC GTTGTATCGTAATATGCTTTGATGGTTGTACTGCAGTCAAAGCTCTTCGG CTATACCTATTGGTCATAAGAACTACCATACATTAATGTTAAACGAGTTT TTGAGTTTTCGACATGAAAATATGATAACTGCTATCCGCCCCCACCCCCC ACCCCTTGACCGCCCCCGCATATTTCTTCCGTAGGGAGCCTCCGGTGCCG GAAAGTCGACATTTCTTGACCTGTTGGCCGGGCGAAAATTGGACGGCTTT TGCGCAGGCCAAGTCCTACTCAACGACGGACAATCCTCGGCGCAGCGAGA GCGAGAAGGAGGCGGGGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig710:1504..5072-

>mRNA_H-paniculata_contig710.15062.1 ID=mRNA_H-paniculata_contig710.15062.1|Name=mRNA_H-paniculata_contig710.15062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at H-paniculata_contig710:1504..5072- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGTGAGTGAGACGTCTTCTTCCTCATCTCTCCCCGAATCTCTCAA
CAGCGATCTTCTGAGCCCTCTCAGCGTCCAAGAGTCCTCGTCTCAAGCAA
GCCAACCTCCCAGCTTCTTAGGCACGTCGACGCCGACAACCCCATCAGGT
GACAACAACGACTACGGTAATAACCACAACACCAATAGCGAGAGGTATAC
GCAGATAAGGACAGCGTTGCTTGAGGCAGAGGGAAATCTCTTCGGCTACT
CCGCTCTAAAGGAAGAAGCACGTGCAGTGAGTAGGAGCGGTCTTTTAGAC
GAAGTTGACAGGATGGCGCTGACAGCGAGCTCAGATACTGACGATGTCTC
GACGGCGGCTGCGGGGGCACAAGCTGCCTCTTACACCATCCACAAACATG
AGAGTGGCCGGTCGGCGGAACAAGTGGATGAGGAGATGGACGTGAGTGAG
ACGTCTTCTTCCTCATCTCTCCCCGAATCTCTCAACAGCGATCTTCTGAG
CCCTCTCAGCGTCCAAGAGTCCTCGTCTCAAGCAAGCCAACCTCCCAGCT
TCTTAGGCACGTCGACGCCGACAACCCCATCAGGTGACAACAACGACTAC
GGTAATAACCACAACACCAATAGCGAGAGGTATACGCAGATAAGGACAGC
GTTGCTTGAGGCAGAGGGAAATCTCTTCGGCTACTCCGCTCTAAAGGAAG
AAGCACGTGCAGTGAGTAGGAGCGGTCTTTTAGACGAAGTTGACAGGATG
GCGCTGACAGCGAGCTCAGATACTGACGATGTCTCGACGGCGGCTGCGGG
GGCACAAGCTGCCTCTTACACCATCCACAAACATGAGAGTGGCCGGTCGG
CGGAACAAGTGGATGAGGAGATCTTGTGCGAGGTCACCGATCTTCGCTAC
GAAATCGACGTGCCCGTAACAGCAATCAGGAGTAAGACAGGGGATTTGCG
ACGGCGGCGGTGGCAGCGGCGGCAGCAGCAGCGGAAATTGCTGCTGCGAG
GCGTAAGCTGTCGAGTCTGCGCGGGAGAATTGGTGGCGGTCATTATCTTG
TGCGAGGTCACCGATCTTCGCTACGAAATCGACGTGCCCGTAACAGCAAT
CAGGAGTAAGACAGGGGATTTGCGACGGCGGCGGTGGCAGCGGCGGCAGC
AGCAGCGGAAATTGCTGCTGCGAGGCGTAAGCTGTCGAGTCTGCGCGGGA
GAATTGGTGGCGGTCATTGGAGCCTCCGGTGCCGGAAAGTCGACATTTCT
TGACCTGTTGGCCGGGCGAAAATTGGACGGCTTTTGCGCAGGCCAAGTCC
TACTCAACGACGGACAATCCTCGGCGCAGCGAGAGCGAGAAGGAGGCGGG
GGGGGAGCCTCCGGTGCCGGAAAGTCGACATTTCTTGACCTGTTGGCCGG
GCGAAAATTGGACGGCTTTTGCGCAGGCCAAGTCCTACTCAACGACGGAC
AATCCTCGGCGCAGCGAGAGCGAGAAGGAGGCGGGGGG
back to top