prot_H-paniculata_contig70935.15054.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig70935.15054.1
Unique Nameprot_H-paniculata_contig70935.15054.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
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BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A1I9LVJ8_9PHAE (50S ribosomal protein L23, chloroplastic n=8 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ8_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 6.270e-59
Identity = 90/100 (90.00%), Postives = 99/100 (99.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            MARINFSSSIDL+KYPLITSKTNLLFE+NQYTFLVDPRLNKV+IKKAIEFLFDVKIIKINSCNLPKKKRR+G+ +G++P+YKKVIVKLAKDNKIDLFSNN
Sbjct:    1 MARINFSSSIDLIKYPLITSKTNLLFEHNQYTFLVDPRLNKVNIKKAIEFLFDVKIIKINSCNLPKKKRRIGKVSGIKPQYKKVIVKLAKDNKIDLFSNN 100
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BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A0R6LUV2_UNDPI (50S ribosomal protein L23, chloroplastic n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUV2_UNDPI)

HSP 1 Score: 179 bits (455), Expect = 6.030e-57
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            MARI FSSSIDL+KYP+ T KTNLL ENNQYTFLVDP+LNKVSIKKAIEFLFDV +IK+NSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFS N
Sbjct:    1 MARIKFSSSIDLIKYPVTTIKTNLLLENNQYTFLVDPKLNKVSIKKAIEFLFDVSVIKVNSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSIN 100
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BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A8F0JZQ2_9PHAE (Ribosomal protein L23 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZQ2_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.400e-50
Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            MARI FSSSIDL+K P+IT KTNLL ENNQYTFLVDP+L KV++K+AIEFLF+V +IKINSCNLPKKKRR+G+  G RPRYKKVIVKLAKDNKIDLFS N
Sbjct:    1 MARITFSSSIDLIKCPVITIKTNLLLENNQYTFLVDPKLTKVNVKQAIEFLFNVNVIKINSCNLPKKKRRMGKSIGFRPRYKKVIVKLAKDNKIDLFSTN 100
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BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A2R4QQ38_9PHAE (50S ribosomal protein L23 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ38_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 3.730e-49
Identity = 77/100 (77.00%), Postives = 90/100 (90.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            M +I  SS IDL+KYP+ T KT LL ENNQYTFLVDP+LNK++IKKAIEFLF+VK+IK+NSCNLPKKKRRVG+F G+RPRYKKVIVKLAKD+KI+LFS N
Sbjct:    1 MVKIKLSSIIDLIKYPVTTPKTLLLLENNQYTFLVDPKLNKLNIKKAIEFLFNVKVIKVNSCNLPKKKRRVGRFIGIRPRYKKVIVKLAKDDKINLFSKN 100
[Close]
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A8F0JZN8_9PHAE (Ribosomal protein L23 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZN8_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.040e-48
Identity = 76/100 (76.00%), Postives = 90/100 (90.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            MARI FSS+IDL+KYP+ T+KT+LL ENNQYTFLVDP L K+++KKAIEFLF+VK+IK+NSCNLPKKKRRVGQF GV+PRYKKVIVKLAK+N ID  S +
Sbjct:    1 MARIKFSSTIDLIKYPISTNKTSLLLENNQYTFLVDPVLTKINVKKAIEFLFNVKVIKVNSCNLPKKKRRVGQFIGVKPRYKKVIVKLAKENTIDFSSTD 100
[Close]
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A141BSN9_9PHAE (50S ribosomal protein L23, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSN9_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 7.010e-47
Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            M +   SS IDL+KYP+ T KT LL ENNQYTF+VDP+LNK +IKK+IEFLF+VK+IK+NSCNLPKKKRRVG+FTGVRPRYKKVIVKLA ++KI+LFSN+
Sbjct:    1 MVKRKLSSLIDLIKYPVTTPKTLLLLENNQYTFMVDPKLNKFNIKKSIEFLFNVKVIKVNSCNLPKKKRRVGRFTGVRPRYKKVIVKLANNDKIELFSNS 100
[Close]
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A8F0F780_9PHAE (Ribosomal protein L23 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F780_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 7.010e-47
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFS 98
            MA+IN +SSIDL+KYP+ T KTNLL ENNQYTFLVD ++ K++IKKAIE LF+VK+IKINSCNLPKKKRRVGQ  G+RPRYKKV++KLAK+N ID FS
Sbjct:    1 MAQININSSIDLIKYPMTTDKTNLLLENNQYTFLVDRKMTKIAIKKAIELLFNVKVIKINSCNLPKKKRRVGQKVGIRPRYKKVVIKLAKENIIDFFS 98
[Close]
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A2I4Q2I3_9PHAE (50S ribosomal protein L23, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I3_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.270e-46
Identity = 74/100 (74.00%), Postives = 88/100 (88.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            MA+INFS+S+DL+K PL T KT+ LFE NQYTFLVDP+L+K +IKKAIEFLF VKIIKIN+CNLPKK RRVGQ  G+RPRYKKV+VKLAK+N ID FS++
Sbjct:    1 MAKINFSTSLDLIKQPLTTLKTSQLFEKNQYTFLVDPKLDKPTIKKAIEFLFSVKIIKINTCNLPKKTRRVGQLRGIRPRYKKVVVKLAKENTIDFFSSD 100
[Close]
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: B7T1Y2_VAULI (50S ribosomal protein L23, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Y2_VAULI)

HSP 1 Score: 130 bits (328), Expect = 1.390e-37
Identity = 57/100 (57.00%), Postives = 81/100 (81.00%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN 100
            M  +N + +IDL+KYPLIT KT  L  NNQYTF+VDP+++K  IK+ +E++F++KIIK+N+C +P+KKRRVG+F G++P YKK IVKL+K+  I+LFS N
Sbjct:    1 MTNLNIADNIDLIKYPLITDKTIQLLNNNQYTFIVDPKISKNKIKQTLEYIFNIKIIKVNTCQIPRKKRRVGRFLGIKPNYKKAIVKLSKNYTINLFSQN 100
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BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Match: A0A8E5FAP4_9PHAE (Ribosomal protein L23 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5FAP4_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.780e-37
Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 0 
Query:    1 MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEFLFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFS 98
            M ++  +SSIDL+KYPL T+K   L   NQYTFLVDPRL K++IKKAIEFLFD+KIIKINSCNLP K+RRV +  G++ RYKKVI+K+AK+ KI+  S
Sbjct:    1 MIKMELNSSIDLIKYPLNTTKAKGLISKNQYTFLVDPRLTKINIKKAIEFLFDIKIIKINSCNLPIKRRRVRKSIGIKSRYKKVIIKVAKNQKINFLS 98
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig70935.15054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVJ8_9PHAE6.270e-5990.0050S ribosomal protein L23, chloroplastic n=8 Tax=E... [more]
A0A0R6LUV2_UNDPI6.030e-5789.0050S ribosomal protein L23, chloroplastic n=25 Tax=... [more]
A0A8F0JZQ2_9PHAE4.400e-5080.00Ribosomal protein L23 n=1 Tax=Chorda asiatica TaxI... [more]
A0A2R4QQ38_9PHAE3.730e-4977.0050S ribosomal protein L23 n=3 Tax=Fucaceae TaxID=3... [more]
A0A8F0JZN8_9PHAE1.040e-4876.00Ribosomal protein L23 n=1 Tax=Desmarestia aculeata... [more]
A0A141BSN9_9PHAE7.010e-4774.0050S ribosomal protein L23, chloroplastic n=13 Tax=... [more]
A0A8F0F780_9PHAE7.010e-4774.49Ribosomal protein L23 n=1 Tax=Protohalopteris sp. ... [more]
A0A2I4Q2I3_9PHAE2.270e-4674.0050S ribosomal protein L23, chloroplastic n=1 Tax=D... [more]
B7T1Y2_VAULI1.390e-3757.0050S ribosomal protein L23, chloroplastic n=1 Tax=V... [more]
A0A8E5FAP4_9PHAE3.780e-3764.29Ribosomal protein L23 n=1 Tax=Phaeophyceae sp. Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 8..100
e-value: 1.6E-28
score: 100.9
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 12..95
e-value: 1.4E-26
score: 92.7
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_BRibosomal_L23_Bcoord: 10..99
score: 21.447
NoneNo IPR availablePANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 11..97
NoneNo IPR availablePANTHERPTHR11620:SF6250S RIBOSOMAL PROTEIN L23, CHLOROPLASTICcoord: 11..97
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 9..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig70935contigH-paniculata_contig70935:156..458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig70935.15054.1mRNA_H-paniculata_contig70935.15054.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig70935 156..684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig70935.15054.1 ID=prot_H-paniculata_contig70935.15054.1|Name=mRNA_H-paniculata_contig70935.15054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
MARINFSSSIDLVKYPLITSKTNLLFENNQYTFLVDPRLNKVSIKKAIEF
LFDVKIIKINSCNLPKKKRRVGQFTGVRPRYKKVIVKLAKDNKIDLFSNN
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
IPR012678Ribosomal_L23/L15e_core_dom_sf