prot_H-paniculata_contig7078.15040.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7078.15040.1
Unique Nameprot_H-paniculata_contig7078.15040.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length153
Homology
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.760e-18
Identity = 54/154 (35.06%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V T  QH   LTKA+ + SF  H + +MN+
Sbjct:  222 MQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.030e-18
Identity = 51/155 (32.90%), Postives = 88/155 (56.77%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNVM 152
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDN +  ++ H   ++  ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN++
Sbjct:   15 MQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNLL 169          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.250e-18
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ +  V T  QH   LTKA+ + SF  H + +MN+
Sbjct:  167 MQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNL 320          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.000e-17
Identity = 52/149 (34.90%), Postives = 85/149 (57.05%), Query Frame = 0
Query:    6 DSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            D+DYA+    R SVSG  V+ GG         ++C        ++V+LA+++ EVLFLRQ + F++P      + + EDNQ A ++     S+  ++HIDV+HH +R+ V  +++ + +V +  QH   LTKAL    FE H N +M++
Sbjct:  105 DADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECHRNYVMSM 253          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.140e-17
Identity = 53/154 (34.42%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN+
Sbjct: 1318 MQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNL 1471          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.740e-17
Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V T  QH   LTKA+ + S   H + +MN+
Sbjct:  284 MQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNL 437          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.960e-17
Identity = 52/154 (33.77%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG  +      ++C        ++VA+A+++ EVLFLRQ   F++P      + + E+NQ A ++ H   +   ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN+
Sbjct: 1277 MQVFVDADYASKATDRRSVSGGLVMCGGGCATWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFENNQGAIQIAHNPTTKSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDLVMNL 1430          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 7.920e-17
Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 0
Query:    6 DSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRCQR------RGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            D+D+A+   +R SVSG  V  GG  SV    F R Q+         ++VAL ++V E++FLRQ   F++P +    + I EDNQ A ++     S+  ++HIDV+HH +R+ VE +++ +++V +  Q    LTK+L + SFE H   +MN+
Sbjct:   78 DADFASKAANRRSVSGGIVTCGGG-SVSW--FSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDSFESHREFVMNL 226          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KQN5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.300e-16
Identity = 52/154 (33.77%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 151
            M    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ +   ++  ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN+
Sbjct:  674 MQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLYTTESEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAYNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNM 827          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.320e-16
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 0
Query:    1 MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKH 144
            M   +D+DYA+    R SV G  ++ GG         +RC        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V T  QH   LTKA+ + SF  H
Sbjct:  310 MQVFSDADYASKATDRRSVPGGLMMCGGECVTWFSRMQRCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALH 456          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G9_9PHAE2.760e-1835.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTT9_9PHAE3.030e-1832.90Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE4.250e-1835.06Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE2.000e-1734.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE2.140e-1734.42Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JEF2_9PHAE2.740e-1734.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCK7_9PHAE3.960e-1733.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KIJ7_9PHAE7.920e-1736.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQN5_9PHAE1.300e-1633.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KD11_9PHAE1.320e-1634.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7078contigH-paniculata_contig7078:9617..10075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7078.15040.1mRNA_H-paniculata_contig7078.15040.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7078 9232..10964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7078.15040.1 ID=prot_H-paniculata_contig7078.15040.1|Name=mRNA_H-paniculata_contig7078.15040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRCQRRGQQHVAL
AEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRH
IDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMN
VM*
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