mRNA_H-paniculata_contig7078.15040.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7078.15040.1
Unique NamemRNA_H-paniculata_contig7078.15040.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.260e-17
Identity = 52/161 (32.30%), Postives = 93/161 (57.76%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNVM 841
            TG+ +++    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDN +  ++ H   ++  ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN++
Sbjct:   11 TGMSMQVFV--DADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNLL 169          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.430e-17
Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 2
Query:  326 VRTKDRGLGNHLWRTG--LRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            VRT D G+    +R G    + M    D+DYA+    R SVSG  V+ GG         ++C        ++V+LA+++ EVLFLRQ + F++P      + + EDNQ A ++     S+  ++HIDV+HH +R+ V  +++ + +V +  QH   LTKAL    FE H N +M++
Sbjct:   81 VRTSDLGI---TFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECHRNYVMSM 253          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.350e-17
Identity = 55/160 (34.38%), Postives = 93/160 (58.13%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            TG+ +++    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V T  QH   LTKA+ + SF  H + +MN+
Sbjct:  218 TGMSMQVFV--DADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-16
Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            TG+ +++    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ +  V T  QH   LTKA+ + SF  H + +MN+
Sbjct:  163 TGMSMQVFV--DADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNL 320          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.620e-16
Identity = 57/164 (34.76%), Postives = 94/164 (57.32%), Query Frame = 2
Query:  365 RTGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRCQR------RGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            R G  +++    D+D+A+   +R SVSG  V  GG  SV    F R Q+         ++VAL ++V E++FLRQ   F++P +    + I EDNQ A ++     S+  ++HIDV+HH +R+ VE +++ +++V +  Q    LTK+L + SFE H   +MN+
Sbjct:   66 RYGGGIKLAGYADADFASKAANRRSVSGGIVTCGGG-SVSW--FSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDSFESHREFVMNL 226          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.360e-16
Identity = 54/160 (33.75%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            TG+ +++    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V T  QH   LTKA+ + S   H + +MN+
Sbjct:  280 TGMSMQVFV--DADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNL 437          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.740e-15
Identity = 54/160 (33.75%), Postives = 93/160 (58.13%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            TG+ +++    D+DYA+    R SVSG  V+ GG         ++C        ++VA+A+++ EVLFLRQ   F++P      + + EDNQ A ++ H   ++  ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN+
Sbjct: 1314 TGMSMQVFV--DADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNL 1471          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.660e-15
Identity = 60/176 (34.09%), Postives = 95/176 (53.98%), Query Frame = 2
Query:  326 VRTKDRGLGNHLWRTG--LRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            VRT D G+    +R G    + M    D+DYA+    R SVSG  V+ GG         ++C        ++V+LA+++ EVLFLRQ   F++P      + + EDNQ A ++     S+  ++HIDV+HH +R+ V  +++ + +V +  QH   LTKAL    FE H N +M++
Sbjct:  265 VRTSDLGI---TFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.350e-15
Identity = 51/156 (32.69%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  380 VRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            V  +   D+D+A+    R SVSG  V  GG         ++C        ++VAL ++V E+LFLRQ   F++P +    + + EDNQ A ++     S+  ++HIDV+HH +R+ VE +++ +++V +  Q    LTK+L + +FE H + +MN+
Sbjct:   55 VDAVGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 210          
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.980e-15
Identity = 53/160 (33.12%), Postives = 93/160 (58.13%), Query Frame = 2
Query:  368 TGLRVRMLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRC---QRRGQQHVALAEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRHIDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMNV 838
            TG+ +++    D+DYA+    R SVSG  V+ GG  +      ++C        ++VA+A+++ EVLFLRQ   F++P      + + E+NQ A ++ H   +   ++HIDV+HH +R+ VE +++ + +V +  QH   LTKA+ + SF  H + +MN+
Sbjct: 1273 TGMGMQVFV--DADYASKATDRRSVSGGLVMCGGGCATWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFENNQGAIQIAHNPTTKSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDLVMNL 1430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7078.15040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTT9_9PHAE4.260e-1732.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE4.430e-1734.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE8.350e-1734.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE1.020e-1634.38Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIJ7_9PHAE1.620e-1634.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE8.360e-1633.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHY5_9PHAE1.740e-1533.75Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JLN0_9PHAE2.660e-1534.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUW6_9PHAE3.350e-1532.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK7_9PHAE3.980e-1533.13Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7078contigH-paniculata_contig7078:9232..10964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score70.5
Seed ortholog evalue7.8e-10
Seed eggNOG ortholog4081.Solyc03g062850.1.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGs37SNQ@33090,3GHRQ@35493,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size1733
Cds size459
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7078.15040.1prot_H-paniculata_contig7078.15040.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7078 9617..10075 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930855.0708601-UTR-H-paniculata_contig7078:9231..96161622930855.0708601-UTR-H-paniculata_contig7078:9231..9616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7078 9232..9616 +
1691481482.7978792-UTR-H-paniculata_contig7078:9231..96161691481482.7978792-UTR-H-paniculata_contig7078:9231..9616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7078 9232..9616 +
1622930855.110891-UTR-H-paniculata_contig7078:10075..109641622930855.110891-UTR-H-paniculata_contig7078:10075..10964Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7078 10076..10964 +
1691481482.818623-UTR-H-paniculata_contig7078:10075..109641691481482.818623-UTR-H-paniculata_contig7078:10075..10964Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7078 10076..10964 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930855.0874214-CDS-H-paniculata_contig7078:9616..100751622930855.0874214-CDS-H-paniculata_contig7078:9616..10075Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7078 9617..10075 +
1691481482.8108425-CDS-H-paniculata_contig7078:9616..100751691481482.8108425-CDS-H-paniculata_contig7078:9616..10075Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7078 9617..10075 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7078.15040.1

>prot_H-paniculata_contig7078.15040.1 ID=prot_H-paniculata_contig7078.15040.1|Name=mRNA_H-paniculata_contig7078.15040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MLACTDSDYATCQDSRCSVSGRAVLLGGARSVGTRGFRRCQRRGQQHVAL
AEMVNEVLFLRQEQAFIMPTLEDYPVIIKEDNQRAEKMGHTKHSSRRTRH
IDVKHHIVRDAVEAEKVDLVYVGTGEQHTGVLTKALERSSFEKHVNGLMN
VM*
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mRNA from alignment at H-paniculata_contig7078:9232..10964+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7078.15040.1 ID=mRNA_H-paniculata_contig7078.15040.1|Name=mRNA_H-paniculata_contig7078.15040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1733bp|location=Sequence derived from alignment at H-paniculata_contig7078:9232..10964+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCACATGACCCACGATGGGAAAAAGAGGAAAATCAAGATATTGACCAGCA CATCTACGCGAGGTCCATGGCCGAGCGTTTTGGGATAACCAAGACCAGCA CTCTCCCGGCCACGGCGGGAAACAACACCATGATCGAAAACGACGGGCCG AAGACCTCAGAGGAAGCCGAGGAATGAAAGCGTTACCATACAGGGAGGCA GTGAGGGCGCTCATGTGGGCGGCAACAATGACGCGACCCGACATCGCACA AGCCATGCGCACTATGGTAAAGTTCTGTGAGAACCCAGGGGTGGAGCACA AGAGAGCTGTGGTGAAGATTCTGCAGTACGTACTAAGGACCGTGGCCTTG GGAATCATCTATGGCGGACAGGACTGCGGGTTCGAATGTTGGCTTGCACT GATTCGGACTACGCAACGTGCCAGGACAGCCGATGCTCGGTATCCGGCCG AGCGGTACTGCTGGGAGGAGCGCGATCAGTTGGCACTCGAGGATTCAGGA GGTGTCAGCGGCGGGGACAACAACACGTCGCGTTGGCGGAGATGGTGAAC GAAGTACTGTTTCTGCGTCAAGAACAAGCGTTCATAATGCCGACGCTGGA AGATTACCCCGTAATAATTAAGGAAGACAATCAAAGGGCCGAAAAGATGG GTCACACCAAGCACAGCAGTCGGAGGACGCGTCACATCGACGTGAAGCAC CACATTGTTCGCGATGCGGTTGAGGCTGAGAAGGTTGACCTAGTGTATGT GGGGACGGGAGAGCAGCACACGGGCGTACTCACGAAGGCGTTGGAGAGAA GTTCTTTTGAGAAGCACGTAAACGGGTTGATGAATGTTATGTAATTGCGC GAATAACGCGAATAAGAAGAGAAGGAATTTATTCTTCAACGTTGCAGTTA CATGGAATAATAACTTTTGTCAAATGAAGTCAGATGCCGTATGAAGTAGA AACGTACGCTAGCGAACTATTACCCTAGAGCAAATGGAGGTATTAAAGTC GTATGCTCTACTGAATACTGTAGTTGGTATTGGTAACAGCAGTAATGCTG TATCATGCTTTGATGAATATGTGTAGCACAATATACGATGTGGAGAAATA CAATAGGAACTTGGCCGCATGCCGTTACATTTCCAGAATTATGGGTAGTC CTCACAATAACAATCAAGGAATGGTCGAGACGTCCGAGTCTTTCCATGTT TGGGAGATGTTGTTCCATAGGTTTATAGATCGATGAAGGAGAGTCCCACC TAGCCCACTTCCATTTCCAACGGGTCAAGCCAAGGTTTCTAGTCTGAAAG TTCAGTAGACGGATCACAGCAGTAGAGGTTATTACCAGAGAGGGCAAGAG GGGATCAATAAAAAAAGGAAAGAAAAGAATATGTTGTTTCCAGCGCACGC CTAGACTCTGCGAAGGAGAGTCTAAGCGGGAAGCCGTGCCAGCTTTCAAC AGCAAATAACATCGAACATAGTATTCGAAGACAACAAGGGGGGAAAGGCG AAATCCCTTGAACTCATCGAATAGTAAGCATATCGACGAAAGGCATAATT TTCTGAGTGAGTTGGTGGACAAGATTGAGACGGGGAGTAGAACAATGGGC GGAAATTTTGACAAAAGCGTTTGACAAGCCGACTTTTCAAAAGCACCGTG ATTTTCTTCTTGGCATTGGCAAGTAAAGTAAAGAGTACTTGTAGCCGAAT TGTAGGCTCACCGATGTAAATGAGTCAGGGAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig7078:9232..10964+

>mRNA_H-paniculata_contig7078.15040.1 ID=mRNA_H-paniculata_contig7078.15040.1|Name=mRNA_H-paniculata_contig7078.15040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig7078:9232..10964+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGGCTTGCACTGATTCGGACTACGCAACGTGCCAGGACAGCCGATG
CTCGGTATCCGGCCGAGCGGTACTGCTGGGAGGAGCGCGATCAGTTGGCA
CTCGAGGATTCAGGAGGTGTCAGCGGCGGGGACAACAACACGTCGCGTTG
GCGGAGATGGTGAACGAAGTACTGTTTCTGCGTCAAGAACAAGCGTTCAT
AATGCCGACGCTGGAAGATTACCCCGTAATAATTAAGGAAGACAATCAAA
GGGCCGAAAAGATGGGTCACACCAAGCACAGCAGTCGGAGGACGCGTCAC
ATCGACGTGAAGCACCACATTGTTCGCGATGCGGTTGAGGCTGAGAAGGT
TGACCTAGTGTATGTGGGGACGGGAGAGCAGCACACGGGCGTACTCACGA
AGGCGTTGGAGAGAAGTTCTTTTGAGAAGCACGTAAACGGGTTGATGAAT
GTTATGTAAATGTTGGCTTGCACTGATTCGGACTACGCAACGTGCCAGGA
CAGCCGATGCTCGGTATCCGGCCGAGCGGTACTGCTGGGAGGAGCGCGAT
CAGTTGGCACTCGAGGATTCAGGAGGTGTCAGCGGCGGGGACAACAACAC
GTCGCGTTGGCGGAGATGGTGAACGAAGTACTGTTTCTGCGTCAAGAACA
AGCGTTCATAATGCCGACGCTGGAAGATTACCCCGTAATAATTAAGGAAG
ACAATCAAAGGGCCGAAAAGATGGGTCACACCAAGCACAGCAGTCGGAGG
ACGCGTCACATCGACGTGAAGCACCACATTGTTCGCGATGCGGTTGAGGC
TGAGAAGGTTGACCTAGTGTATGTGGGGACGGGAGAGCAGCACACGGGCG
TACTCACGAAGGCGTTGGAGAGAAGTTCTTTTGAGAAGCACGTAAACGGG
TTGATGAATGTTATGTAA
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