prot_H-paniculata_contig7078.15038.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7078.15038.1
Unique Nameprot_H-paniculata_contig7078.15038.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.660e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDAD 291          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.690e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:  399 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDAD 465          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.710e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:  920 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDAD 986          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.740e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:   41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADAD 107          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.810e-9
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRP+IANAARAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:   80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADAD 146          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KSZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ9_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.820e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:   83 MWLATQTRPDIANAVRAVARYCAPPKEIHWRAGPGILGYVVMTSDLGITFRRVSVAGLSMEVFADAD 149          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KNR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNR0_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.940e-9
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQ--DSLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P  VRWKA   IL Y+   + +G+T+ R     ++++V  D D
Sbjct:  117 MWLATQTRPDIANALRAVARYCASPKMVRWKAALGILGYVRRTSWMGITFERGVLTGMSMKVFVDAD 183          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KKG5_9PHAE (Integrase catalytic domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 5.980e-9
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+T+ R     L++EV  D D
Sbjct:  950 MWLATQTRPDIANAVRAVERYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVARLSMEVFADAD 1016          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5KY90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY90_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.110e-9
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL Y+   + LG+++ R     L++EV  D D
Sbjct:  538 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGISFRRGSVAGLSMEVFADAD 604          
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.110e-8
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTYSRQD--SLNVEVVFDLD 65
            MW+A QTRPDIANA RAV  +   P E+ W+A   IL  +   + LG+T+ R+    L++EV  D D
Sbjct:  684 MWLATQTRPDIANAVRAVARYYASPKEIHWRAGLGILGCVVRTSDLGITFRRRSVAGLSIEVFADAD 750          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7078.15038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE1.660e-946.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE1.690e-946.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE1.710e-946.27Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5JTK6_9PHAE1.740e-946.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD60_9PHAE1.810e-946.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ9_9PHAE4.820e-946.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNR0_9PHAE4.940e-944.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKG5_9PHAE5.980e-946.27Integrase catalytic domain-containing protein n=6 ... [more]
A0A6H5KY90_9PHAE8.110e-944.78Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L0C9_9PHAE1.110e-844.78Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7078contigH-paniculata_contig7078:4665..4862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7078.15038.1mRNA_H-paniculata_contig7078.15038.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7078 3299..4862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7078.15038.1 ID=prot_H-paniculata_contig7078.15038.1|Name=mRNA_H-paniculata_contig7078.15038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MWIAGQTRPDIANAARAVVTFSHDPNEVRWKATCKILEYMDAMTHLGLTY
SRQDSLNVEVVFDLDA
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