prot_H-paniculata_contig7067.15027.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7067.15027.1
Unique Nameprot_H-paniculata_contig7067.15027.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length359
Homology
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BLAST of mRNA_H-paniculata_contig7067.15027.1 vs. uniprot
Match: A0A6H5JFF7_9PHAE (DUF4209 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 6.780e-13
Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:  106 RISPSTNVVNVFSLPQIGCLAGLCRSSSNIARGLAARIIELEREMTSGTARSGQRRAYAATLMVAPTLLCFLAQTV 181
            RISP TNV+    LPQ   +A LC++ +  A GL  RI ELE  ++SG+ARSGQRRAYA TL VAPT+L FLA TV
Sbjct:  868 RISPPTNVITCAPLPQRQMMATLCKACAESALGLRERIAELEALLSSGSARSGQRRAYATTLQVAPTILRFLASTV 943
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7067.15027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFF7_9PHAE6.780e-1359.21DUF4209 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7067contigH-paniculata_contig7067:9906..10982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7067.15027.1mRNA_H-paniculata_contig7067.15027.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7067 9799..11155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7067.15027.1 ID=prot_H-paniculata_contig7067.15027.1|Name=mRNA_H-paniculata_contig7067.15027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=359bp
MSNMEGGITSDEERRSESEARSLSVTDELVFRAKPREGLLHGNGTNISFH
DGAAGNDTGVSARGDDDGGQRFPSQRISSGKNLPVKGKSTVRTGIWLKEQ
VRTPRRISPSTNVVNVFSLPQIGCLAGLCRSSSNIARGLAARIIELEREM
TSGTARSGQRRAYAATLMVAPTLLCFLAQTVVTVEAFVLEWDTRNSVTAA
SGISGHAPTVDNDQDRETIGHRGSTVSCPRASKRKEKRDESIGERRSGGE
VRSIHEELKKPGGASSSVVADQLSFLRRLTAVIGALGLCVSVIDADSSGQ
CSDGNVVKKEEEDTSSSNVSTPVIERTGRKGYVQALTELAVFLETKIANR
GFSGRGSV*
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