prot_H-paniculata_contig706.15023.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig706.15023.1
Unique Nameprot_H-paniculata_contig706.15023.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
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BLAST of mRNA_H-paniculata_contig706.15023.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.790e-19
Identity = 76/207 (36.71%), Postives = 92/207 (44.44%), Query Frame = 0 
Query:    2 DPEALEAALFLPVKRWGNARDPFYASGTSESTKEPEHAFAHRRCATDIPSPSLSTLPTTPFTGNIADISISQHRSADRIFNGDEKTTNAAHEETEETVCSRSGRARDNSDGSNIVLHLWIGVGGSAEAVTFAVERLAVGTAQEQGLSPVWAVLDCAGSANASPMFGTVDLKRQVKLLPGQCKVIQHLVPAFAGLEWSWKHAPLIVNT 208
            DPE LEAA+ LP++RWG    P Y    S    E      H R    I S S  T  TT      A  +          FN   +T +                       S ++L++  G  G+  AVTF V+              V A LDC GS NASPM G++ L R+V LLPGQ KVIQHLVP      WSWKHAPL V+T
Sbjct:  976 DPELLEAAVALPIQRWGYP-SPGYPDLASPPPVE------HSRALATIASGSNKTGATTTAEMETATTASVTGHEITATFNNASRTDDXXXXXXXXXXXXXXXXXXXXXK-SGLLLYVRPGPKGAENAVTFLVQS-------PIHFFSVRARLDCTGSVNASPMPGSIGLSREVTLLPGQSKVIQHLVPTDPRTPWSWKHAPLTVDT 1167
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig706.15023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3H8_ECTSI1.790e-1936.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig706contigH-paniculata_contig706:180..1368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig706.15023.1mRNA_H-paniculata_contig706.15023.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig706 175..1446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig706.15023.1 ID=prot_H-paniculata_contig706.15023.1|Name=mRNA_H-paniculata_contig706.15023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MDPEALEAALFLPVKRWGNARDPFYASGTSESTKEPEHAFAHRRCATDIP
SPSLSTLPTTPFTGNIADISISQHRSADRIFNGDEKTTNAAHEETEETVC
SRSGRARDNSDGSNIVLHLWIGVGGSAEAVTFAVERLAVGTAQEQGLSPV
WAVLDCAGSANASPMFGTVDLKRQVKLLPGQCKVIQHLVPAFAGLEWSWK
HAPLIVNTFELSKPDVV*
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