prot_H-paniculata_contig7052.15014.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7052.15014.1
Unique Nameprot_H-paniculata_contig7052.15014.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.950e-16
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 KQAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQDTQEESGSSSVAGRSVGVAGSLAVDNATGLKIDD 72
            KQAVGRV+RLGQTR V VTKLVLKDS+ETR LALQ++Q T E S S++V   S G+AG++A DNA  LKID+
Sbjct: 1240 KQAVGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQAT-EGSASAAVGAGSNGIAGNIARDNAKNLKIDE 1310          
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 6.220e-13
Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 KQAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQDTQEESGSSSVA------GRSVGVAGSLAVDNATGLKIDD 72
            KQA+GRV+RLGQTR V VTKLVLKDS+ETR LALQ++Q T+   GS+S A        S GVAG++A DNA  LKI +
Sbjct: 1204 KQAIGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATE---GSASAAVGAPSSSSSDGVAGNIARDNAKDLKIGE 1278          
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Match: D7G0T7_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T7_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 6.820e-11
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    1 KQAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQDTQEESGSSSVAGRSVGVAGSLAVDNATGLKIDD 72
            KQA+GRVHRLGQTR V VTKLVL DS+ETR LA+++ Q     S  SS+     G AGSLA ++A  LK+ +
Sbjct:  145 KQAIGRVHRLGQTRPVTVTKLVLADSVETRILAMRKMQARGGGSAGSSLFNAQGGPAGSLAREDARHLKVGE 216          
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.010e-6
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 QAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQDTQEESGSSSVAGRSVGVAGSLAVDNATGLKIDD 72
            QA+GRVHRLGQTRAV V KL ++ S+E+R +A+Q  +  +   GS     R    AGS++ D A  L+I D
Sbjct: 1446 QAIGRVHRLGQTRAVHVVKLYMEASVESRIIAMQTAKSDRAAQGSDE--DRPATAAGSISKDGAKELRIKD 1514          
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Match: A0A7S2L1M0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L1M0_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 4.730e-5
Identity = 32/88 (36.36%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    2 QAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQ-----DTQEESGSSSVAGRSVGVAGSLAVDNATGLKIDDVRCGHFRLIVQR 84
            QAVGRVHR+GQTR V++ +LV+KDS+E R     +R+     D +  + S+  A  ++ + GS+A ++   +K +++ C +F L+  R
Sbjct:   18 QAVGRVHRIGQTRQVQIVRLVMKDSIEERMEIFLKRKYGDISDDKSPNDSNQTAA-TMAIVGSIAHES---VKSENLDCEYFDLLFGR 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7052.15014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KW09_9PHAE8.950e-1666.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S9_ECTSI6.220e-1360.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0T7_ECTSI6.820e-1155.56Helicase C-terminal domain-containing protein n=1 ... [more]
A0A835YWG4_9STRA2.010e-646.48SNF2 family N-terminal domain-containing protein n... [more]
A0A7S2L1M0_9STRA4.730e-536.36Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..54
e-value: 5.2E-10
score: 40.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7052contigH-paniculata_contig7052:7478..11368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7052.15014.1mRNA_H-paniculata_contig7052.15014.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7052 7317..11368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7052.15014.1 ID=prot_H-paniculata_contig7052.15014.1|Name=mRNA_H-paniculata_contig7052.15014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
KQAVGRVHRLGQTRAVKVTKLVLKDSLETRALALQRRQDTQEESGSSSVA
GRSVGVAGSLAVDNATGLKIDDVRCGHFRLIVQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase