prot_H-paniculata_contig7043.15003.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7043.15003.1
Unique Nameprot_H-paniculata_contig7043.15003.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 3.970e-55
Identity = 111/181 (61.33%), Postives = 131/181 (72.38%), Query Frame = 0
Query:   38 VKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEGAPA--QGSRNKKRAKIGSKLATGKDPFTFGELNFSGKKAQEAKDAAAKAK 216
            ++LLKDAGV SYE RVVS LV+RMRRYT E+L DARDYADHAGR D+ M DVRLAVRKKQD+L++GPP+R+D IR AD+VNRIPLP IPD FGVRLPP QYQ TLPNLQW+   EP    ++    +D E AP+   G+RNKK AK    L T K P T  E     K+ +EA  A A+AK
Sbjct:    1 MQLLKDAGVTSYEPRVVSHLVDRMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAEPPVHDEAGEMDVDPEQAPSPLSGNRNKK-AKTTPGLET-KKPLTLKEK----KEQEEANRAKAEAK 175          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A151Z337_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z337_9MYCE)

HSP 1 Score: 98.6 bits (244), Expect = 6.850e-21
Identity = 60/141 (42.55%), Postives = 95/141 (67.38%), Query Frame = 0
Query:   29 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEG 168
            LDE RD + I  +L   GV+SY+ RVV+QL+E M +Y  +IL D++ YA+H+G+ ++ + DVRL+++ + +  TS PP R+ ++ +A++ N+IPLP IP+ FGV LPP +Y  T PN Q  V ++PL  P   + P  ++G
Sbjct:   59 LDEPRDARIIKSILNTMGVQSYDPRVVNQLLEFMTKYVFDILQDSQVYAEHSGKTEMDVSDVRLSIQSRVNH-TSTPPPREMVVGIAEEQNKIPLPAIPNKFGVFLPPDEYCITNPNYQI-VPNKPLVQPNQPLPPNTMKG 197          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4QEA6_CAVFA (Transcription initiation factor TFIID subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEA6_CAVFA)

HSP 1 Score: 97.8 bits (242), Expect = 1.030e-20
Identity = 59/159 (37.11%), Postives = 97/159 (61.01%), Query Frame = 0
Query:   23 DKAKAALDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEGAPAQGSRNKKRA 180
            D ++  LDE RD + I  +LK  GV+ ++ RVV+QL+E M +Y  E+L D+  Y++HA + DI + D+RL+++ + +   + PP R+ L+ +++++N++PLPPIP+ FG+ LPP +Y    PN Q D      P  Q    P  +    ++G  NKK A
Sbjct:  129 DLSQTNLDEPRDARVIKNILKTMGVQQHDSRVVNQLMEFMYKYVYEVLQDSMVYSEHANKQDIDISDIRLSIQSRVNFSFTQPPPRELLLSISEELNKVPLPPIPNKFGILLPPDEYCLNYPNYQVD------PPKQVKEPPQPLVANTSKGHYNKKIA 281          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: UPI000644E8C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8C7)

HSP 1 Score: 98.6 bits (244), Expect = 1.120e-20
Identity = 54/121 (44.63%), Postives = 83/121 (68.60%), Query Frame = 0
Query:   29 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWD 148
            LDE RD + I  +LK  GV+S++ RVV+QL+E M +Y  E+L D+  Y++H+GR +I + D+RL+++ + +   + PP R+ L+ ++++ NRIPLPPIP  FGV LPP +Y    PN Q D
Sbjct:  168 LDEPRDSRVIKNILKTMGVQSHDPRVVNQLLEFMFKYVYEVLQDSIAYSEHSGRSEIDISDIRLSIQSRVNFSFTQPPPRELLLSISEEKNRIPLPPIPQKFGVLLPPDEYCLNYPNYQVD 288          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4P4F0_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4F0_BATDJ)

HSP 1 Score: 93.2 bits (230), Expect = 1.130e-20
Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 0
Query:   32 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 146
            RD K I  +L+ A V  YE R++ QL+E   RY  ++L D++ +ADHAG  D+ +DD+RLA+  +     +GPP+R+ ++ LA+  N IPLP IP+ FG+RLPP +   T  N Q
Sbjct:    2 RDAKLISLILQAAEVDDYEPRIIPQLLEFAHRYVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 116          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: Q55A39_DICDI (Transcription initiation factor TFIID subunit n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55A39_DICDI)

HSP 1 Score: 99.4 bits (246), Expect = 2.420e-20
Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 0
Query:   29 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 146
            LDE RD + I  +LK  G++++E RVV+QL+E M +Y  E+L DA  Y +H+G+ DI + DVRL+++ + +   S PP R+ L+ +A++ N+ PLPPIP+ +GV LPP +Y  T PN Q
Sbjct:  210 LDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQ 328          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: E3JXG9_PUCGT (Uncharacterized protein n=7 Tax=Puccinia TaxID=5296 RepID=E3JXG9_PUCGT)

HSP 1 Score: 94.4 bits (233), Expect = 4.780e-20
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 0
Query:   32 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIA----MDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPT 156
            RD + I  LL   GV+S  + VV  L+E   RYT +IL DA  YA+HAGR   A    ++DVRLAV+ K +   SGP +++ L+ LAD++NR  LPPIP+ +G+RLPP + + T PN  +D+  +P PT
Sbjct:   32 RDARIIALLLASMGVQSASEGVVRVLMEFAHRYTVDILSDALVYAEHAGRAHAAHGPDVEDVRLAVQAKVEHSMSGPMSKEFLLNLADNLNRTALPPIPERYGIRLPPEKDRLTAPN--FDIAPKPPPT 158          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A1V9ZX43_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX43_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.470e-20
Identity = 58/152 (38.16%), Postives = 93/152 (61.18%), Query Frame = 0
Query:    1 MSSSTGPKRVGMSDASS----KRTAEDKAKAALDERDEKSIVK-LLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQW 147
            MS S   KR  M+  SS    + T E+     + E ++ +++K +L+  GV  YE RV+SQL+E + RYTT +L DA++Y+ +A + ++  DD+RLA   +     S  P R+ ++ LA+  N IPLPPIP+ +GVRLP P+YQ +  ++ +
Sbjct:    1 MSDSKEGKRRKMNAVSSSAIEEETTEEPTSKEVHEPEDVAVIKNILESMGVVKYEPRVISQLLEFVHRYTTNVLVDAQEYSHYASKPEMDQDDIRLAAMSRLHHTYSQMPPRELMMELAEKRNAIPLPPIPNEYGVRLPSPEYQISTDHIPY 152          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 93.6 bits (231), Expect = 6.610e-20
Identity = 48/115 (41.74%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   32 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 146
            RD K I  +L+   V+  +Q+V+ QL+E   RYTT++  DA  Y++HAGR D+ +DDVRLA++ + +   + PP ++ L+ LA++ NR+PLP IP+ +G+RLP  ++  T  N Q
Sbjct:    8 RDAKVISLILQSLAVEDADQKVIHQLLEFAHRYTTDVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQ 122          
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4R509_MELLP (Transcription initiation factor TFIID subunit 9 n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R509_MELLP)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-19
Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 0
Query:   32 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIA----MDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNL 145
            RD + I  LL   GV+S  + VV  L+E   RYT +IL DA  YADHAGR   A    ++DVRLAV+ K +   SGP +++ L+ LAD +NR  LPPIP+ +G+RLPP + + T PN 
Sbjct:   26 RDARIIAILLASMGVQSASEGVVRVLMEFAHRYTVDILSDAMVYADHAGRAHAAHGPDVEDVRLAVQAKVEHSMSGPMSKEFLLNLADTLNRTSLPPIPERYGIRLPPEKDRLTAPNF 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI3.970e-5561.33Transcription initiation factor TFIID subunit n=2 ... [more]
A0A151Z337_9MYCE6.850e-2142.55Transcription initiation factor TFIID subunit n=1 ... [more]
F4QEA6_CAVFA1.030e-2037.11Transcription initiation factor TFIID subunit n=1 ... [more]
UPI000644E8C71.120e-2044.63hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4P4F0_BATDJ1.130e-2043.48Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
Q55A39_DICDI2.420e-2045.38Transcription initiation factor TFIID subunit n=1 ... [more]
E3JXG9_PUCGT4.780e-2045.74Uncharacterized protein n=7 Tax=Puccinia TaxID=529... [more]
A0A1V9ZX43_9STRA6.470e-2038.16Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A197JZG0_9FUNG6.610e-2041.74TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
F4R509_MELLP1.150e-1947.46Transcription initiation factor TFIID subunit 9 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 32..145
e-value: 6.5E-32
score: 110.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 32..98
e-value: 2.0E-20
score: 74.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 32..94
NoneNo IPR availablePANTHERPTHR12595:SF6TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 31..196
NoneNo IPR availablePANTHERPTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDcoord: 31..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7043contigH-paniculata_contig7043:3027..8530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7043.15003.1mRNA_H-paniculata_contig7043.15003.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7043 2744..10465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7043.15003.1 ID=prot_H-paniculata_contig7043.15003.1|Name=mRNA_H-paniculata_contig7043.15003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MSSSTGPKRVGMSDASSKRTAEDKAKAALDERDEKSIVKLLKDAGVKSYE
QRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSL
TSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVE
DEPLPTPQSDVEPMDVEGAPAQGSRNKKRAKIGSKLATGKDPFTFGELNF
SGKKAQEAKDAAAKAKKRQKGNRSPVPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003162TFIID-31
IPR009072Histone-fold