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Homology
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.490e-49 Identity = 111/181 (61.33%), Postives = 131/181 (72.38%), Query Frame = 2
Query: 395 VKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEGAPA--QGSRNKKRAKIGSKLATGKDPFTFGELNFSGKKAQEAKDAAAKAK 931
++LLKDAGV SYE RVVS LV+RMRRYT E+L DARDYADHAGR D+ M DVRLAVRKKQD+L++GPP+R+D IR AD+VNRIPLP IPD FGVRLPP QYQ TLPNLQW+ EP ++ +D E AP+ G+RNKK AK L T K P T E K+ +EA A A+AK
Sbjct: 1 MQLLKDAGVTSYEPRVVSHLVDRMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAEPPVHDEAGEMDVDPEQAPSPLSGNRNKK-AKTTPGLET-KKPLTLKEK----KEQEEANRAKAEAK 175
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4P4F0_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4F0_BATDJ) HSP 1 Score: 93.2 bits (230), Expect = 9.780e-19 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 2
Query: 377 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 721
RD K I +L+ A V YE R++ QL+E RY ++L D++ +ADHAG D+ +DD+RLA+ + +GPP+R+ ++ LA+ N IPLP IP+ FG+RLPP + T N Q
Sbjct: 2 RDAKLISLILQAAEVDDYEPRIIPQLLEFAHRYVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 116
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A151Z337_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z337_9MYCE) HSP 1 Score: 98.6 bits (244), Expect = 1.280e-18 Identity = 60/141 (42.55%), Postives = 95/141 (67.38%), Query Frame = 2
Query: 368 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEG 787
LDE RD + I +L GV+SY+ RVV+QL+E M +Y +IL D++ YA+H+G+ ++ + DVRL+++ + + TS PP R+ ++ +A++ N+IPLP IP+ FGV LPP +Y T PN Q V ++PL P + P ++G
Sbjct: 59 LDEPRDARIIKSILNTMGVQSYDPRVVNQLLEFMTKYVFDILQDSQVYAEHSGKTEMDVSDVRLSIQSRVNH-TSTPPPREMVVGIAEEQNKIPLPAIPNKFGVFLPPDEYCITNPNYQI-VPNKPLVQPNQPLPPNTMKG 197
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4QEA6_CAVFA (Transcription initiation factor TFIID subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEA6_CAVFA) HSP 1 Score: 97.8 bits (242), Expect = 1.760e-18 Identity = 59/159 (37.11%), Postives = 97/159 (61.01%), Query Frame = 2
Query: 350 DKAKAALDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPTPQSDVEPMDVEGAPAQGSRNKKRA 823
D ++ LDE RD + I +LK GV+ ++ RVV+QL+E M +Y E+L D+ Y++HA + DI + D+RL+++ + + + PP R+ L+ +++++N++PLPPIP+ FG+ LPP +Y PN Q D P Q P + ++G NKK A
Sbjct: 129 DLSQTNLDEPRDARVIKNILKTMGVQQHDSRVVNQLMEFMYKYVYEVLQDSMVYSEHANKQDIDISDIRLSIQSRVNFSFTQPPPRELLLSISEELNKVPLPPIPNKFGILLPPDEYCLNYPNYQVD------PPKQVKEPPQPLVANTSKGHYNKKIA 281
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: UPI000644E8C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8C7) HSP 1 Score: 98.6 bits (244), Expect = 2.260e-18 Identity = 54/121 (44.63%), Postives = 83/121 (68.60%), Query Frame = 2
Query: 368 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWD 727
LDE RD + I +LK GV+S++ RVV+QL+E M +Y E+L D+ Y++H+GR +I + D+RL+++ + + + PP R+ L+ ++++ NRIPLPPIP FGV LPP +Y PN Q D
Sbjct: 168 LDEPRDSRVIKNILKTMGVQSHDPRVVNQLLEFMFKYVYEVLQDSIAYSEHSGRSEIDISDIRLSIQSRVNFSFTQPPPRELLLSISEEKNRIPLPPIPQKFGVLLPPDEYCLNYPNYQVD 288
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A1V9ZX43_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX43_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.620e-18 Identity = 58/152 (38.16%), Postives = 93/152 (61.18%), Query Frame = 2
Query: 284 MSSSTGPKRVGMSDASS----KRTAEDKAKAALDERDEKSIVK-LLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQW 724
MS S KR M+ SS + T E+ + E ++ +++K +L+ GV YE RV+SQL+E + RYTT +L DA++Y+ +A + ++ DD+RLA + S P R+ ++ LA+ N IPLPPIP+ +GVRLP P+YQ + ++ +
Sbjct: 1 MSDSKEGKRRKMNAVSSSAIEEETTEEPTSKEVHEPEDVAVIKNILESMGVVKYEPRVISQLLEFVHRYTTNVLVDAQEYSHYASKPEMDQDDIRLAAMSRLHHTYSQMPPRELMMELAEKRNAIPLPPIPNEYGVRLPSPEYQISTDHIPY 152
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: E3JXG9_PUCGT (Uncharacterized protein n=7 Tax=Puccinia TaxID=5296 RepID=E3JXG9_PUCGT) HSP 1 Score: 94.4 bits (233), Expect = 5.320e-18 Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 2
Query: 377 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIA----MDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVEDEPLPT 751
RD + I LL GV+S + VV L+E RYT +IL DA YA+HAGR A ++DVRLAV+ K + SGP +++ L+ LAD++NR LPPIP+ +G+RLPP + + T PN +D+ +P PT
Sbjct: 32 RDARIIALLLASMGVQSASEGVVRVLMEFAHRYTVDILSDALVYAEHAGRAHAAHGPDVEDVRLAVQAKVEHSMSGPMSKEFLLNLADNLNRTALPPIPERYGIRLPPEKDRLTAPN--FDIAPKPPPT 158
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG) HSP 1 Score: 93.6 bits (231), Expect = 6.740e-18 Identity = 48/115 (41.74%), Postives = 77/115 (66.96%), Query Frame = 2
Query: 377 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 721
RD K I +L+ V+ +Q+V+ QL+E RYTT++ DA Y++HAGR D+ +DDVRLA++ + + + PP ++ L+ LA++ NR+PLP IP+ +G+RLP ++ T N Q
Sbjct: 8 RDAKVISLILQSLAVEDADQKVIHQLLEFAHRYTTDVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQ 122
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: Q55A39_DICDI (Transcription initiation factor TFIID subunit n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55A39_DICDI) HSP 1 Score: 99.4 bits (246), Expect = 1.060e-17 Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 2
Query: 368 LDE-RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQ 721
LDE RD + I +LK G++++E RVV+QL+E M +Y E+L DA Y +H+G+ DI + DVRL+++ + + S PP R+ L+ +A++ N+ PLPPIP+ +GV LPP +Y T PN Q
Sbjct: 210 LDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQ 328
BLAST of mRNA_H-paniculata_contig7043.15003.1 vs. uniprot
Match: F4R509_MELLP (Transcription initiation factor TFIID subunit 9 n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R509_MELLP) HSP 1 Score: 93.2 bits (230), Expect = 1.160e-17 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 2
Query: 377 RDEKSIVKLLKDAGVKSYEQRVVSQLVERMRRYTTEILCDARDYADHAGRVDIA----MDDVRLAVRKKQDSLTSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNL 718
RD + I LL GV+S + VV L+E RYT +IL DA YADHAGR A ++DVRLAV+ K + SGP +++ L+ LAD +NR LPPIP+ +G+RLPP + + T PN
Sbjct: 26 RDARIIAILLASMGVQSASEGVVRVLMEFAHRYTVDILSDAMVYADHAGRAHAAHGPDVEDVRLAVQAKVEHSMSGPMSKEFLLNLADTLNRTSLPPIPERYGIRLPPEKDRLTAPNF 143
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 192.6 |
| Seed ortholog evalue | 2e-46 |
| Seed eggNOG ortholog | 2880.D8LAZ7 |
| Preferred name | TAF9 |
| KEGG ko | ko:K02868,ko:K03133,ko:K05030,ko:K14535 |
| KEGG TC | 1.A.13.1 |
| KEGG Pathway | ko03010,ko03022,ko04924,ko04972,ko05168,map03010,map03022,map04924,map04972,map05168 |
| KEGG Module | M00177 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000123,GO:0000124,GO:0000228,GO:0000428,GO:0000785,GO:0000790,GO:0000988,GO:0000990,GO:0000991,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016569,GO:0016570,GO:0016573,GO:0016591,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0030880,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032947,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043933,GO:0043966,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046695,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051123,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0055029,GO:0060255,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070461,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1905368,GO:1990234,GO:2000112,GO:2001141 |
| EggNOG free text desc. | RNA polymerase II transcriptional preinitiation complex assembly |
| EggNOG OGs | COG5094@1,KOG3334@2759 |
| Ec32 ortholog description | Transcription initiation factor TFIID subunit 9B |
| Ec32 ortholog | Ec-27_005820.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011,ko03021,ko03036,ko04040 |
| Exons | 5 |
| Model size | 2905 |
| Cds size | 687 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7043.15003.1 >prot_H-paniculata_contig7043.15003.1 ID=prot_H-paniculata_contig7043.15003.1|Name=mRNA_H-paniculata_contig7043.15003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MSSSTGPKRVGMSDASSKRTAEDKAKAALDERDEKSIVKLLKDAGVKSYE
QRVVSQLVERMRRYTTEILCDARDYADHAGRVDIAMDDVRLAVRKKQDSL
TSGPPTRDDLIRLADDVNRIPLPPIPDSFGVRLPPPQYQTTLPNLQWDVE
DEPLPTPQSDVEPMDVEGAPAQGSRNKKRAKIGSKLATGKDPFTFGELNF
SGKKAQEAKDAAAKAKKRQKGNRSPVPS* back to topmRNA from alignment at H-paniculata_contig7043:2744..10465+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7043.15003.1 ID=mRNA_H-paniculata_contig7043.15003.1|Name=mRNA_H-paniculata_contig7043.15003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7722bp|location=Sequence derived from alignment at H-paniculata_contig7043:2744..10465+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTTGAAAAACTAGTCGAGACGAAGCTAGACAGCTGTACTAGCCTGGAAG
GACCTAGCTGAAGACATCATCGTCCGTGTCCACGCTCTTCTTTTGTCGAA
CCATACGTACTGTGTTGCCTTACTTTTGTGCATTTTCCCTCCAAGAAGCC
TGTCAGAGAACTGCAACAGGCCCCCTATGTTCTGTGAGAAACCTTGTTTG
AGGATAGATTGAGTGCGGCCTGTTTAGTTTAGGACCTGTTTTACAACTGA
AATTGGTACCTCTCTTCGTAGAGTTACCGTACGATGTCATCAAGTACGGG
ACCAAAGAGGGTCGGCATGTCTGACGCGAGCAGTAAGCGTACTGCCGAGG
ACAAGGCCAAAGCAGCCCTGGACGAGCGAGACGAGAAGTCGATTGTAAAG
GTAAGAGACACTTGGATGTAATCCCGTAATAGTGATGACATCACTCTCGG
AACACTTTAATACTCTCTTCAAGTCTTACTTAAGTGTTACGTAACACTGA
GCAGTTTGTTCCCACTTGCTAGTCTACTACTGTAGCCAGTGACGACAGGC
TGGGCCCACCATAAGACACCCAAAGTTTTCTACAAGCCAAATGTCACGAT
CCAAAGCGAAAATTACCACAAAAATGGGATTGCCTGCAACCGTGTAAGCA
CCACGGAGTGCGCCGCACGCTCTGATCGGCCATCCAGGCACTTTCAGCGT
TTCAAAGTCTATGACCATTCAAAATATCGACTACTAGCGGTTATTTTCAA
GCGTGTTGGTACAAAAGTCAAGTATTTTACATACATTTGTGCCGGCTTCA
TGCTCGATGTTCGCAAAATTGGTGTGCGTATTGCTGACACCACGGGGAGA
ATCGTGATACCTGTTTGGGCTCCCAATCCACCACTGTGCCAAAGTTATAG
CTGAAGCAAAATTGGGGTATAATATGTACGTGTTTGTATGGAACTAGGAC
ATAGTGGTACTTCTAGGAAACGAGCATTTCTCGCTTGGTGTTTTGGAGTT
TGGACCTGAAATTTTGGGTTAGGTGCGCATCAAAATTTCGGAGGCCGTAA
AAGGTGATACTTTTTGATATCTTTTTGTTCCGAAATAAACTGCGAATCTT
TAGACCGTAAAATCAACAAAGCACCATTATTTTCGGAGCAAAAAAACTTG
AAGGTATCGCTTTTGACGGTGTCCGAAATTTTGATGCGCACCTTCTCTCA
AAAAATTTGGTTTCTCTTGCTGGGCCCACCCTGTATTCACCTGTTTTGTT
TCGCTCAATATAGTAGTACTTTCGTTGTAGGGTAGGCTGCTAGGCCAATT
GAATCGTGCTTCTCTCTTGCATCAACAGCTAGTTCCCGAGGCGCATTCCC
TAAACAAGTCGCATGTAATATTAGTACGGTCAATTAGCAATTGGGGGTTG
AGCTGTTCGCTGCTTGGCGAATCCAAGTGCTGTAGTGCTGGATCGATTTC
CTCTCTCGATATGTTGAACATGTGGAACGTAGCAAATGTCGCGAAAGTGA
CGTCTGGCTCATGCAACGTTGCAAGCTTACTTCGTAGTGTTGCTTTCAGC
CGATTAATGTTGGCACTCGGCGCGTTCTCGATATATGTATGCACGACAGG
TGTTGAGACCATAGCAAGAAGCTTTTAGCATCAGACAATCTCCACGGCGA
TCATACCGTGCTCAGTTACTTCAGTGACCAGTGGAACAGTGTCATAGCGT
AAAATTGTATTCGTACATCATCTCGTCACACAACAAGCCTCGTCCCTCGC
TCGGTCTCTCACTCTCCGTATTTTGACTACGTCGGCATGGCAGCTGCTGA
AGGATGCTGGAGTGAAGTCGTACGAGCAGAGGGTAGTCAGCCAGCTGGTA
GAGCGCATGCGAAGTGAGTGAATGTTGAACGTTGTAACCTTAAGAGTGAA
CAAGAACAACAAAAAACCAGTACGGTTAGGAGACCATGCGAAGAGCATGC
CGTGTAAATAAACAGGCAGCACATACCTTCATAGGGCCAGCCTCAAAAAT
GTTAACTGACTGCTGCACCAGCGTGTTATCCGTGCAAGCTGTCTCTCTGC
CCATCTTAAACAATTTTGTGCTGTCCTCAATATTTTCCTCGGATGCGGAA
ACAAAATCATCACAACTCCAGGATACACAACAGAGATATTGTGCGACGCG
CGAGACTATGCTGACCACGCGGGGAGGGTCGATATAGCCATGGACGACGT
GCGATTAGCAGTGCGCAAGAAGCAAGACTCTCTCACCTCCGGGCCGCCGA
CGAGAGATGTAGGTTGTCACTTACGATTCGGATTCGGGTTAGCAGATAGG
GGTAGCGCAATCGTTCGCAACTATAGAACGTGGGGCTGAACAGAGCCTAG
TTCTTGAAAATATTACGGTATGGGTCGATTTGCTGCTATACCCACGAATC
AACATGACAACGTAACCTCTAGCTGGCTGTTTGAGGATCCCGTAGTCATC
GTCCATGGTTGAAGCAATATATACGTACTCCCTCCAGCCAGAAAGTCTGT
GCCGATAAGCACGTAGCTCTTCGAGATGACCTCCGATCTCGAAACGTTTT
TTTTGCGTTGGATTCCTTGACGCTTTTTGCATCAAAACCCTCTGTTTTCG
CTTCATCGAACACCATTCACCCACCAATCCAGCGCCTTCTCGAAGGCCTC
TCGGTCCACTGGGACCGATCTGGGCAAATATCTCTCGCGCTTCCGCTTTT
CTGGTGTTCATGTGCTCGACCTCGAAGTCGTCGTCCCCTAGCCCTTCAAG
CACCCGGTTGTACCTCTTGAAGGTACTCTGCCATACCCTTTCTAGAGTTC
CCGAGTCGTACTCACCGAAAAGCCTCTGAACCCCCTCAACGAGGTCGTCG
ATTGTGCCAAAACCCTCTCGCCAAGTCCTGCTTGTCAAAGATGCAAAGAA
CCCCAGATCGTTGATGGTGAGGTCCGGCGACTGCGCTGATTGCGTCACGA
GCTGAATGTCCCACCCCCCCTCCTTCCCTACTCTGTTCAGCTTCTCCGGT
GTGCCCTTGCCCATGTGCGGGCTCGCGCCATCTTGCTGCACAACCTCCCC
CCCCGATTCCAGCCAGGGCATCTTCTCCTTGATCGCGGGTAGAAGCTCAT
GCTCGTACCACTCGTGGTAGTACTCGGAGTCAATGGTGATGTCGATCGAG
TACTCCTAGCTCCTTTCGTGCCGTGCCGTAGTCGTCTGCGCCTCCTTCAT
GACACAAACCCGCCAAATCCCGATCTTGCCATCAAATTCACGAGAAGAAT
CCGGGTGCGACACGGCGAGAATGAACACCACTTTGGGAATGTGACTCTTG
TGCTGCATCTTTATGGGGCCCACCTTCTCCTCTCCCGAGAATATCCGCAC
CTTCTCTTTGTGGCGGATCAGGTAGCACCACGCTTCGTCGACGTGAATCG
TGTTGAAGCCAGTCTTGAACGTTCTGCGATCGCGGGTGACCTGGTCCAGG
ATCAAGTTCACCTGGTTCTTCTTGTGGTGGAACGAAAGGCTTGGGTGATG
CGCCGCTGAACCCTCGTTGCTCCCATGGCCTTCAGCCAGTTGTGAAAGTG
CGGTCCGACCTTCCTTGGACAGTTCACAATTTTTTCCCCGGCTCGTCGGA
CTCTGAGGGCTCGCCATGGGGGTGATACGCGCGCCGCGAGCGAGGTGGTT
CAAGGTGCCCGCTTTCTGTCGATGTTGTTGGAATCATGTGCGGCCTTCAC
GGTGCACGACGTCCATTCAAAAGGATCTGAACATGCCCACTTTTGTATCC
TAGTTTTTCAGAAGATAATCGGAATTCAAATACCCCATCTGATGCAAAAA
ACCGTTTTGAAATCGGAGATCATCCCGAAGATTTTCATGCTTATCGGCAC
AGAATTTCTGTCTAGAGGGAGTATATGTATATATATCTTATTTATTGACG
TATTCAACGACTTCTGAAGTTTAGATCCCAATGAGCGGCGCGCTATTGAT
AGGGGTTAACTTTCTTTTAAACTAAATCACCAGTAGAGCTCTAGATCTGT
ACCCCGAAACATGAAAAGGAAATAGTTTCGTCCTCGTTTATCGGGAAATA
GTTGTCGCCCCCACCTTCGAAGCACCACGCATGCAATACCTTTTGTCGAC
GGCACACGGGGTAGCTTGACCATGATCATCCTCAGAGCCGAAGCCTCTCT
TCGTCACAGTCCACAATTCACTACACAGATAATAGGACATGCCACTGCAG
CGAAAATACAACAGTCACCATGGAGCGCTTGTCAACCGCTTTGGCTTCCG
AGGCTGTAACTCTAAACCCCCGCACCCAATTTGCCAAACCATACCCGCGC
GTCTCGGCCTTCTGTAACTACTTAACAACAACAGGATTTGATTCGTCTAG
CGGATGATGTGAACAGGATACCGCTGCCTCCAATTCCGGACAGTTTCGGA
GTACGGTTACCGCCGCCGCAGTACCAAACGACCTTGCCGAATCTTCAATG
GGACGTGGAGGATGAGCCATTGCCAACACCCCAGTCCGATGTGGAACCGG
TGAGAGGTCGGGCGAGGGCATTCTCATGTTTTGAATGCCTCTGCTGCGTT
ATGATTGGTCGGGCATCCTCGAAAGGGTGGACCTTGCTTGTGAAAAGAGT
GACCTCTGGTGGTCAATCGCTCCTCGCTACGTTGCCAAAGTTGGCTCGGG
GAGGGCCGGGAGTAGTCTTTTGTAGGAATTTTGGTTGGATAGCTGTAGGT
AGCTAGGCTGCAACGGACATTTCGACAGTTGGTTGGTGCCGCCCGCACTC
ATGACCCACACGAAATGACCGCAACCCCAGTGTTAATCAAACTGTGGGAA
AGATTGGACCTCCCCGTCGTCTGAGTCCGACAGCGAAATGACGACACATG
TAGGGGGCTGCTCGTTGTCTTCGTGATCGTCGCTGTCTGTACTGTGTATG
TTGGACACAGAGATCACGGAACCAGTCATTATCAGTTAGCAATGGCCATC
GCACCAGTGCCGTAGATCTCCACTGTCTACGGTCTTGTATTTATGCGATA
TTGGAACTTGAGAGTGACTGCAGCTCCTCGAGCACGGCTTCGCCAGTGCA
ATGAATGCTTTTGCCACCTTACTCGCACCAAGCGCACGAGGGCTCTCTAC
CCTGTGAAGGGTCGACCATTTTGTCTGTAAGGCCGGCCCACCCGAGAGGA
AACGTTTAAAACGTGCTTGATTTAGTTGTGCATTTGGAGATGTATTTCCC
TTGATATGTTGTCATTTTCCAAGGTACCAAAACCTTGAATCAGGGATGCT
GTGCACGTCCGACGTGCCGATTAGAGGATCACTCACTGCGCTCTTGCGCA
ATAGAGTAAACCCTTGGTAGATCTCGCGCCCTGTGCTATGTTCTGTGCTG
GTCATATTCATGATTTTTTAGACAAAAGACCTGGTGGGACTGCAGTCCCC
ACCACCCCACCTAAGTAGAGCATACCCCTATGCCGCCATGAATAACTGTC
GACATGGGAATAAAGTCTACTCGTGCGCGATGTCTCACTATACATCTTGG
GGTGCCGGGACAGGAAATCACAATGTTTGTGATGAGCTTTTTTGAGCGCG
TAACTCGTTGTTTATGGTTCGCCTCTTGTGTCGTCGTAGATGGACGTGGA
AGGGGCACCCGCGCAAGGGTCGAGAAACAAGAAAAGGGCTAAGATCGGCT
CGAAGTTGGCAACGGGGAAAGACCCATTTACATTCGGGGAGTTGAACTTT
TCGGGGAAGAAGGCACAGGAAGCGAAAGACGCGGCGGCTAAGGCGAAGAA
AAGGCAAAAAGGAAACAGATCACCTGTCCCCTCGTAGAGAATATTCAACT
TGCGGCCAGCGCGTCTACGCGGTCATATATCACCCTGCATGCCCTTGCAG
AAGATTAACCGGAATATATGCAGTGGGCTCTATCTCTATCGCTCATTTTG
AATTCACGGCGAACTGGATAACGTGCCTCTGTAAACTGTGTCGTGTCTTT
CCCATTTTCCACATTATGGGCGGTGATGGGCCGAGGTCGTGTTGGCAATG
CCGAGGGTAACTGAAACACCGGAAATGAAAAACGTTGGCAAATACCGGGT
TTGCTTATATCGGAAATTTCGGAATTGAAAAAAAAAACCCGGAAAATTAA
AAAGCATGATGCATGCAGACTAGAAAATACTGGCAGTTACAACGGCCCTG
AGAATGCAAGAGGTTGGGTATTGTTTCGCATATCCGGTCCGATGTCGGGG
TTCATTTTTTTACAGGTCGTTGTCGAAGGTTCGCCTTAGCGAGGTTGTTG
GAGGTCTTTTTGGGTGTCGATTGTCAGAGTCGTTGAGCTATAGTTGTAGA
AAGGGCCGTTTTGATCTCTCCCCCCATTGCTGGCATGCATGTTCAGCAGC
TACTGTAATAGTCGACGCTCTCGTTCATAGTGAGGGGTGGGGAAACAATA
TTTTTACCTATCATGCTCATGTTATGCAGCTCACACACAGCTCACAGCTG
CTTGTAAACTACTCATGACACCAGTTTGTACTCTCTCTGTTTCTCGCTCA
TCGTTTGCATATTCCGTTTCGTGAAAAGGTGGGGAACTGACCTCAACAGA
CGTTGGGTAATTGATACCCTATCAAAGGTATTTCTAAGGTGGCCATCACA
TTTTGTTTGGTTGGTTGTCAGGAAGAGTAACATTGTATTGATAAGATACA
GCATGCCACAGAGCCCGAGGGAGATTCAGTAGAAGTAGACGAAGAAGGGA
TGATGATGTCTCTATACTACATGCGCGATTGAGGTTATATATCTTGTGTT
TGTGTACGACGAGAGATGACAAATAGAAGCGACGGCGTTGATATGTTGAC
CTATAAAGAAATCTCCGGATAAAAAATCCCGCAAAACAATTTCGCTTTGC
GAATGTGTGGTCAAACATACATATATTGTACAGAAAACAGTGGCAGGCCA
ACGTGTCCGCAAATAACGCACAGCAGCAAGTAACATGGCGCAAGGATATC
AAGTCTTCGACAAGAGCCTATCTCGTCAACACTGGAGGCTGGCGCAATGA
AGGTAAAGCGCTATGGAATGAGTCACCACGACATTGCCAGGCGACCTGAC
TCTTAGCGATCAGATCACATTTGGTTCTAGCGGTGTCCAAGATATTGCTG
TTGACAGGGCAAGAAGGGGTGATGAAGACTGGGGGTGCTTGGTGGTCATT
TGGCCATCAGCTGGAATTGCAGTGCCGATATTACATTGGAAAAAAAGACA
GGAAACGGACTGGCGCTGGCAACCAGTAGCTAGAGAAGTTGACAGTACAT
ATAGCAGCTGGGCCTTAGCAGAGGGGGTGGTTCTCACTCTATGGTAGCTG
TGGTCATGGTTGAGGTGTTTTGGCTTTTGTTACACAACCTTGCTTGCCGA
GCGAAACGGCCACACCCAACCCTAACCCTACACCTTTCACCATCCCTTGG
GGTGTCGAATCTGGCCCATAGAGCGTCTAGAATCAACCAGCCGCGGTGTG
ATAACCGCAAAAACGGCACGTCCTGAAGCCAGATTAGAGGATTCGGGCAG
GTATCGTAGTATAAATAGGTAAAGCCAAATCGACAATGGTATGAGGCCTA
ACCGGAGTATACTCTACTGTTTTACCATGAAGTCTGCCATTCTCCAAAAT
TTTCGAGGGGGGGGAATTTACGAAAAATCAGAATCGGAAAACAGACTCGC
GCGTATAGCATGGGCCTGAGAGCGGAGAGCGGAGGGTTTCATCAGTGGTG
GAGCGAAAGCGTCTGCCCCCTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7043:2744..10465+ >mRNA_H-paniculata_contig7043.15003.1 ID=mRNA_H-paniculata_contig7043.15003.1|Name=mRNA_H-paniculata_contig7043.15003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1374bp|location=Sequence derived from alignment at H-paniculata_contig7043:2744..10465+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCATCAAGTACGGGACCAAAGAGGGTCGGCATGTCTGACGCGAGCAG
TAAGCGTACTGCCGAGGACAAGGCCAAAGCAGCCCTGGACGAGCGAGACG
AGAAGTCGATTGTAAAGATGTCATCAAGTACGGGACCAAAGAGGGTCGGC
ATGTCTGACGCGAGCAGTAAGCGTACTGCCGAGGACAAGGCCAAAGCAGC
CCTGGACGAGCGAGACGAGAAGTCGATTGTAAAGCTGCTGAAGGATGCTG
GAGTGAAGTCGTACGAGCAGAGGGTAGTCAGCCAGCTGGTAGAGCGCATG
CGAACTGCTGAAGGATGCTGGAGTGAAGTCGTACGAGCAGAGGGTAGTCA
GCCAGCTGGTAGAGCGCATGCGAAGATACACAACAGAGATATTGTGCGAC
GCGCGAGACTATGCTGACCACGCGGGGAGGGTCGATATAGCCATGGACGA
CGTGCGATTAGCAGTGCGCAAGAAGCAAGACTCTCTCACCTCCGGGCCGC
CGACGAGAGATGATACACAACAGAGATATTGTGCGACGCGCGAGACTATG
CTGACCACGCGGGGAGGGTCGATATAGCCATGGACGACGTGCGATTAGCA
GTGCGCAAGAAGCAAGACTCTCTCACCTCCGGGCCGCCGACGAGAGATGA
TTTGATTCGTCTAGCGGATGATGTGAACAGGATACCGCTGCCTCCAATTC
CGGACAGTTTCGGAGTACGGTTACCGCCGCCGCAGTACCAAACGACCTTG
CCGAATCTTCAATGGGACGTGGAGGATGAGCCATTGCCAACACCCCAGTC
CGATGTGGAACCGGATTTGATTCGTCTAGCGGATGATGTGAACAGGATAC
CGCTGCCTCCAATTCCGGACAGTTTCGGAGTACGGTTACCGCCGCCGCAG
TACCAAACGACCTTGCCGAATCTTCAATGGGACGTGGAGGATGAGCCATT
GCCAACACCCCAGTCCGATGTGGAACCGATGGACGTGGAAGGGGCACCCG
CGCAAGGGTCGAGAAACAAGAAAAGGGCTAAGATCGGCTCGAAGTTGGCA
ACGGGGAAAGACCCATTTACATTCGGGGAGTTGAACTTTTCGGGGAAGAA
GGCACAGGAAGCGAAAGACGCGGCGGCTAAGGCGAAGAAAAGGCAAAAAG
GAAACAGATCACCTGTCCCCTCGTAGATGGACGTGGAAGGGGCACCCGCG
CAAGGGTCGAGAAACAAGAAAAGGGCTAAGATCGGCTCGAAGTTGGCAAC
GGGGAAAGACCCATTTACATTCGGGGAGTTGAACTTTTCGGGGAAGAAGG
CACAGGAAGCGAAAGACGCGGCGGCTAAGGCGAAGAAAAGGCAAAAAGGA
AACAGATCACCTGTCCCCTCGTAG back to top
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