prot_H-paniculata_contig7023.14972.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7023.14972.1
Unique Nameprot_H-paniculata_contig7023.14972.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length217
Homology
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A2H9ZU53_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZU53_9ASPA)

HSP 1 Score: 170 bits (430), Expect = 8.200e-47
Identity = 88/196 (44.90%), Postives = 122/196 (62.24%), Query Frame = 0
Query:   22 QTTERLELLHTDIAGPAD-ECFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            + T  LEL+++D+ GP   E   GSR+ I F+DDY RM  VY L++KSEAL   K F+  V + +G  IK LR+DRG EF    F+ F  ENGI +E +A YTP++NGVAER  R++ EM +S +    + ++ WA +   AVY LN +PT+       YE W+G  S++ HL++FGC AYV   S  R K EDK+
Sbjct:  179 RATHPLELVYSDLCGPMRIESLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLNISPTKAILNRTLYEVWKGRKSRISHLKIFGCIAYVYVNSHDRHKLEDKS 374          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A3S3NIE3_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3NIE3_9ACAR)

HSP 1 Score: 166 bits (420), Expect = 1.010e-43
Identity = 84/217 (38.71%), Postives = 123/217 (56.68%), Query Frame = 0
Query:    1 ICSTCERREASNKPVNKYWEEQTTERLELLHTDIAGPAD-ECFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            +C +C + + + KP  K  +  T E LEL+H+D+ GP       G R+ + F+D Y R  + Y L +KSEA     +++  V K+TG QIK  RSD G E+T + F +++ +NGI  +++A YTPQ+NGVAER  R++ EM +S +    M    W  A   A Y  N  P +  NG  PYE W      L H+RVFGC A+V    ++R K++ KA
Sbjct:  229 LCESCVKGKTTRKPFPKKSDSMTKEVLELVHSDVCGPMQTNTVSGRRYFVTFIDYYSRYTETYLLFNKSEAFEMFIEYKNKVEKSTGKQIKVFRSDNGTEYTCKRFEEYFVKNGIVHQYTAPYTPQQNGVAERKNRTLVEMARSMLFCAQMNKNFWGEAIVTATYIQNSCPNKALNGKTPYELWFEKRPSLKHMRVFGCEAFVHVPDEKRRKWDPKA 445          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A251S6V1_HELAN (Putative zinc finger, CCHC-type, Ribonuclease H-like domain, GAG-pre-integrase domain protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S6V1_HELAN)

HSP 1 Score: 160 bits (406), Expect = 6.700e-42
Identity = 85/216 (39.35%), Postives = 123/216 (56.94%), Query Frame = 0
Query:    1 ICSTCERREASNKPVNKYWEEQTTERLELLHTDIAGPAD-ECFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDK 215
            IC  C   + + KP +K    + +E L+L+H+DI GP   +   G R+ I F+DD+ R   VY L+ KS+AL   + F+R      G +IK +R+DRG E+ G  F+ F  ENGI  + + +YTPQ+NGVAER  R++ E+++S +    + + +WA A   A Y LNR  T+      P E W G    +DHLR+FGC AYV    Q R K + K
Sbjct:  468 ICEGCIFGKHARKPFSKKAVWRASEPLQLIHSDICGPMKTQSIGGCRYFITFIDDFSRKTWVYFLKFKSQALSYFRNFKRLAENQVGYKIKSMRTDRGGEYCGHEFQNFLKENGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMMKMKELPNMYWAEAVSCATYLLNRTITKSVPELTPQEVWSGRKPNVDHLRIFGCIAYVHIPKQNRTKLDVK 683          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A151RAI6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RAI6_CAJCA)

HSP 1 Score: 159 bits (403), Expect = 1.000e-41
Identity = 83/190 (43.68%), Postives = 110/190 (57.89%), Query Frame = 0
Query:   27 LELLHTDIAGPA-DECFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDK 215
            LEL+HTD+ GP        +R+ I F+DD+ +M  VY L+ KSE     K+F+  V K +G QIK  RSDRG E+T   F KF  + GI+Q+ + AYTPQ+NGV+ER  R+V EM +S +    + +  WA A   AVY LNR PT+      P E W G      HLRVFG   Y+    ++R K EDK
Sbjct:  489 LELIHTDVCGPMRTPSHTNNRYFILFIDDFSKMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVFRSDRGKEYTSREFDKFCEDEGIEQQLTVAYTPQKNGVSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVQDKTPIEAWSGQKPSTKHLRVFGSICYIHVLDEKRHKLEDK 678          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A251T2S6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T2S6_HELAN)

HSP 1 Score: 160 bits (405), Expect = 1.090e-41
Identity = 85/216 (39.35%), Postives = 123/216 (56.94%), Query Frame = 0
Query:    1 ICSTCERREASNKPVNKYWEEQTTERLELLHTDIAGPAD-ECFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDK 215
            IC  C   + + KP +K    + +E L+L+H+DI GP   +   G R+ I F+DD+ R   VY L+ KS+AL   + F+R      G +IK +R+DRG E+ G  F+ F  ENGI  + + +YTPQ+NGVAER  R++ E+++S +    + + +WA A   A Y LNR  T+      P E W G    +DHLR+FGC AYV    Q R K + K
Sbjct:  390 ICEGCIFGKHARKPFSKKAVWRASEPLQLIHSDICGPMKTQSIGGCRYFITFIDDFSRKTWVYFLKFKSQALSYFRNFKRLAENQIGYKIKSMRTDRGGEYCGHEFQNFLKENGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMMKMKELPNMYWAEAVSCATYLLNRTITKSVPELTPQEVWSGRKPNVDHLRIFGCIAYVHIPKQNRTKLDVK 605          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A5N6M7D6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M7D6_9ASTR)

HSP 1 Score: 159 bits (403), Expect = 1.400e-41
Identity = 85/219 (38.81%), Postives = 126/219 (57.53%), Query Frame = 0
Query:    1 ICSTCE--RREASNKPVNKYWEEQTTERLELLHTDIAGPADECFE-GSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            IC TC   ++   N P   +W  ++TE+LEL+HTD+ GP     + G R+ + F+DD  R   VY L+ K E+    K+F+  V   +G +IK LRSDRG EF  ++F +F A++GIK++ +AAYTPQ+NGVAER  R++  M +  +    +    W  A   AV+ LNR  TR  +   P E W G    +++ RVFGC  +V   SQ R K + ++
Sbjct:  477 ICETCNVGKQNRENIPKKSWW--RSTEKLELIHTDLCGPITPASQSGKRYVLVFIDDLTRKTWVYLLQFKHESFDAFKRFKVAVENESGCKIKALRSDRGGEFNSQSFNEFCAQSGIKRQLTAAYTPQQNGVAERRNRTIMNMVRCSLTDKKVPKCFWPEAVNWAVHVLNRCITRALDDKVPEEMWSGKKPNVEYFRVFGCIGHVHIPSQFRSKLDARS 693          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A251TN47_HELAN (Putative zinc finger, CCHC-type n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TN47_HELAN)

HSP 1 Score: 160 bits (404), Expect = 1.530e-41
Identity = 85/216 (39.35%), Postives = 125/216 (57.87%), Query Frame = 0
Query:    1 ICSTCERREASNKPVNKYWEEQTTERLELLHTDIAGPADE-CFEGSRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDK 215
            +C  C   + + KP +K  + + +E L+L+H+DI GP +     G ++ I F+DD+ R   VY L+ KS+AL   K F++ V      +IK +R+DRG E+ G  F+ F   NGI  + + +YTPQ+NGVAER  R++ E+++S +    + + +WA A   A Y LNRA T+      P E W G    +DHLRVFGC AYV    Q R K +DK
Sbjct:  473 VCEGCVFGKHARKPFSKKAKWRASEPLQLVHSDICGPMNTPSIGGCKYFITFIDDFSRKTWVYFLKLKSDALHYFKIFKQLVENQIERKIKGIRTDRGGEYCGHEFQNFLKNNGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMLKMKELPNTYWAEAVACATYLLNRATTKSVPKLTPQEAWSGKKPNVDHLRVFGCIAYVHIPKQHRSKLDDK 688          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A5H2YBV8_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2YBV8_PRUDU)

HSP 1 Score: 159 bits (402), Expect = 2.530e-41
Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 0
Query:   27 LELLHTDIAGPADECFEG-SRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            LEL+H+D+ GP +    G +R+ + F+DDY R   VY L++KSE     K F+    K +G  +K LRSD+G EF+   F  F  ENGIK +F+A YTPQ+NGVAER  R++ E+ +S +    M +R WA A   AVY LNRA +    G  P E W G    + HLR+FG  AY     + R K +DK+
Sbjct:  556 LELVHSDVCGPMNTTSTGGNRYFLTFIDDYSRKTWVYFLKYKSEVFDYFKVFKALAEKQSGFALKTLRSDQGGEFSSNVFENFLKENGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 746          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A4Y1RY62_PRUDU (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RY62_PRUDU)

HSP 1 Score: 159 bits (402), Expect = 2.660e-41
Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 0
Query:   27 LELLHTDIAGPADECFEG-SRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            LEL+H+D+ GP +    G +R+ + F+DDY R   VY L++KSE     K F+    K +G  +K LRSD+G EF+   F  F  ENGIK +F+A YTPQ+NGVAER  R++ E+ +S +    M +R WA A   AVY LNRA +    G  P E W G    + HLR+FG  AY     + R K +DK+
Sbjct:  152 LELVHSDVCGPMNTTSTGGNRYFLTFIDDYSRKTWVYFLKYKSEVFDYFKVFKALAEKQSGFALKTLRSDQGGEFSSNVFENFLKENGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 342          
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Match: A0A4Y1RM74_PRUDU (Transposable element protein n=7 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RM74_PRUDU)

HSP 1 Score: 159 bits (402), Expect = 2.850e-41
Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 0
Query:   27 LELLHTDIAGPADECFEG-SRFAIFFLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEFTGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNMGHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTAYVMFQSQQRFKFEDKA 216
            LEL+H+D+ GP +    G +R+ + F+DDY R   VY L++KSE     K F+    K +G  +K LRSD+G EF+   F  F  ENGIK +F+A YTPQ+NGVAER  R++ E+ +S +    M +R WA A   AVY LNRA +    G  P E W G    + HLR+FG  AY     + R K +DK+
Sbjct:  556 LELVHSDVCGPMNTTSTGGNRYFLTFIDDYSRKTWVYFLKYKSEVFDYFKVFKALAEKQSGFALKTLRSDQGGEFSSNVFENFLKENGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 746          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7023.14972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H9ZU53_9ASPA8.200e-4744.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A3S3NIE3_9ACAR1.010e-4338.71Uncharacterized protein (Fragment) n=1 Tax=Dinothr... [more]
A0A251S6V1_HELAN6.700e-4239.35Putative zinc finger, CCHC-type, Ribonuclease H-li... [more]
A0A151RAI6_CAJCA1.000e-4143.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A251T2S6_HELAN1.090e-4139.35Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A5N6M7D6_9ASTR1.400e-4138.81Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A251TN47_HELAN1.530e-4139.35Putative zinc finger, CCHC-type n=2 Tax=Helianthus... [more]
A0A5H2YBV8_PRUDU2.530e-4142.93Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A4Y1RY62_PRUDU2.660e-4142.93NAD(P)-binding Rossmann-fold superfamily protein n... [more]
A0A4Y1RM74_PRUDU2.850e-4142.93Transposable element protein n=7 Tax=Prunus dulcis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 25..137
e-value: 7.6E-18
score: 64.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 10..187
score: 17.94
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 18..208
e-value: 6.4E-29
score: 102.6
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 59..215
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 59..215
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 24..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7023contigH-paniculata_contig7023:666..1316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7023.14972.1mRNA_H-paniculata_contig7023.14972.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7023 666..2249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7023.14972.1 ID=prot_H-paniculata_contig7023.14972.1|Name=mRNA_H-paniculata_contig7023.14972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
ICSTCERREASNKPVNKYWEEQTTERLELLHTDIAGPADECFEGSRFAIF
FLDDYRRMRKVYALRHKSEALWTLKQFERDVAKATGLQIKHLRSDRGAEF
TGETFRKFYAENGIKQEFSAAYTPQRNGVAERSWRSVFEMTQSKVITVNM
GHRHWAGAARAAVYCLNRAPTRPHNGGAPYEKWQGTTSKLDHLRVFGCTA
YVMFQSQQRFKFEDKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf