prot_H-paniculata_contig6958.14896.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6958.14896.1
Unique Nameprot_H-paniculata_contig6958.14896.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length215
Homology
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 1.380e-132
Identity = 188/212 (88.68%), Postives = 204/212 (96.23%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDR--YEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            R LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+E+EI+SVLDLTEAILSRFGFDR  Y+IMLSTRPEKSVGTDEIW+LATE L+ AL+RKGW Y+ ++GGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLP+RF+LEYIDS+GE+KQPVMLHRAIFGS+ERFFGILVENTAGTFPLWLAPEQMRLLPVTD ARDYCLEV
Sbjct:  389 RHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVYQIMLSTRPEKSVGTDEIWDLATEGLKAALERKGWDYSVDEGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPDRFKLEYIDSSGERKQPVMLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEV 600          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S1GIN9_CYCTE (Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIN9_CYCTE)

HSP 1 Score: 360 bits (923), Expect = 9.400e-123
Identity = 163/210 (77.62%), Postives = 191/210 (90.95%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            R+LPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+++EIV VLDL E ILSRFGF++Y++MLSTRPEKSVG+D+IWE AT  L GAL+ KGW YT ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLPERF+LEY  ++G++++P+M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTD+ +D+C EV
Sbjct:   57 RELPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLAEKILSRFGFNKYDVMLSTRPEKSVGSDDIWEAATAGLEGALKAKGWDYTVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFDLEYRAASGDRERPIMVHRAIFGSIERFFGILVENTAGDFPLWLAPVQLKLLPVTDSVQDFCAEV 266          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S2S854_9STRA (Threonine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S854_9STRA)

HSP 1 Score: 367 bits (942), Expect = 6.310e-121
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++ EIV VL LTE IL+RFGFD+YEIMLSTRPEKSVG+D+IW+ AT AL GAL  KGW YT ++GGGAFYGPKIDLKIRDAIGR+WQCSTVQ DFNLP+RF LEY+ + G K+QP+M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTDA  DYC+EV
Sbjct:  388 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLSLTEQILTRFGFDKYEIMLSTRPEKSVGSDKIWDTATAALEGALDAKGWDYTIDEGGGAFYGPKIDLKIRDAIGRSWQCSTVQCDFNLPDRFGLEYVSAEGTKEQPIMVHRAIFGSIERFFGILVENTAGDFPLWLAPTQLKLLPVTDAVMDYCMEV 597          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A1E7EYI6_9STRA (Threonine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYI6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.100e-119
Identity = 166/210 (79.05%), Postives = 189/210 (90.00%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLPIRW ELGTVYRYERSGTLHGL RVRGFTQDDAHIFCLP Q+E+EIV VLDLTE+IL++FGFD+Y++MLSTRPEK+VG+D+IWE AT+AL GAL RKGW Y  ++GGGAFYGPKIDLKIRDAIGR WQCST+Q DFNLPERFELEY  +   K++P+M+HRAIFGS+ERFFGIL+EN  G FPLWLAPEQMRLLPVTDAA+DYC EV
Sbjct:  326 RDLPIRWGELGTVYRYERSGTLHGLFRVRGFTQDDAHIFCLPTQLEDEIVQVLDLTESILTKFGFDKYDVMLSTRPEKAVGSDDIWEAATKALEGALVRKGWPYKIDEGGGAFYGPKIDLKIRDAIGRQWQCSTIQCDFNLPERFELEYKTADNTKERPIMVHRAIFGSLERFFGILIENCEGNFPLWLAPEQMRLLPVTDAAQDYCYEV 535          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A1Z5K8X1_FISSO (Threonine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X1_FISSO)

HSP 1 Score: 362 bits (930), Expect = 2.270e-119
Identity = 165/210 (78.57%), Postives = 190/210 (90.48%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+E+EIV VLDLTE ILSRFGFD+Y+IMLST+PEK+VG+D+IWE AT+AL GAL++KGW+Y  ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLP+RF LEY+ + G ++QP+M+HRAIFGS+ERFFGIL+EN +G FPLWLAP Q +LLPVTDA  DYC EV
Sbjct:  373 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVSAEGTREQPIMVHRAIFGSMERFFGILIENCSGDFPLWLAPTQFKLLPVTDAVHDYCNEV 582          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.580e-118
Identity = 166/210 (79.05%), Postives = 189/210 (90.00%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHI+CLP Q++EEIV+VLDLTE ILSRFGFD+Y++MLSTRPEKSVG DEIW+ AT AL+GAL  KGW Y+ ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLP+RF LEY+D+  +KKQP+M+HRAIFGSVERFFGIL+ENT G FPLW+AP Q++LLPVTD   D+C EV
Sbjct:  399 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIYCLPSQLQEEIVAVLDLTEGILSRFGFDQYDVMLSTRPEKSVGGDEIWDAATVALKGALVAKGWDYSVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVDADTKKKQPIMVHRAIFGSVERFFGILIENTEGNFPLWMAPTQLKLLPVTDVVLDFCHEV 608          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S2SSP0_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP0_9STRA)

HSP 1 Score: 359 bits (922), Expect = 2.410e-118
Identity = 165/207 (79.71%), Postives = 187/207 (90.34%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYC 207
            RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+ +EIV VLDLTE ILS+FGF+ YE+MLSTRPEKSVG+DEIW+ AT AL+  LQRKGW+Y  ++GGGAFYGPKID+KIRDAIGRTWQCST+Q DFNLPERF+LEY+ S G++++P+M+HRAIFGSVERFFGILVE+TAG  PLW AP QMRLLPVTD AR YC
Sbjct:  355 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLSDEIVGVLDLTEQILSKFGFNNYEVMLSTRPEKSVGSDEIWDAATAALQDGLQRKGWEYKVDEGGGAFYGPKIDIKIRDAIGRTWQCSTIQCDFNLPERFDLEYVASEGDRQRPIMVHRAIFGSVERFFGILVESTAGDLPLWCAPVQMRLLPVTDEARAYC 561          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 358 bits (918), Expect = 2.040e-117
Identity = 163/210 (77.62%), Postives = 187/210 (89.05%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+++EIV VLDLTE ILSRFGFD+Y++MLSTRPEKSVG+DEIW+ AT AL GAL+ KGW Y  ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLPERF LEY  + G +++P+M+HRAIFGS+ERFFGIL+EN +G FPLWLAP Q++LLPVTDA  +YC E+
Sbjct:  379 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKVKGWDYNVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFGLEYASADGTRERPIMVHRAIFGSIERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVHEYCNEI 588          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A6S8UE83_9STRA (Threonine--tRNA ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8UE83_9STRA)

HSP 1 Score: 357 bits (916), Expect = 4.400e-117
Identity = 163/210 (77.62%), Postives = 189/210 (90.00%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            RDLPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP+Q+++EIV VL+L E ILSRFGFD YEIMLST+P+KSVG+D+IWE AT AL GAL+RKGW+Y  +DGGGAFYGPKID+KIRDAIGRTWQCSTVQ DFNLPERF LEY+ + G K++P+M+HRAIFGS+ERFFGILVE+TAG FP WLAP Q++LLPVTDA + +C E+
Sbjct:  381 RDLPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQLQDEIVGVLNLIETILSRFGFDDYEIMLSTQPDKSVGSDDIWESATAALEGALKRKGWEYGIDDGGGAFYGPKIDIKIRDAIGRTWQCSTVQCDFNLPERFGLEYVSAEGVKERPIMVHRAIFGSIERFFGILVESTAGEFPFWLAPTQLKLLPVTDAVKPFCQEI 590          
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 353 bits (906), Expect = 6.930e-117
Identity = 160/210 (76.19%), Postives = 189/210 (90.00%), Query Frame = 0
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 210
            R+LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+E+E+V VLDLTE+ILSRFGFD YEI LSTRPEKSVG+D+IW+ A  ALRGAL+RKGW +  ++GGGAFYGPKIDLKI+DAIGRTWQCST+Q DFNLPERF+LEY+ +   +++P+M+HRAIFGS+ERFFGILVENTAG FP+WLAP Q++LLPVT+  R +C +V
Sbjct:  275 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFDNYEINLSTRPEKSVGSDDIWDKAETALRGALKRKGWDFAVDEGGGAFYGPKIDLKIKDAIGRTWQCSTIQCDFNLPERFDLEYVSADSSRQRPIMVHRAIFGSIERFFGILVENTAGDFPVWLAPVQLKLLPVTEEFRPFCNQV 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBI8_9PHAE1.380e-13288.68Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S1GIN9_CYCTE9.400e-12377.62Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclopho... [more]
A0A7S2S854_9STRA6.310e-12180.48Threonine--tRNA ligase n=1 Tax=Eucampia antarctica... [more]
A0A1E7EYI6_9STRA1.100e-11979.05Threonine--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A1Z5K8X1_FISSO2.270e-11978.57Threonine--tRNA ligase n=2 Tax=Fistulifera solaris... [more]
A0A7S1VGN3_9STRA1.580e-11879.05Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]
A0A7S2SSP0_9STRA2.410e-11879.71Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
B5Y5F7_PHATC2.040e-11777.62Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico... [more]
A0A6S8UE83_9STRA4.400e-11777.62Threonine--tRNA ligase n=1 Tax=Chaetoceros debilis... [more]
A0A7S0D919_9EUKA6.930e-11776.19Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002320Threonine-tRNA ligase, class IIaPRINTSPR01047TRNASYNTHTHRcoord: 159..172
score: 68.88
coord: 116..144
score: 54.93
coord: 186..198
score: 50.82
coord: 14..37
score: 67.11
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 1..213
NoneNo IPR availableGENE3D3.30.930.10coord: 1..183
e-value: 2.0E-79
score: 269.0
NoneNo IPR availablePANTHERPTHR11451:SF31THREONINE--TRNA LIGASEcoord: 1..213
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..178
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 179..211
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 2..180
e-value: 2.3E-35
score: 122.2
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..198
score: 19.894

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6958contigH-paniculata_contig6958:9249..11600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6958.14896.1mRNA_H-paniculata_contig6958.14896.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6958 9249..11600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6958.14896.1 ID=prot_H-paniculata_contig6958.14896.1|Name=mRNA_H-paniculata_contig6958.14896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIV
SVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRK
GWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYI
DSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVT
DAARDYCLEVCMRMI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa
IPR002314aa-tRNA-synt_IIb
IPR006195aa-tRNA-synth_II