mRNA_H-paniculata_contig6958.14896.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6958.14896.1
Unique NamemRNA_H-paniculata_contig6958.14896.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 1.380e-132
Identity = 188/212 (88.68%), Postives = 204/212 (96.23%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDR--YEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            R LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+E+EI+SVLDLTEAILSRFGFDR  Y+IMLSTRPEKSVGTDEIW+LATE L+ AL+RKGW Y+ ++GGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLP+RF+LEYIDS+GE+KQPVMLHRAIFGS+ERFFGILVENTAGTFPLWLAPEQMRLLPVTD ARDYCLEV
Sbjct:  389 RHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVYQIMLSTRPEKSVGTDEIWDLATEGLKAALERKGWDYSVDEGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPDRFKLEYIDSSGERKQPVMLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEV 600
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S1GIN9_CYCTE (Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIN9_CYCTE)

HSP 1 Score: 360 bits (923), Expect = 9.400e-123
Identity = 163/210 (77.62%), Postives = 191/210 (90.95%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            R+LPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+++EIV VLDL E ILSRFGF++Y++MLSTRPEKSVG+D+IWE AT  L GAL+ KGW YT ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLPERF+LEY  ++G++++P+M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTD+ +D+C EV
Sbjct:   57 RELPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLAEKILSRFGFNKYDVMLSTRPEKSVGSDDIWEAATAGLEGALKAKGWDYTVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFDLEYRAASGDRERPIMVHRAIFGSIERFFGILVENTAGDFPLWLAPVQLKLLPVTDSVQDFCAEV 266
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S2S854_9STRA (Threonine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S854_9STRA)

HSP 1 Score: 367 bits (942), Expect = 6.310e-121
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++ EIV VL LTE IL+RFGFD+YEIMLSTRPEKSVG+D+IW+ AT AL GAL  KGW YT ++GGGAFYGPKIDLKIRDAIGR+WQCSTVQ DFNLP+RF LEY+ + G K+QP+M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTDA  DYC+EV
Sbjct:  388 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLSLTEQILTRFGFDKYEIMLSTRPEKSVGSDKIWDTATAALEGALDAKGWDYTIDEGGGAFYGPKIDLKIRDAIGRSWQCSTVQCDFNLPDRFGLEYVSAEGTKEQPIMVHRAIFGSIERFFGILVENTAGDFPLWLAPTQLKLLPVTDAVMDYCMEV 597
[Close]
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A1E7EYI6_9STRA (Threonine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYI6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.100e-119
Identity = 166/210 (79.05%), Postives = 189/210 (90.00%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLPIRW ELGTVYRYERSGTLHGL RVRGFTQDDAHIFCLP Q+E+EIV VLDLTE+IL++FGFD+Y++MLSTRPEK+VG+D+IWE AT+AL GAL RKGW Y  ++GGGAFYGPKIDLKIRDAIGR WQCST+Q DFNLPERFELEY  +   K++P+M+HRAIFGS+ERFFGIL+EN  G FPLWLAPEQMRLLPVTDAA+DYC EV
Sbjct:  326 RDLPIRWGELGTVYRYERSGTLHGLFRVRGFTQDDAHIFCLPTQLEDEIVQVLDLTESILTKFGFDKYDVMLSTRPEKAVGSDDIWEAATKALEGALVRKGWPYKIDEGGGAFYGPKIDLKIRDAIGRQWQCSTIQCDFNLPERFELEYKTADNTKERPIMVHRAIFGSLERFFGILIENCEGNFPLWLAPEQMRLLPVTDAAQDYCYEV 535
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A1Z5K8X1_FISSO (Threonine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X1_FISSO)

HSP 1 Score: 362 bits (930), Expect = 2.270e-119
Identity = 165/210 (78.57%), Postives = 190/210 (90.48%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+E+EIV VLDLTE ILSRFGFD+Y+IMLST+PEK+VG+D+IWE AT+AL GAL++KGW+Y  ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLP+RF LEY+ + G ++QP+M+HRAIFGS+ERFFGIL+EN +G FPLWLAP Q +LLPVTDA  DYC EV
Sbjct:  373 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVSAEGTREQPIMVHRAIFGSMERFFGILIENCSGDFPLWLAPTQFKLLPVTDAVHDYCNEV 582
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.580e-118
Identity = 166/210 (79.05%), Postives = 189/210 (90.00%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHI+CLP Q++EEIV+VLDLTE ILSRFGFD+Y++MLSTRPEKSVG DEIW+ AT AL+GAL  KGW Y+ ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLP+RF LEY+D+  +KKQP+M+HRAIFGSVERFFGIL+ENT G FPLW+AP Q++LLPVTD   D+C EV
Sbjct:  399 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIYCLPSQLQEEIVAVLDLTEGILSRFGFDQYDVMLSTRPEKSVGGDEIWDAATVALKGALVAKGWDYSVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVDADTKKKQPIMVHRAIFGSVERFFGILIENTEGNFPLWMAPTQLKLLPVTDVVLDFCHEV 608
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S2SSP0_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP0_9STRA)

HSP 1 Score: 359 bits (922), Expect = 2.410e-118
Identity = 165/207 (79.71%), Postives = 187/207 (90.34%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYC 621
            RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+ +EIV VLDLTE ILS+FGF+ YE+MLSTRPEKSVG+DEIW+ AT AL+  LQRKGW+Y  ++GGGAFYGPKID+KIRDAIGRTWQCST+Q DFNLPERF+LEY+ S G++++P+M+HRAIFGSVERFFGILVE+TAG  PLW AP QMRLLPVTD AR YC
Sbjct:  355 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLSDEIVGVLDLTEQILSKFGFNNYEVMLSTRPEKSVGSDEIWDAATAALQDGLQRKGWEYKVDEGGGAFYGPKIDIKIRDAIGRTWQCSTIQCDFNLPERFDLEYVASEGDRQRPIMVHRAIFGSVERFFGILVESTAGDLPLWCAPVQMRLLPVTDEARAYC 561
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BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 358 bits (918), Expect = 2.040e-117
Identity = 163/210 (77.62%), Postives = 187/210 (89.05%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+++EIV VLDLTE ILSRFGFD+Y++MLSTRPEKSVG+DEIW+ AT AL GAL+ KGW Y  ++GGGAFYGPKIDLKIRDAIGR WQCSTVQ DFNLPERF LEY  + G +++P+M+HRAIFGS+ERFFGIL+EN +G FPLWLAP Q++LLPVTDA  +YC E+
Sbjct:  379 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKVKGWDYNVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFGLEYASADGTRERPIMVHRAIFGSIERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVHEYCNEI 588
[Close]
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A6S8UE83_9STRA (Threonine--tRNA ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8UE83_9STRA)

HSP 1 Score: 357 bits (916), Expect = 4.400e-117
Identity = 163/210 (77.62%), Postives = 189/210 (90.00%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            RDLPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP+Q+++EIV VL+L E ILSRFGFD YEIMLST+P+KSVG+D+IWE AT AL GAL+RKGW+Y  +DGGGAFYGPKID+KIRDAIGRTWQCSTVQ DFNLPERF LEY+ + G K++P+M+HRAIFGS+ERFFGILVE+TAG FP WLAP Q++LLPVTDA + +C E+
Sbjct:  381 RDLPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQLQDEIVGVLNLIETILSRFGFDDYEIMLSTQPDKSVGSDDIWESATAALEGALKRKGWEYGIDDGGGAFYGPKIDIKIRDAIGRTWQCSTVQCDFNLPERFGLEYVSAEGVKERPIMVHRAIFGSIERFFGILVESTAGEFPFWLAPTQLKLLPVTDAVKPFCQEI 590
[Close]
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 353 bits (906), Expect = 6.930e-117
Identity = 160/210 (76.19%), Postives = 189/210 (90.00%), Query Frame = 1 
Query:    1 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIVSVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRKGWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYIDSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVTDAARDYCLEV 630
            R+LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+E+E+V VLDLTE+ILSRFGFD YEI LSTRPEKSVG+D+IW+ A  ALRGAL+RKGW +  ++GGGAFYGPKIDLKI+DAIGRTWQCST+Q DFNLPERF+LEY+ +   +++P+M+HRAIFGS+ERFFGILVENTAG FP+WLAP Q++LLPVT+  R +C +V
Sbjct:  275 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFDNYEINLSTRPEKSVGSDDIWDKAETALRGALKRKGWDFAVDEGGGAFYGPKIDLKIKDAIGRTWQCSTIQCDFNLPERFDLEYVSADSSRQRPIMVHRAIFGSIERFFGILVENTAGDFPVWLAPVQLKLLPVTEEFRPFCNQV 484
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6958.14896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBI8_9PHAE1.380e-13288.68Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S1GIN9_CYCTE9.400e-12377.62Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclopho... [more]
A0A7S2S854_9STRA6.310e-12180.48Threonine--tRNA ligase n=1 Tax=Eucampia antarctica... [more]
A0A1E7EYI6_9STRA1.100e-11979.05Threonine--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A1Z5K8X1_FISSO2.270e-11978.57Threonine--tRNA ligase n=2 Tax=Fistulifera solaris... [more]
A0A7S1VGN3_9STRA1.580e-11879.05Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]
A0A7S2SSP0_9STRA2.410e-11879.71Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
B5Y5F7_PHATC2.040e-11777.62Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico... [more]
A0A6S8UE83_9STRA4.400e-11777.62Threonine--tRNA ligase n=1 Tax=Chaetoceros debilis... [more]
A0A7S0D919_9EUKA6.930e-11776.19Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6958contigH-paniculata_contig6958:9249..11600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue2e-96
Seed eggNOG ortholog2850.Phatr33493
KEGG rclassRC00055,RC00523
KEGG koko:K01868
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Threonyl and Alanyl tRNA synthetase second additional domain
EggNOG OGs2XAYQ@2836,COG0441@1,KOG1637@2759
Ec32 ortholog descriptionAminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
Ec32 orthologEc-27_006860.1
EC6.1.1.3
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons4
Model size645
Cds size645
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6958.14896.1prot_H-paniculata_contig6958.14896.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6958 9249..11600 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930835.9700165-CDS-H-paniculata_contig6958:9248..94381622930835.9700165-CDS-H-paniculata_contig6958:9248..9438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 9249..9438 -
1691481474.0499463-CDS-H-paniculata_contig6958:9248..94381691481474.0499463-CDS-H-paniculata_contig6958:9248..9438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 9249..9438 -
1622930835.9871285-CDS-H-paniculata_contig6958:10233..103691622930835.9871285-CDS-H-paniculata_contig6958:10233..10369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 10234..10369 -
1691481474.0676217-CDS-H-paniculata_contig6958:10233..103691691481474.0676217-CDS-H-paniculata_contig6958:10233..10369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 10234..10369 -
1622930836.010206-CDS-H-paniculata_contig6958:10636..107551622930836.010206-CDS-H-paniculata_contig6958:10636..10755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 10637..10755 -
1691481474.0769072-CDS-H-paniculata_contig6958:10636..107551691481474.0769072-CDS-H-paniculata_contig6958:10636..10755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 10637..10755 -
1622930836.0301197-CDS-H-paniculata_contig6958:11400..116001622930836.0301197-CDS-H-paniculata_contig6958:11400..11600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 11401..11600 -
1691481474.0855978-CDS-H-paniculata_contig6958:11400..116001691481474.0855978-CDS-H-paniculata_contig6958:11400..11600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6958 11401..11600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6958.14896.1

>prot_H-paniculata_contig6958.14896.1 ID=prot_H-paniculata_contig6958.14896.1|Name=mRNA_H-paniculata_contig6958.14896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEEEIV
SVLDLTEAILSRFGFDRYEIMLSTRPEKSVGTDEIWELATEALRGALQRK
GWKYTANDGGGAFYGPKIDLKIRDAIGRTWQCSTVQADFNLPERFELEYI
DSAGEKKQPVMLHRAIFGSVERFFGILVENTAGTFPLWLAPEQMRLLPVT
DAARDYCLEVCMRMI
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mRNA from alignment at H-paniculata_contig6958:9249..11600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6958.14896.1 ID=mRNA_H-paniculata_contig6958.14896.1|Name=mRNA_H-paniculata_contig6958.14896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2352bp|location=Sequence derived from alignment at H-paniculata_contig6958:9249..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGACCTGCCGATCAGATGGGCCGAGTTGGGTACCGTCTACCGTTACGA
GCGAAGCGGAACCTTGCATGGACTGATGCGCGTGAGAGGCTTCACGCAAG
ACGATGCGCACATCTTCTGTCTGCCGGAGCAGGTGGAGGAGGAGATTGTT
TCGGTTTTGGACTTGACGGAGGCAATTCTTAGCCGCTTCGGCTTCGACAG
GTACTGTACTGTAGCTATGGATCACCACAATCAGGGAAGCCTGCCCTTTT
TTGTGTTAAATGTGTATCTCCAGAGCTCTTTTCTGGTCAGATATATAAGA
TACCAGAAACCGGAAAAAAACAAACGAATTTTGGATATATTAAGTCAAGA
ATATCTTGAAAAATTATTTATCAAAATAACACGAGTACCATTCAGTAAAC
GTTTCGCAAGTTAAAATTGGCAGGTTAAACCTTGAGTATTGCTGTTGTTT
ACCCGATACTACAGGACACTGAATCCGTTTTCGTTTGTGTGTAATGGTTA
CACAAGGATTACAGCAGGCAACAACTTGTTTTTTTATCGCCATGTTTTGA
TCGGTCGGCAGAAATACTGAGGGTTTGCCTGATCCGTCAGTGACATGAGT
TGTTGGCTCCATATAGGCATTATTATTGTGTCATGTTCCATACGTCATAT
GTACTAGTTCGGCGTGATTAGATACAAGAGTCCAAAATATATTTGCCCAT
AACAAACCGAACACCTTCACTTGCTCTTCCTTGCCTACCATAGATGCATC
AGCGTGTTTACAGTATAACCGCCGCCTGCTGAATGACGTCATGACGTCAA
GCTTCCTTCTTCGATTTTATTTACTCCTGCCATATCGATACATAGGTATG
AGATCATGCTATCAACGCGCCCGGAGAAGTCTGTGGGAACGGATGAGATA
TGGGAGCTGGCCACCGAAGCACTTAGGGGTGCTCTTCAGCGGAAGGGCTG
GAAATATACGGCAAGTCATCACCGTACTTTGCTATACTGTTGCGTTTATT
ATCTAGGGTACTCTAGCACCCCCCGGTAATAACACTCAGCAATATCGATG
TTCTCCGACACTACTCCGTTTGTGATACCGAAAAATGTGTCTACAAGGAT
CTCGTCGAGGTACATGAGTCATTAGATAGTCCGTGTATAAGTACGAACCT
TCATCTTGCGGAAGAAGTCGGACTTGGCTTCATGTGTGATGTGATGCGAT
GCGATGCGATGTGATGTGATGCAACAGGTAGATGATGGGGGAGGGGCGTT
TTATGGACCGAAGATAGACCTGAAGATCCGCGATGCCATCGGCCGCACAT
GGCAGTGCTCCACCGTTCAGGCGGACTTCAACCTGCCGGAAAGGTTCGAG
CTGGAGTATATTGACAGGTAAATTTTGTTTCCCTCTCATGTAGGGCGGGT
TTCTTTTTGGGGGAAGGAGAGGGAAGTAACTCACGTTTTTTCATGCCGTA
GTAGTTACAGTAGTAGTTACATGATTGACCACGCACCCTCGAGAGGACGG
AGCCATTGGCGTGTTTTTTGCGTGGTTGTTTTTTTGGTCCTCGCGTTTCA
TGCCAATATCTATTTTAGGAAATATGTTGAAGTGAAATTTGTTGTTACTC
TTACCGTTTTGTCGCTGCAAGTGCGGTCTCGTGTTCCGCAGCACCTACCG
CAGATGCATGCTTACCCCGGTCACGCGTATGATAGGCCGCTGGAAAAATT
TGTTGGATGTTGTGTGCTACTTATTCCTGGATGTGATGTGTGAGCATTGG
GGGCACTTTCCGCAATCATGGCGGAGCTGTATGTAGACTTTGGGATCTTA
CTAGGAATTGTGCACCGGGACTTGAATGTCTCTGGCGGCGTGCGTCGTTG
ATATGCGCTGCTCCACCGGCCGTTTTTTTCCTATTTCAGAGAGTGTCGGG
GTGTACCGTTTGGTCCGACGGGCGTCCATGTTGGCGGTAGGCTACTGTAT
TTCACGTCGGTCGATCAAGAAAAACTTCAAGGCAAGATGACGCAGTATTG
TAACACTGATCACTTCGAACAGGTTCTGCGTAAAGGCTATCATGTCCACT
TCGGGTACTCGTACGGCACGACTCCGTGGCTCGTGCCTCACCAAAGTACC
CCCTCCTCTCTATCGTTTATGCCTACGTTTGCGATGATACTGCGAAACGG
TCGTCTACCCAGCGCCGGTGAAAAAAAGCAACCCGTGATGCTTCACCGCG
CCATCTTCGGGTCCGTGGAGCGATTTTTTGGCATCTTGGTGGAGAACACG
GCGGGTACCTTTCCGCTCTGGCTGGCGCCGGAGCAGATGCGACTGCTTCC
CGTGACGGATGCGGCAAGGGACTACTGCCTGGAGGTGTGTATGCGTATGA
TA
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Coding sequence (CDS) from alignment at H-paniculata_contig6958:9249..11600-

>mRNA_H-paniculata_contig6958.14896.1 ID=mRNA_H-paniculata_contig6958.14896.1|Name=mRNA_H-paniculata_contig6958.14896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig6958:9249..11600- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGACCTGCCGATCAGATGGGCCGAGTTGGGTACCGTCTACCGTTACGA
GCGAAGCGGAACCTTGCATGGACTGATGCGCGTGAGAGGCTTCACGCAAG
ACGATGCGCACATCTTCTGTCTGCCGGAGCAGGTGGAGGAGGAGATTGTT
TCGGTTTTGGACTTGACGGAGGCAATTCTTAGCCGCTTCGGCTTCGACAG
AGGGACCTGCCGATCAGATGGGCCGAGTTGGGTACCGTCTACCGTTACGA
GCGAAGCGGAACCTTGCATGGACTGATGCGCGTGAGAGGCTTCACGCAAG
ACGATGCGCACATCTTCTGTCTGCCGGAGCAGGTGGAGGAGGAGATTGTT
TCGGTTTTGGACTTGACGGAGGCAATTCTTAGCCGCTTCGGCTTCGACAG
GTATGAGATCATGCTATCAACGCGCCCGGAGAAGTCTGTGGGAACGGATG
AGATATGGGAGCTGGCCACCGAAGCACTTAGGGGTGCTCTTCAGCGGAAG
GGCTGGAAATATACGGCAAGTATGAGATCATGCTATCAACGCGCCCGGAG
AAGTCTGTGGGAACGGATGAGATATGGGAGCTGGCCACCGAAGCACTTAG
GGGTGCTCTTCAGCGGAAGGGCTGGAAATATACGGCAAATGATGGGGGAG
GGGCGTTTTATGGACCGAAGATAGACCTGAAGATCCGCGATGCCATCGGC
CGCACATGGCAGTGCTCCACCGTTCAGGCGGACTTCAACCTGCCGGAAAG
GTTCGAGCTGGAGTATATTGACAGATGATGGGGGAGGGGCGTTTTATGGA
CCGAAGATAGACCTGAAGATCCGCGATGCCATCGGCCGCACATGGCAGTG
CTCCACCGTTCAGGCGGACTTCAACCTGCCGGAAAGGTTCGAGCTGGAGT
ATATTGACAGCGCCGGTGAAAAAAAGCAACCCGTGATGCTTCACCGCGCC
ATCTTCGGGTCCGTGGAGCGATTTTTTGGCATCTTGGTGGAGAACACGGC
GGGTACCTTTCCGCTCTGGCTGGCGCCGGAGCAGATGCGACTGCTTCCCG
TGACGGATGCGGCAAGGGACTACTGCCTGGAGGTGTGTATGCGTATGATA
CGCCGGTGAAAAAAAGCAACCCGTGATGCTTCACCGCGCCATCTTCGGGT
CCGTGGAGCGATTTTTTGGCATCTTGGTGGAGAACACGGCGGGTACCTTT
CCGCTCTGGCTGGCGCCGGAGCAGATGCGACTGCTTCCCGTGACGGATGC
GGCAAGGGACTACTGCCTGGAGGTGTGTATGCGTATGATA
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