prot_H-paniculata_contig6954.14893.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6954.14893.1
Unique Nameprot_H-paniculata_contig6954.14893.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length486
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6954.14893.1 vs. uniprot
Match: A0A6H5KYE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE6_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.260e-13
Identity = 71/201 (35.32%), Postives = 89/201 (44.28%), Query Frame = 0 
Query:  120 LFAAAALDLLMVLHARLPAVF---------------------GIVHDAGTMTPDKESSPAAATVTVTSIARDGSETIVGDDCPFTLGGVXXXXXXGWSCRSAPSGDGKASGSVGRGEARDG---------EGDGGLGAWMVILRALSLGARTGERDVGMHALQLLTKVIVFDDRVEDAPPEILQDVMLSIVLPLATHVWIR 290
            +FA AALDLLMVLHARLP+ F                              +P   S P A +    ++  + S                       SC  +      A+    RG   DG          G     AWM+ILRALSLGA + +  V  HALQLLTKV++ DD   +APP++LQD MLS+VLPLA H W R
Sbjct:    1 MFAGAALDLLMVLHARLPSSFKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVALSKPTATSAAFEAVQEERSTAAA-------------------SCGRSXXXXXAATARADRGARCDGGCRRPQGAAPGLVATDAWMMILRALSLGAGSEDLMVASHALQLLTKVML-DDLAAEAPPDVLQDAMLSVVLPLARHAWRR 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6954.14893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYE6_9PHAE1.260e-1335.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6954contigH-paniculata_contig6954:6903..9618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6954.14893.1mRNA_H-paniculata_contig6954.14893.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6954 6903..9619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6954.14893.1 ID=prot_H-paniculata_contig6954.14893.1|Name=mRNA_H-paniculata_contig6954.14893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=486bp
PRETEWGAVLSVLEACAGSGGAGQAETFEAVCLLVHNQDLKEVLPVDGVT
RCISAFFVAPVGALGAGECDWDGGGEADSDGEAEEGGHFSNSDDEKGIGK
ELLPSSSSSSLTFSSRPVALFAAAALDLLMVLHARLPAVFGIVHDAGTMT
PDKESSPAAATVTVTSIARDGSETIVGDDCPFTLGGVGGVGGIGWSCRSA
PSGDGKASGSVGRGEARDGEGDGGLGAWMVILRALSLGARTGERDVGMHA
LQLLTKVIVFDDRVEDAPPEILQDVMLSIVLPLATHVWIREGEEEAWGLQ
RQHQQRNQRQRQGHNNRGLLEPARGGPSAAVATTCDGHNPANSNALKCSR
TGLRGRTGSNGGSRPPTPGRDESTAGGYGREFSRSNRDGHVDGDGGGGGH
LVQEETLSRTSSRSVATLLPAVALPSPTSSPQEDGFEMVEAPPPAVAEAV
KRRPGKSSSNNHSGVRRVEWESSMAYAGDGSGGAGG
back to top