prot_H-paniculata_contig694.14881.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig694.14881.1
Unique Name	prot_H-paniculata_contig694.14881.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	162

Homology

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: D8LBE9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE9_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 3.850e-63
Identity = 106/162 (65.43%), Postives = 124/162 (76.54%), Query Frame = 0

Query:    1 MGMFSMLVVITLSFLLSIANCFVAPSVSSLSARQTRLTGAGGMNMLFGGGAKKASPGG-IAVKVQQKTGFKETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            M  F  + +I L+ +L I+N FV    SSL+ R+   +G   M MLFG           I VKVQQKTGFKETE+ L+GKTNLRKAL+DNKID+YPLQGKIYNCGGGGSCGTCAVNV  GA N SPKGPGEKKLLDK+K+PAS+RLSCCTMV+GPVT++TKP
Sbjct:    1 MKSFLFVALIVLAAVLQISNGFVVAPSSSLNVRRQSHSG---MQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: A0A836CNT2_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 8.280e-40
Identity = 80/150 (53.33%), Postives = 94/150 (62.67%), Query Frame = 0

Query:   12 LSFLLSIANCFVAPSVSSLSARQTRLTGAGGMNMLFGGGAKKASPGGIAVKVQQKTGFKETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            LS +L+     VAP++     R T         MLFG  A  A   GI V VQQK  FK+T + +    NLRKAL+   I++YPLQGKIYNCGGGGSCGTC VNVV G  N SPKGP EKKLL    KP ++RLSCCT V G +T+ TKP
Sbjct:   14 LSVMLAAEAFLVAPALQRPVQRDTLTP-----RMLFGKKAAPAKSKGIEVTVQQKY-FKDTVVAMEQPGNLRKALMGAGIEIYPLQGKIYNCGGGGSCGTCTVNVVAGGNNCSPKGPAEKKLLGN--KPETYRLSCCTKVNGNITVATKP 155

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: A0A7S2UXM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.150e-37
Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 0

Query:    8 VVITLSFLLSIANCFVAPSVSSLSARQTRLTGAGGMNMLFGGGAKKASP--GGIAVKVQQKTGFKETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            VVI L   +S A+ F+     SL+  + + + +  + MLFG   KKA+P  G  ++ V+Q+ GF + ++   G  NLRK L+  KID+YPLQGK+ NCGGGG CGTCAV V+ GA NLSPK P EKK+L K  KP ++RLSCCT V+G  T++TKP
Sbjct:    5 VVIFLVCAISGASAFLG---QSLALNRVQASSSTSLQMLFGS-KKKAAPVKGKYSITVKQR-GFTDFDLETEGTANLRKTLMAQKIDIYPLQGKLTNCGGGGVCGTCAVEVMDGANNLSPKAPNEKKVLSK--KPENYRLSCCTRVSGACTVRTKP 153

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: W7TM71_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM71_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.880e-31
Identity = 70/135 (51.85%), Postives = 84/135 (62.22%), Query Frame = 0

Query:   33 RQTRLTGAGGMNMLFG----GGAKKASPGGIAVKVQQKTGFK--ETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            +Q+R  G   M  +FG    GG KK       V VQQK  +K  E E+      NLRK L+ NKID+YPLQGKIYNCGGGG CGTCA+ ++ GA NL+PK P E K L   KK    RL+CCT  +G VT+KTKP
Sbjct:   30 KQSRRVGVMTMLGMFGKKSAGGNKKT----FTVTVQQKF-YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALG-GKKGDDIRLACCTRASGDVTVKTKP 158

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: M1VFK1_CYAM1 (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VFK1_CYAM1)

HSP 1 Score: 106 bits (265), Expect = 5.950e-26
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 0

Query:   80 TNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            +NLRK LL+NKIDVY L+GK+ NCGGGG CGTC V++  G  N +P+G  E ++ +  + P S+RLSCCT + GP+T++TKP
Sbjct:  109 SNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: UPI00055BF685 ((2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055BF685)

HSP 1 Score: 98.6 bits (244), Expect = 8.070e-24
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0

Query:   72 TEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            TE++ +  +NLR+  L N +D+Y L+GK+ NCGG G C TC V++V G  NLSP+   E+K L K  KP S+RLSC T+V GP+T++TKP
Sbjct:   17 TEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRLGK--KPDSYRLSCQTVVKGPITVRTKP 104

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: A0A0V7ZXI1_9CYAN (Iron ABC transporter substrate-binding protein n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZXI1_9CYAN)

HSP 1 Score: 94.4 bits (233), Expect = 3.110e-22
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 0

Query:   71 ETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            + E++ +   NLR   ++N +D+Y + GK+ NCGG G CGTCAV +V G  NLSP+   E KLL K  KP ++RL+C T+V GPV + TKP
Sbjct:   10 DKEVVAATGANLRLKAMENSVDIYKMWGKMMNCGGYGQCGTCAVEIVSGMENLSPRTDAENKLLKK--KPDNYRLACQTLVNGPVEVITKP 98

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: A0A835YVE2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.840e-22
Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 0

Query:   51 AKKASPGGIAVKVQQKTGFKETEIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            +K A+  G++V V Q +   + +I      NLRK LLDNK+D+Y    K+  CGGGG+CGTC V V  G  N S KG GE+K+L      A  RL+CCT VTGPV++  KP
Sbjct:   11 SKAAASKGVSVTVSQGSKVLK-QIDSDAPVNLRKLLLDNKVDLYKPLDKLKQCGGGGTCGTCRVRVTEGMENCSKKGLGEEKMLKAVG--ADIRLACCTRVTGPVSVTVKP 118

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: A0A3M1PIL1_9CYAN ((2Fe-2S)-binding protein n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1PIL1_9CYAN)

HSP 1 Score: 95.9 bits (237), Expect = 4.660e-22
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 0

Query:   73 EIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            E++ +   NLR   L+N ID+Y   GK+ NCGG G CGTC V VV GA NLSP+ P E++ L K  +PA++RL+C TMV GPV++ TKP
Sbjct:   12 EVVAADGANLRFKALENGIDLYTFMGKMMNCGGYGQCGTCIVEVVEGAENLSPRTPVEQQKLKK--RPANYRLACQTMVNGPVSVVTKP 98

[Close]

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Match: UPI0016855296 ((2Fe-2S)-binding protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016855296)

HSP 1 Score: 92.8 bits (229), Expect = 1.320e-21
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0

Query:   73 EIILSGKTNLRKALLDNKIDVYPLQGKIYNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTMVTGPVTIKTKP 161
            E+I++   NLR+  L N ID+Y   GK+ NCGG G CGTC V +V GA NLS +   E++ L K  KP ++RL+C T+V GP+ +KTKP
Sbjct:   12 EVIVAAGANLREKALQNDIDIYTFMGKMTNCGGYGQCGTCIVEIVEGAENLSERTEFEQRKLKK--KPETYRLACQTLVNGPIAVKTKP 98

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig694.14881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBE9_ECTSI	3.850e-63	65.43	Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A836CNT2_9STRA	8.280e-40	53.33	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A7S2UXM9_9STRA	4.150e-37	49.36	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
W7TM71_9STRA	1.880e-31	51.85	Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 Re...	[more]
M1VFK1_CYAM1	5.950e-26	54.88	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
UPI00055BF685	8.070e-24	51.11	(2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. G...	[more]
A0A0V7ZXI1_9CYAN	3.110e-22	48.35	Iron ABC transporter substrate-binding protein n=1...	[more]
A0A835YVE2_9STRA	3.840e-22	46.85	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A3M1PIL1_9CYAN	4.660e-22	52.81	(2Fe-2S)-binding protein n=1 Tax=Cyanobacteria bac...	[more]
UPI0016855296	1.320e-21	49.44	(2Fe-2S)-binding protein n=1 Tax=Oscillatoria sp. ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 101..152 e-value: 1.4E-8 score: 34.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 59..161 score: 8.749
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 58..161 e-value: 1.9E-16 score: 61.8
None	No IPR available	PANTHER	PTHR23426	FERREDOXIN/ADRENODOXIN	coord: 69..161
None	No IPR available	PANTHER	PTHR23426:SF49		coord: 69..161
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..161
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.891
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 72..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig694	contig	H-paniculata_contig694:18912..20019 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig694.14881.1	mRNA_H-paniculata_contig694.14881.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig694 18912..20019 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig694.14881.1 ID=prot_H-paniculata_contig694.14881.1|Name=mRNA_H-paniculata_contig694.14881.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MGMFSMLVVITLSFLLSIANCFVAPSVSSLSARQTRLTGAGGMNMLFGGG
AKKASPGGIAVKVQQKTGFKETEIILSGKTNLRKALLDNKIDVYPLQGKI
YNCGGGGSCGTCAVNVVVGAGNLSPKGPGEKKLLDKDKKPASFRLSCCTM
VTGPVTIKTKP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf