prot_H-paniculata_contig6923.14859.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6923.14859.1
Unique Nameprot_H-paniculata_contig6923.14859.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
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BLAST of mRNA_H-paniculata_contig6923.14859.1 vs. uniprot
Match: D7G1F4_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 7.020e-30
Identity = 67/117 (57.26%), Postives = 83/117 (70.94%), Query Frame = 0 
Query:   14 GGGEEKKGVEWVEPAREPTELEAKQLKDLLKRANNVPLRLDPRERLILGLLEGALHHVPYTDEVDRIHSGNKMSHVLRNLKIFFMSLWGMYKAAGVTPPTRVAPPGNHPANRVQNNH 130
            GGG    G E   PARE T+ E + L DL +R+ N+PLRLDPRER ILG+LEG+LHHV YTD+VDRI  GN++ +VL+NL  FF S+WGMYKA+GV+ PT   P G   A R+Q  H
Sbjct:  423 GGGVSAGGDEAAGPAREATKSEKESLVDLYRRSTNIPLRLDPREREILGVLEGSLHHVQYTDQVDRIMRGNRLPYVLKNLGHFFTSVWGMYKASGVSLPTYSPPSGA--AKRLQPRH 537
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BLAST of mRNA_H-paniculata_contig6923.14859.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.400e-28
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:   21 GVEWVEPAREPTELEAKQLKDLLKRANNVPLRLDPRERLILGLLEGALHHVPYTDEVDRIHSGNKMSHVLRNLKIFFMSLWGMYKAAGVTPPTRVAPPG 119
            G E V PARE T+ E + L DL +R+ N+PLRLDPRER ILG+LEG+LHHV YTDEVDRI  G ++ +VL+NL  FF S+WGMYKA+GV+ PT   P G
Sbjct:  632 GDEAVGPAREATKSEKESLVDLYRRSTNIPLRLDPREREILGVLEGSLHHVQYTDEVDRIMRGGRLPYVLKNLGHFFTSVWGMYKASGVSLPTYSPPSG 730
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6923.14859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F4_ECTSI7.020e-3057.26B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KSQ1_9PHAE1.400e-2861.62B box-type domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018553Protein of unknown function DUF2009PFAMPF09418DUF2009coord: 45..109
e-value: 5.2E-9
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6923contigH-paniculata_contig6923:7339..11908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6923.14859.1mRNA_H-paniculata_contig6923.14859.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6923 7339..11909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6923.14859.1 ID=prot_H-paniculata_contig6923.14859.1|Name=mRNA_H-paniculata_contig6923.14859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
GAARGGSVAAAYKGGGEEKKGVEWVEPAREPTELEAKQLKDLLKRANNVP
LRLDPRERLILGLLEGALHHVPYTDEVDRIHSGNKMSHVLRNLKIFFMSL
WGMYKAAGVTPPTRVAPPGNHPANRVQNNHHRFGPVPYRALANNNGLAMQ
NG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018553DUF2009