prot_H-paniculata_contig69209.14854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig69209.14854.1
Unique Name	prot_H-paniculata_contig69209.14854.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	164

Homology

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 2.040e-55
Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGAS-----DLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            LWIP    ALQ RLMVCAHM+EAGHRG  AT+ RL+ YC W  +E +V  FV+QCLHC+D ++G +VPRPLGE +HGT  GE++HFD+L++GAS     D L E E    G  Y+LV++DD+S +VW EP   CTA + A  +L WC + G P V+VSDTA HFKN ++
Sbjct: 1283 LWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEE----GFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMM 1447

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.890e-53
Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRG-GCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            LWIP     +Q RLM+CAHM+EAGHRG+ AT++RL  YC W  ++ +V  FV+QCLHC+D +SG  VPRP GE +HG   GE+LHFD+LH+G S  L    +    G  YLLV++DD+S + W EP   CTA++ A  +L WC   G P V+VSDTA HFKN ++
Sbjct:  405 LWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVM 569

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.850e-52
Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRG-GCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            LWIP     +Q RLM+CAHM+EAGHRG+ AT++RL  YC W  ++ +V  FV+QCLHC+D +SG  VPRP GE +HG   GE+LHFD+LH+G S  L    +    G  YLLV++DD+S + W EP   CTA++ A  +L WC   G P V+VSDTA HFKN ++
Sbjct: 1181 LWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVM 1345

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.750e-34
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 0

Query:   44 IEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRG-GCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            ++ +V  FV+QCLHC+D +SG  VPRP GE +HG   GE+LHFD+LH+G S  L    +    G  YLLV++DD+S + W EP   CTA++ A  +L WC   G P V+VSDTA HFKN ++
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVM 122

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6H5J9M0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9M0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.860e-32
Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 0

Query:   44 IEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLL-KEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTA 156
            +E +V  FV+ CL+C+D ++G +VP+PLGE  HGT  GE++ FD+L++GAS LL K+      G  Y+LV++DD+S +VW EP   CTA++ +  +L WC   G P V+VSDTA
Sbjct:    1 MEEHVTDFVKHCLNCMDSKAGEKVPQPLGETAHGTRPGEVVLFDYLYVGASGLLGKDSLDEEDGFKYILVMMDDMSNWVWLEPTGACTARLTSQHLLTWCKTLGVPEVWVSDTA 114

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A329S5W2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5W2_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.110e-29
Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            +WIP    +LQ R+ +  H+  AGHRG++ T+  L     W+ + A+   FVR CLHC+    G  VPRPLGE +H     E++H+D+L++GAS    +         Y+LV+  D S +VW     + TA      ++ W  VFG    +VSD   HFKN ++
Sbjct:  374 VWIPPAAASLQLRICIVGHVSVAGHRGLETTLAALQQRFWWNDLPADATYFVRHCLHCMSVVGGPPVPRPLGEAMHADRPNELIHWDYLYMGASSTNDK---------YILVIKGDASKFVWFFAVPDATADTTYNCLMEWFAVFGVCLTWVSDQGTHFKNEVI 528

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A2P4WY00_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WY00_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.470e-29
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            +WIP    +LQ R+ +  H   AGHRG+D T+  ++    W  +  +V  FVR+CLHC+    G  +PRPLGE +H     E++H+D+L++GAS              Y+LV+ DD S YVW     + TA      ++ W   FG    + SD   HFKN ++
Sbjct: 1279 IWIPAEAGSLQLRICIVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLYMGAS---------TSDDMYILVIKDDASKYVWFFAVPDATADTTYTCLVEWFAAFGVCLSWDSDQGTHFKNEVI 1433

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.420e-29
Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 0

Query:    1 LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            +WIP +   +Q R+ V AH   AGHR ++AT   +A    W  ++A+V  FVR CLHC+    G  VPRP GE LH T+  E++HFD++    ++         GG  ++LV+ DD+SG+V    +   TA   A+ ++ W  +FG    +VSD   HFKN L+
Sbjct:  866 IWIPDDALDMQVRICVVAHAGVAGHRRVEATTASVADMFDWPTLKADVKNFVRACLHCMVV-DGESVPRPWGEALHATKPNELIHFDWVSFPEAE---------GGLKHVLVIKDDMSGFVRLHASASATAVETASALMEWFGLFGVVKTWVSDCGSHFKNELI 1019

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BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6A3N928_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N928_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.860e-28
Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 0

Query:    3 IPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            IP    +LQ R+ +  H   AGHRG+D T+  ++    W  +  +V  FVR+CLHC+    G  +PRPLGE +H     E++H+D+L +GAS              Y+LV+ DD S YVW     + TA  +   ++ W   FG    +VSD   HFKN ++
Sbjct:  612 IPAEAGSLQLRICIVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLFMGAS---------TSDDKYILVIKDDASKYVWFFVVPDATADTSYTCLMYWFAAFGVSLSWVSDQGTHFKNEVI 764

[Close]

BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Match: A0A6A4FJL8_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FJL8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.160e-28
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 0

Query:    3 IPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAGFVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEHEVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGVFVSDTARHFKNRLV 164
            IP    +LQ R+ +  H   AGHRG+D T+  ++    W  +  +V  FVR+CLHC+    G  +PRPLGE +H     E++H+D+L +GAS              Y+LV+ DD S YVW     + TA      ++ W   FG    +VSD   HFKN ++
Sbjct:  334 IPAEAGSLQLRICIVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLFMGAS---------TSDDKYILVIKDDASKYVWFFVVPDATADTTYTCLMYWFAAFGVSLSWVSDQGTHFKNEVI 486

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig69209.14854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K5A5_9PHAE	2.040e-55	54.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCX8_9PHAE	2.890e-53	51.52	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L7F6_9PHAE	1.850e-52	51.52	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVS6_9PHAE	4.750e-34	49.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J9M0_9PHAE	2.860e-32	47.37	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A329S5W2_9STRA	1.110e-29	35.98	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A2P4WY00_9STRA	3.470e-29	35.37	Uncharacterized protein n=1 Tax=Phytophthora palmi...	[more]
A0A6A4ZJ35_9STRA	8.420e-29	37.80	Uncharacterized protein (Fragment) n=3 Tax=Aphanom...	[more]
A0A6A3N928_9STRA	2.860e-28	35.80	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6A4FJL8_9STRA	3.160e-28	35.80	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 8..59 e-value: 4.0E-10 score: 39.7
None	No IPR available	GENE3D	1.10.340.70		coord: 2..62 e-value: 1.1E-7 score: 33.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 79..164 e-value: 7.7E-8 score: 33.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 66..164 score: 10.029
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 74..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig69209	contig	H-paniculata_contig69209:3..494 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig69209.14854.1	mRNA_H-paniculata_contig69209.14854.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig69209 3..494 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig69209.14854.1 ID=prot_H-paniculata_contig69209.14854.1|Name=mRNA_H-paniculata_contig69209.14854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
LWIPRNEHALQARLMVCAHMQEAGHRGMDATVNRLAAYCVWDGIEANVAG
FVRQCLHCLDFRSGSRVPRPLGELLHGTEVGEILHFDFLHLGASDLLKEH
EVIRGGCPYLLVLLDDVSGYVWPEPALECTAKVAAATMLRWCMVFGAPGV
FVSDTARHFKNRLV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041588	Integrase_H2C2
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf