prot_H-paniculata_contig68869.14810.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig68869.14810.1
Unique Name	prot_H-paniculata_contig68869.14810.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	92

Homology

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.520e-25
Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            MGPI+  ALGG +YV+K+ DE TKW ET+L+K++ D + A Q F QS+V+P+ FR++ LR DKG E   + F++YCLQ G  LEYA  NTP
Sbjct:    1 MGPISLPALGGFRYVNKLVDEKTKWKETFLMKTKRDAIKALQLFNQSLVVPTRFRLDCLRGDKGTECTCREFREYCLQIGAKLEYASTNTP 91

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.740e-21
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GP TP ALGG KY +K  D+HTKW E  L+K +  ++ A + F +  VIP   RI  LRADKG E+ +  ++ YCL  G+ L++A  NTP
Sbjct:  641 LGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTP 731

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.760e-21
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GP TP ALGG KY +K  D+HTKW E  L+K +  ++ A + F +  VIP   RI  LRADKG E+ +  ++ YCL  G+ L++A  NTP
Sbjct:  763 LGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTP 853

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.760e-21
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GP TP ALGG KY +K  D+HTKW E  L+K +  ++ A + F +  VIP   RI  LRADKG E+ +  ++ YCL  G+ L++A  NTP
Sbjct:  641 LGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTP 731

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 3.120e-21
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GPI+P A GG  YVSK +DE+++    YL++S+ + ++    F+Q +VIP+GFR+ERLR+D GGEY  + ++D+C   G+  E+    TP
Sbjct:   54 LGPISPPAKGGYNYVSKFTDEYSRMNIVYLIRSKDEAINTLDRFIQDIVIPNGFRLERLRSDNGGEYTSEYYRDFCKTIGIVQEFTAPATP 144

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5KFB1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB1_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 6.570e-21
Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GPI+P A GG  YVSK +DE+++    YL++S+ + ++    F+Q +VIP+GFR+ERLR D GGEY  + ++D+C   G+  E+    TP
Sbjct:   40 LGPISPPAKGGYNYVSKFTDEYSRMNIVYLIRSKDEAINTLDRFIQDIVIPNGFRLERLRNDNGGEYSSEYYRDFCKTIGIVQEFTVPATP 130

[Close]

BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.640e-18
Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 0

Query:    1 MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            +GPI+P A GG  YVSK +DE+++    YL++++ + +   + F+  +VIP+GFR+ERLR+D GGEY  + +  +C   G+  E+    TP
Sbjct:  536 LGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYTAEYYTKFCKTIGIVQEFTAPATP 626

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A6H5JFQ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.270e-16
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0

Query:    1 MGPITPEAL---GGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            MGP+ P A    G   Y  KI+D+HTK  E YLL+ + D+  A  ++   V    G+R E +R DK GE     F+DYC  + + LEYA  NTP
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDHTKMKEVYLLRKKSDSTEAVHTYNMCVAAARGYRTETIRCDKEGENTGSEFRDYCKNSALKLEYAATNTP 203

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A4S4K8M5_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K8M5_9APHY)

HSP 1 Score: 73.9 bits (180), Expect = 2.210e-13
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 0

Query:    2 GPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            GP   E LGG KY    +D+H++WT TYL++++ +    +QSFV  +    G  ++ L +D+GGEY+   F  Y  + GM       +TP
Sbjct:  601 GPAPVETLGGRKYYVSFTDDHSRWTVTYLMRTKDEVFRHYQSFVALMKAHHGVAVKLLHSDRGGEYLSNEFNTYLSEQGMKRRLTVHDTP 690

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BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 71.6 bits (174), Expect = 1.480e-12
Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 0

Query:    2 GPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVIPSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP 91
            GP   E LGG KY    +D+H++WT TYL++++ +    +QSFV  +       ++ L +D+GGEY+   F  Y  + GM       +TP
Sbjct:  601 GPAPVETLGGRKYYVSFTDDHSRWTVTYLMRTKDEVFRHYQSFVALMKAHHSVAVKLLHSDRGGEYLSNEFNTYLSEQGMKRRLTVHDTP 690

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig68869.14810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L6R7_9PHAE	1.520e-25	53.85	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KJN3_9PHAE	1.740e-21	46.15	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KJH6_9PHAE	1.760e-21	46.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J842_9PHAE	1.760e-21	46.15	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KCZ9_9PHAE	3.120e-21	42.86	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KFB1_9PHAE	6.570e-21	42.86	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KY84_9PHAE	1.640e-18	39.56	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JFQ6_9PHAE	1.270e-16	41.49	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A4S4K8M5_9APHY	2.210e-13	35.56	Uncharacterized protein (Fragment) n=1 Tax=Hermans...	[more]
A0A2R6PCF8_9APHY	1.480e-12	34.44	Uncharacterized protein n=1 Tax=Hermanssonia centr...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..91 e-value: 8.6E-9 score: 37.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig68869	contig	H-paniculata_contig68869:347..622 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig68869.14810.1	mRNA_H-paniculata_contig68869.14810.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig68869 242..730 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig68869.14810.1 ID=prot_H-paniculata_contig68869.14810.1|Name=mRNA_H-paniculata_contig68869.14810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MGPITPEALGGLKYVSKISDEHTKWTETYLLKSQGDTLSAFQSFVQSVVI
PSGFRIERLRADKGGEYIDKGFKDYCLQTGMPLEYAHANTP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf