prot_H-paniculata_contig68371.14761.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig68371.14761.1
Unique Name	prot_H-paniculata_contig68371.14761.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	89

Homology

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: D1J792_ECTSI (ATP synthase subunit a, chloroplastic n=40 Tax=Phaeophyceae TaxID=2870 RepID=D1J792_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.180e-48
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:  160 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 247

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A8F0F721_9PHAE (ATP synthase CF0 A subunit subunit IV n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F721_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.960e-47
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGN+LADELTVSVL LLVPLIVPLPVM+LGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:  161 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTLLVPLIVPLPVMVLGVFASSVQALIFSTLAGAYIAEAVEGH 248

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A8E6D5Q8_9PHAE (ATP synthase subunit a, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5Q8_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.780e-47
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLI+PLPVMLLGVFASSVQALIFSTLAGAYIAEAVE H
Sbjct:  161 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIIPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEEH 248

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A141BSD6_9PHAE (ATP synthase subunit a, chloroplastic n=14 Tax=Fucales TaxID=3009 RepID=A0A141BSD6_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 9.020e-46
Identity = 80/88 (90.91%), Postives = 86/88 (97.73%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVL +LVPL +PLPVMLLGVFASSVQALIFSTLAGAYIAE++EGH
Sbjct:  161 GYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTVLVPLFIPLPVMLLGVFASSVQALIFSTLAGAYIAESIEGH 248

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A6P0NHI3_9CYAN (F0F1 ATP synthase subunit A (Fragment) n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NHI3_9CYAN)

HSP 1 Score: 149 bits (375), Expect = 3.280e-44
Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTPLLLPIN+LEDFTKPLSLSFRLFGNILADELTVSVL LLVPL+ PLPVM LGVFASSVQALIFSTLA AYI E++EG 
Sbjct:   45 GYFKRYIEPTPLLLPINVLEDFTKPLSLSFRLFGNILADELTVSVLVLLVPLVAPLPVMALGVFASSVQALIFSTLAAAYIGESIEGE 132

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: UPI001FCDC1CA (ATP synthase CFO A subunit subunit IV n=2 Tax=Rhodophyta TaxID=2763 RepID=UPI001FCDC1CA)

HSP 1 Score: 150 bits (379), Expect = 9.190e-44
Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYF RYIEPTP+LLPINILEDFTKPLSLSFRLFGNILADEL VSVLALLVPLIVPLPVM+LGVFASS+QALIFSTL+ AYI EA+EGH
Sbjct:  151 GYFARYIEPTPILLPINILEDFTKPLSLSFRLFGNILADELVVSVLALLVPLIVPLPVMVLGVFASSIQALIFSTLSAAYIGEAMEGH 238

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: B2XT85_HETAK (ATP synthase subunit a, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT85_HETAK)

HSP 1 Score: 150 bits (378), Expect = 1.410e-43
Identity = 76/88 (86.36%), Postives = 84/88 (95.45%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRY+EPTP+LLPINILEDFTKPLSLSFRLFGNILADELTVSVL +LVPL +PLP+M+LGVFASS+QALIFSTLA AYI EA+EGH
Sbjct:  155 GYFKRYLEPTPVLLPINILEDFTKPLSLSFRLFGNILADELTVSVLVMLVPLFIPLPIMVLGVFASSIQALIFSTLAAAYIGEALEGH 242

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: UPI001FCDDA55 (ATP synthase CFO A subunit subunit IV n=1 Tax=Goniotrichopsis reniformis TaxID=468933 RepID=UPI001FCDDA55)

HSP 1 Score: 149 bits (376), Expect = 2.760e-43
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYF RYIEP P+LLPINILEDFTKPLSLSFRLFGNILADEL VSVLALLVPLIVPLPVM+LGVFASS+QALIFSTLA AYI EA+EGH
Sbjct:  152 GYFARYIEPVPVLLPINILEDFTKPLSLSFRLFGNILADELVVSVLALLVPLIVPLPVMVLGVFASSIQALIFSTLAAAYIGEAMEGH 239

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A7U0KT16_OLILU (ATP synthase CF0 subunit IV n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KT16_OLILU)

HSP 1 Score: 149 bits (376), Expect = 3.080e-43
Identity = 75/88 (85.23%), Postives = 84/88 (95.45%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVL +LVPL +PLP+M+LG+FASS+QALIFSTLA +YIAEAVE H
Sbjct:  158 GYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTMLVPLFIPLPIMVLGIFASSIQALIFSTLAASYIAEAVEDH 245

[Close]

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Match: A0A1C9CCU5_9RHOD (ATP synthase CF0 subunit A n=5 Tax=Stylonemataceae TaxID=446133 RepID=A0A1C9CCU5_9RHOD)

HSP 1 Score: 149 bits (376), Expect = 3.340e-43
Identity = 78/88 (88.64%), Postives = 84/88 (95.45%), Query Frame = 0

Query:    1 GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 88
            GYF RYIEPTP+LLPINILEDFTKPLSLSFRLFGNILADEL V+VLALLVPLIVPLPVM+LGVFASS+QALIFSTL+ AYI EA+EGH
Sbjct:  160 GYFARYIEPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLALLVPLIVPLPVMVLGVFASSIQALIFSTLSAAYIGEAMEGH 247

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig68371.14761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J792_ECTSI	1.180e-48	100.00	ATP synthase subunit a, chloroplastic n=40 Tax=Pha...	[more]
A0A8F0F721_9PHAE	1.960e-47	96.59	ATP synthase CF0 A subunit subunit IV n=1 Tax=Prot...	[more]
A0A8E6D5Q8_9PHAE	2.780e-47	97.73	ATP synthase subunit a, chloroplastic n=1 Tax=Ishi...	[more]
A0A141BSD6_9PHAE	9.020e-46	90.91	ATP synthase subunit a, chloroplastic n=14 Tax=Fuc...	[more]
A0A6P0NHI3_9CYAN	3.280e-44	88.64	F0F1 ATP synthase subunit A (Fragment) n=1 Tax=Moo...	[more]
UPI001FCDC1CA	9.190e-44	89.77	ATP synthase CFO A subunit subunit IV n=2 Tax=Rhod...	[more]
B2XT85_HETAK	1.410e-43	86.36	ATP synthase subunit a, chloroplastic n=2 Tax=Hete...	[more]
UPI001FCDDA55	2.760e-43	89.77	ATP synthase CFO A subunit subunit IV n=1 Tax=Goni...	[more]
A0A7U0KT16_OLILU	3.080e-43	85.23	ATP synthase CF0 subunit IV n=1 Tax=Olisthodiscus ...	[more]
A0A1C9CCU5_9RHOD	3.340e-43	88.64	ATP synthase CF0 subunit A n=5 Tax=Stylonemataceae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATP synthase, F0 complex, subunit A	PRINTS	PR00123	ATPASEA	coord: 8..23 score: 28.67 coord: 68..83 score: 38.03 coord: 24..46 score: 43.14
IPR000568	ATP synthase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 1..81 e-value: 2.6E-20 score: 73.3
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220		coord: 1..88 e-value: 5.3E-24 score: 87.3
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 1..81
None	No IPR available	PANTHER	PTHR42823	FAMILY NOT NAMED	coord: 1..88
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 55..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..82
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 83..88
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..54
None	No IPR available	TMHMM	TMhelix		coord: 43..65
IPR023011	ATP synthase, F0 complex, subunit A, active site	PROSITE	PS00449	ATPASE_A	coord: 27..36

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig68371	contig	H-paniculata_contig68371:1..267 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig68371.14761.1	mRNA_H-paniculata_contig68371.14761.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig68371 1..267 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig68371.14761.1 ID=prot_H-paniculata_contig68371.14761.1|Name=mRNA_H-paniculata_contig68371.14761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLV
PLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000568	ATP_synth_F0_asu
IPR035908	F0_ATP_A_sf
IPR023011	ATP_synth_F0_asu_AS