prot_H-paniculata_contig68214.14743.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig68214.14743.1
Unique Nameprot_H-paniculata_contig68214.14743.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5KG67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG67_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.030e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+R  +G EV +L
Sbjct:   55 MRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRFVEGGEVVLL 119          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5KL18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL18_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.800e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR   G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+RL +G +V +L
Sbjct:  411 MRLPDGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRLVEGGDVVLL 475          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5L6N9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N9_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.800e-11
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDE 61
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +ADPCV+R  +G E
Sbjct:  659 MRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADPCVFRFVEGGE 719          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5KKT4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT4_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.810e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+ L +G EV +L
Sbjct:  523 MRLPEGCGALSGKIVQLNKSLYDLRQASREWYALLKKCLLALGFEQCMADSCVFHLVEGGEVVLL 587          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5K7Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y0_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.840e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+ L +G EV +L
Sbjct: 1544 MRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFHLVEGGEVVLL 1608          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5KEU9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.160e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+R  +G EV +L
Sbjct:  230 MRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRSVEGGEVVLL 294          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.210e-11
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD C++R  +G EV +L
Sbjct:  234 MRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLL 298          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5KJF9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 8.890e-11
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  QG G  SG IV+L K+LY LRQ+SR+    L R L A GFEQ +AD CV+RL +G  V ++
Sbjct:   33 MRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLI 97          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.170e-11
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +G G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+RL +  EV ++
Sbjct:    1 MRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRLVEDGEVVLI 65          
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Match: A0A6H5JBR0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR0_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.570e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLADPCVYRLTDGDEVAVL 65
            MR  +  G  SG IV+L K+LY LRQ+SRE +  L + L A GFEQ +AD CV+RL +G EV +L
Sbjct:  158 MRLPEVCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRLVEGGEVVLL 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig68214.14743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG67_9PHAE2.030e-1152.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL18_9PHAE2.800e-1152.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6N9_9PHAE2.800e-1154.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKT4_9PHAE2.810e-1152.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K7Y0_9PHAE2.840e-1152.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEU9_9PHAE3.160e-1152.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K307_9PHAE5.210e-1150.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJF9_9PHAE8.890e-1152.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE9.170e-1150.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBR0_9PHAE9.570e-1152.31Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig68214contigH-paniculata_contig68214:549..743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig68214.14743.1mRNA_H-paniculata_contig68214.14743.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig68214 216..743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig68214.14743.1 ID=prot_H-paniculata_contig68214.14743.1|Name=mRNA_H-paniculata_contig68214.14743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
MRFSQGLGKRSGTIVRLCKNLYSLRQSSRESFTNLARTLGAYGFEQSLAD
PCVYRLTDGDEVAVL
back to top