prot_H-paniculata_contig6801.14720.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6801.14720.1
Unique Name	prot_H-paniculata_contig6801.14720.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	285

Homology

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: D8LR87_ECTSI (Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR87_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 2.650e-84
Identity = 127/214 (59.35%), Postives = 162/214 (75.70%), Query Frame = 0

Query:   73 SAQDTFESYQGGDYTVFVGRGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAAL--APYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGASGDYMYDLAKVHIVVRDW 284
            +  + FE+Y GGDY +FVGRGM RFR G V  S++D+DRA+ LQPRL  YMWQRG+SLYYADRFEEG++QFRKDV +NP+D EEAIW FMCE+RI  +GF  A+++++    +RRPYMRAAY+LF G++ E +LA+QM+        GS G+  AA   APYFYANLYLGL++EAKGD  LAR+YI+AA +S Y  SGDYM D+A+VH   R W
Sbjct:    3 TTHEDFETYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADRFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQME--------GSLGSNGAAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSGDYMCDVARVHQQARGW 208

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: A0A6H5L4Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y5_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 3.510e-84
Identity = 124/212 (58.49%), Postives = 160/212 (75.47%), Query Frame = 0

Query:   73 SAQDTFESYQGGDYTVFVGRGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGASGDYMYDLAKVHIVVRDW 284
            +  + FE+Y GGDY +FVGRGM RFR G V  S++D+DRA+ LQPRL  YMWQRG+SLYYAD+FEEG++QFRKDV +NP+D EEAIW FMCE+RI  +GF  A+++++    +RRPYMRAAY+LF G++ E +LA+QM++      V  SG      APYFY NLYLGL++EAKGD  LAR+YI+AA +S Y  SGDYM D+A+VH  VR W
Sbjct:   64 TTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQMEVSLGSNGVAGSG------APYFYVNLYLGLYSEAKGDDVLARKYISAAVRSPYAKSGDYMCDVARVHQQVRGW 269

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: A0A835ZJI4_9STRA (Binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI4_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.220e-66
Identity = 113/206 (54.85%), Postives = 141/206 (68.45%), Query Frame = 0

Query:   79 ESYQGGDYTVFVGRGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGASGDYMYDLAKVHIVVRDW 284
            E+Y G +  V++ RGM RFR+ +V+ESI+D+DRAL L P L PY+WQRGLSLYYADRF EGA QFR DV VNP+D EEAIWAF CEAR   +GF  AR+++L  G D RPYMR AY+LF G + E +LA           VG + ++      +FYANLYLGL+AE + + +LAR YI  A  S Y A+GDYM  LA+VH  VR W
Sbjct:   13 ETYTGSNPKVYIVRGMERFRKAKVQESISDFDRALQLSPALGPYLWQRGLSLYYADRFAEGAAQFRLDVSVNPNDTEEAIWAFACEART--LGFQEARKRLLKVGQDTRPYMRTAYSLFQGSTSEQDLAM----------VGQTDDRS-----HFYANLYLGLYAECREEVDLARHYIGLAVGSKYCATGDYMCSLARVHQKVRGW 201

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: A0A7S1JEY7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JEY7_9EUGL)

HSP 1 Score: 197 bits (502), Expect = 6.500e-58
Identity = 103/192 (53.65%), Postives = 127/192 (66.15%), Query Frame = 0

Query:   93 GMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGASGDYMYDLAKVHIVVRDW 284
            GM +F +G V+ SI D+DR +   PR+ PYMWQRGLSLYYA+  +EG++QFR+DV VNP+D EEAIWAF+CEAR   IGF+ AR  ML  G D RPYMRAAY LF G   E  L +    G ++                FY+NLYLGL+AEAKGD+  A++YI+AA  S Y  SGDYMY LA VH  +R W
Sbjct:  167 GMQKFTKGDVQGSIEDFDRIIAGAPRMEPYMWQRGLSLYYAEELQEGSRQFRRDVAVNPNDTEEAIWAFLCEARDPSIGFEKARTNMLQVGRDSRPYMRAAYDLFRGTGTEEGLKQAAVDGPSE----------------FYSNLYLGLYAEAKGDSVAAQQYISAAVNSPYRRSGDYMYALAVVHKNLRGW 342

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: W7U3Q5_9STRA (Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q5_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.410e-55
Identity = 106/199 (53.27%), Postives = 136/199 (68.34%), Query Frame = 0

Query:   88 VFVGRGMARFREGRVKESIADYDRALLLQ-PRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYG-ASGDYMYDLAKVHIVVRDW 284
            V V  GM  FR G V+ SI  +D ALLL   +L PY+WQRGLSLYYA R+ EGA+QFRKDV VNP+D EEAIWAF+CEA+++G  F+ ARR+ML    D RPYMR AY LF G   E +LA++          G++ + PAA    FYA LYLGL+AEA+ +A+ AR YI A+  + YG A+ DYM  LA+VH+++R W
Sbjct:   81 VLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVDG--FEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAKE----------GANLSSPAA----FYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: Q8GUK5_ARATH (At3g05625 n=9 Tax=Brassicaceae TaxID=3700 RepID=Q8GUK5_ARATH)

HSP 1 Score: 184 bits (468), Expect = 7.240e-54
Identity = 100/196 (51.02%), Postives = 125/196 (63.78%), Query Frame = 0

Query:   90 VGRGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGA-SGDYMYDLAKVHIVVRDW 284
            V RGM  FR+G V  S+A++DRA++L PR + Y+WQRGLSLYY DRFEEGA+QFR DV  NP+D EE+IW F+CEAR+ G+  D AR Q L  G D RP MR AY LF    D  +L      G A              + YFYA+LY GL+ EA+G +E A+ ++TAA  S YG  S DYM  LAKVH + R+W
Sbjct:   73 VRRGMQLFRQGDVAGSVAEFDRAIILDPRQKAYLWQRGLSLYYVDRFEEGAEQFRIDVAQNPNDTEESIWCFICEARLHGV--DVARTQFLEVGRDSRPVMREAYNLFKNGGDPEKLVNDFSSGQA--------------SEYFYASLYAGLYYEAEGKSENAKFHLTAACGSPYGQRSDDYMASLAKVHCLCRNW 252

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: A0A7R9Y5R2_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y5R2_MICPS)

HSP 1 Score: 184 bits (468), Expect = 8.150e-54
Identity = 102/194 (52.58%), Postives = 122/194 (62.89%), Query Frame = 0

Query:   92 RGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYG-ASGDYMYDLAKVHIVVRDW 284
            RGMA+F    V+ S+AD+D+ + L  R  PYMWQRGLSLYY D F+ GA QFR+DV VNP+D EEAIWAF+CEAR     F+GA++ ML  G D R YMR AYALF+G+  E  +    K   AD                FYA LYLGL+ E++GDAE AR  I AAA S YG  SGDYM  LA VH+  R W
Sbjct:   81 RGMAKFARDDVEGSVADFDQVIALDGRRAPYMWQRGLSLYYLDDFDAGAAQFRRDVAVNPNDTEEAIWAFLCEARSPRGSFEGAKKNMLTVGPDPRGYMREAYALFAGDGSEERMREIAKRSAAD---------------EFYAKLYLGLYKESRGDAEGARVDIAAAANSAYGRGSGDYMAALADVHLKRRGW 259

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: A0A7S0D5P5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D5P5_MICPS)

HSP 1 Score: 182 bits (461), Expect = 2.380e-53
Identity = 101/194 (52.06%), Postives = 121/194 (62.37%), Query Frame = 0

Query:   92 RGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGA-SGDYMYDLAKVHIVVRDW 284
            RGMA+F +G V  SIAD+D  +   P   PYMWQRGLSLYYA+R  EG+ QFR+DV VNP+D EEA+WAF+CEAR + IGF+ AR  +L  G D R YMRAAYALF+G  DE  L      G A              A  FY  LYLGL+ EAKGD   A+  + AA  + YG+ SGDYM  LA+VH   R W
Sbjct:   35 RGMAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSLRAVAANGGA--------------AEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPYGSRSGDYMAALAEVHAKRRGW 214

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: C1MGM8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MGM8_MICPC)

HSP 1 Score: 180 bits (457), Expect = 3.740e-53
Identity = 101/194 (52.06%), Postives = 121/194 (62.37%), Query Frame = 0

Query:   92 RGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYG-ASGDYMYDLAKVHIVVRDW 284
            RGMA+F    V+ S+AD+D+ + L  R  PYMWQRGLSLYY D F+ GA QFR+DV VNP+D EEAIWAF+CE R     F+GA++ ML  G D R YMR AYALF+G+  E  +    K   AD                FYA LYLGL+ E++GDAE AR  I AAA S YG  SGDYM  LA VH+  R W
Sbjct:   10 RGMAKFARDDVEGSVADFDQVIALDGRRAPYMWQRGLSLYYLDDFDAGAAQFRRDVAVNPNDTEEAIWAFLCEVR----SFEGAKKNMLTVGPDPRGYMREAYALFAGDGSEERMREIAKRSAAD---------------EFYAKLYLGLYKESRGDAEGARVDIAAAANSAYGRGSGDYMAALADVHLKRRGW 184

[Close]

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Match: UPI00053C0F11 (uncharacterized protein LOC104802790 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0F11)

HSP 1 Score: 182 bits (463), Expect = 3.960e-53
Identity = 99/196 (50.51%), Postives = 125/196 (63.78%), Query Frame = 0

Query:   90 VGRGMARFREGRVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVNPSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGESDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAELARRYITAAAKSDYGA-SGDYMYDLAKVHIVVRDW 284
            + RGM  FR+G V  S+A++DRA+ L PR + Y+WQRGLSLYY DRFEEGA+QFR DV  NP+D EE+IW F+CEAR+ G+  D AR+Q L  G D RP MR AY +F    D  +L      G A+               YFYA+LY GL+ EA+G  E A+ +ITAA +S YG  S DYM  LAKVH + R+W
Sbjct:   73 IRRGMLLFRQGDVSGSLAEFDRAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARLYGV--DEARKQFLEVGRDPRPVMREAYNMFKNGGDPEKLVNIFSSGQAN--------------EYFYASLYSGLYYEAEGKPEEAKSHITAACESPYGQRSDDYMASLAKVHCLCRNW 252

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6801.14720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR87_ECTSI	2.650e-84	59.35	Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5L4Y5_9PHAE	3.510e-84	58.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZJI4_9STRA	2.220e-66	54.85	Binding protein n=1 Tax=Tribonema minus TaxID=3033...	[more]
A0A7S1JEY7_9EUGL	6.500e-58	53.65	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
W7U3Q5_9STRA	1.410e-55	53.27	Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gad...	[more]
Q8GUK5_ARATH	7.240e-54	51.02	At3g05625 n=9 Tax=Brassicaceae TaxID=3700 RepID=Q8...	[more]
A0A7R9Y5R2_MICPS	8.150e-54	52.58	Hypothetical protein n=2 Tax=Micromonas pusilla Ta...	[more]
A0A7S0D5P5_MICPS	2.380e-53	52.06	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]
C1MGM8_MICPC	3.740e-53	52.06	Predicted protein n=1 Tax=Micromonas pusilla (stra...	[more]
UPI00053C0F11	3.960e-53	50.51	uncharacterized protein LOC104802790 n=1 Tax=Taren...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 82..281 e-value: 3.6E-19 score: 71.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 85..264
None	No IPR available	PANTHER	PTHR47908	FAMILY NOT NAMED	coord: 48..284
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..284
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..22
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.768
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 120..153 score: 6.962
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 86..119 score: 8.467
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 86..153 score: 13.404

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6801	contig	H-paniculata_contig6801:3017..8792 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6801.14720.1	mRNA_H-paniculata_contig6801.14720.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6801 2782..9885 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6801.14720.1 ID=prot_H-paniculata_contig6801.14720.1|Name=mRNA_H-paniculata_contig6801.14720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MSSWTSSALLAVPIVLALPALLLTEAFITTIAVGKRTTCSPPFDDDSNKA
TQQQRQQRRRRPQQPQQERVTMSAQDTFESYQGGDYTVFVGRGMARFREG
RVKESIADYDRALLLQPRLRPYMWQRGLSLYYADRFEEGAKQFRKDVDVN
PSDMEEAIWAFMCEARIEGIGFDGARRQMLPAGADRRPYMRAAYALFSGE
SDELELARQMKIGTADLPVGSSGNKPAALAPYFYANLYLGLFAEAKGDAE
LARRYITAAAKSDYGASGDYMYDLAKVHIVVRDW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat
IPR013026	TPR-contain_dom