prot_H-paniculata_contig680.14719.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig680.14719.1
Unique Nameprot_H-paniculata_contig680.14719.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length677
Homology
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BLAST of mRNA_H-paniculata_contig680.14719.1 vs. uniprot
Match: D8LTI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI3_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 3.110e-40
Identity = 99/184 (53.80%), Postives = 125/184 (67.93%), Query Frame = 0 
Query:  426 IAAVKTVSTPYVPPGGR--MKVESAPQND---------GESMGPLWPSGLNRKPVRVSQKARASDGGSSPSRS-SPFRVATAVSGGKSAYGVSIEEYSEKMSRGDVEACTALITNFPTSVPPGQREGLLRPFIDKGALVVWPRPDEALATFATSSLARQAISSKSIPSTALTVELLSNAKQEKR 597
            + A K  +  YVPPG R  +  E A   D         G+ MGPLW S   R PVRVSQ+ R SD  +SP+R  +P RVA  VSGG SAYG +I EYSE+MSR  VEACTA+++NFP ++PPGQR+ +L+ F+  G LVVWPRPDEAL TFAT +LARQA+S+++   + L VELLS A+ EKR
Sbjct:  347 LPAFKPPAARYVPPGRRKALDAELAAAADSGSSGGAAAGDGMGPLWTS---RAPVRVSQRERPSDRDASPARRPAPARVAHVVSGGMSAYGTNISEYSEEMSREQVEACTAVVSNFPVALPPGQRDSMLQSFVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLFVELLSQARVEKR 527
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BLAST of mRNA_H-paniculata_contig680.14719.1 vs. uniprot
Match: A0A6H5JL83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL83_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.050e-38
Identity = 99/184 (53.80%), Postives = 124/184 (67.39%), Query Frame = 0 
Query:  426 IAAVKTVSTPYVPPGGR--MKVESAPQND---------GESMGPLWPSGLNRKPVRVSQKARASDGGSSP-SRSSPFRVATAVSGGKSAYGVSIEEYSEKMSRGDVEACTALITNFPTSVPPGQREGLLRPFIDKGALVVWPRPDEALATFATSSLARQAISSKSIPSTALTVELLSNAKQEKR 597
            + A K  +  YVPPG R  +  E A   D         G+ MGPLW S   R PVRVSQ+ R SD  +SP SR +P RVA  VSGG SAYG +I EYSE+MSR  VEACTA+++NFP ++PPGQR+ +L+  +  G LVVWPRPDEAL TFAT +LARQA+S+++   + L VELLS A+ EKR
Sbjct:  347 LPAFKPPAARYVPPGRRKALDAELAAAADSGSSGGAAAGDGMGPLWTS---RAPVRVSQRERPSDRDASPASRPAPARVAHVVSGGMSAYGTNISEYSEEMSREQVEACTAVVSNFPVALPPGQRDSMLQSLVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLLVELLSLARLEKR 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig680.14719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTI3_ECTSI3.110e-4053.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL83_9PHAE2.050e-3853.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig680contigH-paniculata_contig680:27405..30870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig680.14719.1mRNA_H-paniculata_contig680.14719.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig680 27291..31213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig680.14719.1 ID=prot_H-paniculata_contig680.14719.1|Name=mRNA_H-paniculata_contig680.14719.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=677bp
MSSQKATRLGRDVYVPPNARGGRGKPTCQQDMPQVAARTSDTNTSSTVPI
ANIRVRDKGNVKGTVESRQCVQAKRGAVDMGRDIGEGLHLGTSSDGNAND
AINTELVAGQSALAVETAAAPTDLDCTRSPNVVYIDGRNKSGKDPPPAPI
CDINTNCSRRTDTERSGGAVNTAGSNDGDASREVVATESSIDRGGSTRRK
PRKAWSQYVPPTRRGGGNNAGATTIVANLSCATTMRAPVTSVMNYQSPTR
LGDVAGTAEKPTKRSPEEVSQRISSSELHAAAKKIIQVPNPEYERERETH
GGITPEPRSNHGSTDEIAVKLKALSVTSASIGQHSHTEGETTVNAIETGD
MEAIAYAAVDGDLTAAGVQCERSGGPISDKAAAVSPAAAAEAAETKADVG
IGGASAEEKRGEIPAQEENTRISAKIAAVKTVSTPYVPPGGRMKVESAPQ
NDGESMGPLWPSGLNRKPVRVSQKARASDGGSSPSRSSPFRVATAVSGGK
SAYGVSIEEYSEKMSRGDVEACTALITNFPTSVPPGQREGLLRPFIDKGA
LVVWPRPDEALATFATSSLARQAISSKSIPSTALTVELLSNAKQEKRRAL
LRVELARPGRPPSDASSASRLALGALGIRKSKETRAGTPASARKGLGATA
SGKSGGMRRRGSEPQETVESTDSWDM*
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