prot_H-paniculata_contig67924.14707.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig67924.14707.1
Unique Nameprot_H-paniculata_contig67924.14707.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length215
Homology
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F)

HSP 1 Score: 171 bits (433), Expect = 9.610e-50
Identity = 85/208 (40.87%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    2 VGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRL 209
            VGS +Y+ST TRPDIA+AV   AS   DP ++ ++  KRI RYL+    LG+ +   +    +G + DADWA  ++DRKS +GY+FK++G A+SW S+KQ  V  S+ E EY+A     +E V++R+L   +     G+T ++EDN SAI +++    H R KHI ++ H IR+ +  G + LK  +T D + D+ T+GL++V F +L
Sbjct:   31 VGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYSKNTEKECIG-YSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKFIKL 237          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 173 bits (438), Expect = 1.030e-49
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSR 203
            +VG+ MY++T TRPDIA AV + A   E   +  +   KRI +YL T  DLG+ F G + G  +G + DA+WA  ++ R+STTGY+F LNG AISW S++Q  V  SSTE EY+A     +E V+LR+L   +G  C G+TT F+DN   I L+K    H RTKHI +++H +RE + + V+ L++  T + + D  T+ L+R
Sbjct:   97 LVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 298          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.110e-49
Identity = 85/211 (40.28%), Postives = 131/211 (62.09%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRLIN 211
            +VG+ MY++T TRP+IAYAV + A   E   +  +   KRI +YL T  D+G+ F G   G  +G + DA+WA  ++ R+STTGY+F LNG AISW S++Q  V  SSTE EY+A     +E V+LR+L   +G+  +G+TT+++DN   I L+K    H RTKHI +++H +RE +    + L++  T + + D  T+ L+R    + +N
Sbjct:   25 LVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGELVG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALARDKHNKFVN 234          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: R7QDG7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QDG7_CHOCR)

HSP 1 Score: 168 bits (425), Expect = 2.110e-48
Identity = 86/213 (40.38%), Postives = 125/213 (58.69%), Query Frame = 0
Query:    2 VGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSI-GFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRLINLL 213
            VGS MY+  GTRPD+AYA+ + +    +PC   ++  KR+ RY+    +LGI F  KS    L  F DADWA   + RKST+GY+FK  G AISWSSRKQ +V  S+ E EY+A  E  KE  +LR++   + G     +  +  DN   I+ ++    + R KH+ V++H +R+ I+  V++L H +T     DI T+ L RV FQ+ + LL
Sbjct:   35 VGSLMYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTRNLGIVFDNKSKSPELFGFSDADWAGCSDSRKSTSGYVFKFCGGAISWSSRKQTVVATSTCEAEYIALCEACKEATWLRQVVADVLGLDSDPTIVMGCDNAGTISYAQNESVNRRNKHVDVKYHYVRDAIKRNVISLSHCRTTSMPADILTKALGRVLFQKFVELL 247          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 171 bits (433), Expect = 5.890e-48
Identity = 87/203 (42.86%), Postives = 127/203 (62.56%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSR 203
            +VG+ MY++T TRPDIA AV + A   E   +  +   KRI +YL T  DLG+ F G + G  +G + DA WA  ++ R+STTGY+F LNG AISW S++Q  V  SSTE EY+A     +E V+LR+L   +G  C  +TT+F+DN   I L+K    H RTKHI +++H +RE + + V+ L++  T + + D  T+ L+R
Sbjct:  193 LVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIG-YADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 394          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 166 bits (421), Expect = 1.870e-47
Identity = 85/209 (40.67%), Postives = 121/209 (57.89%), Query Frame = 0
Query:    2 VGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIG-FGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRL 209
            VG  MY+   TRPD+A AV   +    DPC   +   KR+ RYL   P+ G+ F  +  G  +  + DADWA  +E R+ST+GY+F +NG  ISW S+KQ  V  SSTE EY+A  E  KE V+L+   G +G      +  +FEDN  +I L+K    H RTKHI +R+H +RE +  G + L++  T D L D+ T+ ++ V F+ L
Sbjct:   41 VGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESL 248          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 169 bits (427), Expect = 2.220e-47
Identity = 92/209 (44.02%), Postives = 130/209 (62.20%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRL 209
            +VGS  Y+ T TRPD+ Y+V+  +  ME+P  +     KRI RY+      GI +  +  G  L  FVD+D+A  V+DRKST+GY+F L G A+SW+S+KQ +VT S+TE E+VAA     + ++LR + G IG+     TTLF DN S I LSK    H R+KHI VR++ +R+ + E V+ LK   T DQL+DI T+ +    F+RL
Sbjct:  159 LVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERL 365          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM)

HSP 1 Score: 164 bits (415), Expect = 2.680e-47
Identity = 84/189 (44.44%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQT 189
            +VG+ MY++T TRPDIA AV + A   E   +      KRI +YL T  DLG+ F G + G  +G + DA+WA  ++ R+STTGY+F LNG AISW S++Q  V  SSTE EY+A     +E V+LR+L   +G  C G+TT+F+DN   I L+K    H RTKHI +++H +RE + + V+ L++  T
Sbjct:   38 LVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHRVAAKRILKYLKTTQDLGLVFNGGTKGELIG-YADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPT 225          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 167 bits (423), Expect = 2.880e-47
Identity = 90/213 (42.25%), Postives = 136/213 (63.85%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRLINLL 213
            ++GS MY+ T TRPDI YAV   +  ME P     +  KRI RY+    D G+ F  + +G G   + D+D+A  ++DRKST+G+IF LN  AISWSS+KQ +VT SSTE EYVAA     + ++LR++   +G   +G TT++ DNIS I LS+    H R+KHI VR+H +R+   +  + L++ ++G+Q+ DI T+ L +  F++L ++L
Sbjct:  103 IIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 313          
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 171 bits (432), Expect = 4.350e-47
Identity = 92/210 (43.81%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    1 MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPDLGITFGGKSNGH-GLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRKQHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISAINLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRGLSRVTFQRL 209
            +VGS MY+ T TRPD+ + V   +  M +P     +T KRI RYL    D GI +  +  G   L  + D+D+A  ++D KST+GY+F L+G A++WSSRKQ +VT SSTE EYVAA     + ++++ + G IGF      TLF DN S I LSK +  H ++KHI VR+H +RE  +EG++ L H  T +QL DI T+ L   +FQR+
Sbjct:  273 IVGSLMYL-TATRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQRI 481          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig67924.14707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C093D0F9.610e-5040.87LOW QUALITY PROTEIN: secreted RxLR effector protei... [more]
H3GB69_PHYRM1.030e-4943.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P4XPH2_9STRA1.110e-4940.28RxLR effector candidate protein (Fragment) n=1 Tax... [more]
R7QDG7_CHOCR2.110e-4840.38Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
H3GB17_PHYRM5.890e-4842.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A090C2V0_HYAAE1.870e-4740.67RxLR effector candidate protein (Fragment) n=3 Tax... [more]
A0A6D2JBX5_9BRAS2.220e-4744.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G557_PHYRM2.680e-4744.44Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
UPI0009AB427F2.880e-4742.25uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]
A0A1J3D358_NOCCA4.350e-4743.81Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..181
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig67924contigH-paniculata_contig67924:52..696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig67924.14707.1mRNA_H-paniculata_contig67924.14707.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig67924 52..708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig67924.14707.1 ID=prot_H-paniculata_contig67924.14707.1|Name=mRNA_H-paniculata_contig67924.14707.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
MVGSPMYVSTGTRPDIAYAVHQAASRMEDPCREDFSTCKRIFRYLSTVPD
LGITFGGKSNGHGLGRFVDADWAEGVEDRKSTTGYIFKLNGDAISWSSRK
QHLVTWSSTEVEYVAAGEVGKETVYLRELQGSIGFGCRGSTTLFEDNISA
INLSKGSGAHCRTKHIGVRWHGIREWIREGVLALKHVQTGDQLTDISTRG
LSRVTFQRLINLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like