prot_H-paniculata_contig6756.14662.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6756.14662.1
Unique Nameprot_H-paniculata_contig6756.14662.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length264
Homology
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 3.030e-80
Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 0
Query:    1 MGSLVSKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAE 173
            MG+L+S+K+K  ++ +TDQDRAVLDLKNSRDRL RYQK+LD EC KLQAQA AMVKE RKDRALLLLK+KKLKQDQA KA SQLLSV Q+MDTIDWE+QQL+VF+ALKEGN ALNKLHEEMPLDKVE+L+ADTAESIAME+EISKA+GGSWTDANEEDLL ELA +E E A E
Sbjct:    1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPE 173          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 167 bits (424), Expect = 8.290e-48
Identity = 86/160 (53.75%), Postives = 124/160 (77.50%), Query Frame = 0
Query:   16 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESA 175
            ++D D+AVLDLK +RDRLKRYQK+LD E   L  QA A+VKEGRKDRAL+LLK+K+ K +QA+KAD+QL +V +L++T++WE  Q +V  AL EG  ALN LHE MP++ VE L+ADT E++  EQ+++  + G+W+  NE++LL+E  ++++E AAE+A
Sbjct:   23 VSDHDKAVLDLKVARDRLKRYQKKLDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMAAEAA 182          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 144 bits (363), Expect = 1.050e-38
Identity = 82/166 (49.40%), Postives = 121/166 (72.89%), Query Frame = 0
Query:   16 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEA 181
            IT +D+A+LDLKN+RDRLK+YQ RLD E ++L   A  +++ G++DRA L LK+KK K+ Q  +AD  L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A   EIS+ +GGS T  +E+ +L ELA IE+ +A   AAA  EA
Sbjct:   31 ITSKDKAILDLKNARDRLKKYQARLDIEANQLHDSAKRLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIEKMEADALAAAMPEA 196          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.260e-38
Identity = 84/176 (47.73%), Postives = 125/176 (71.02%), Query Frame = 0
Query:    9 RKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVA 184
            R +T+ ++T +D+A+LDLKN+RDRL++YQ RLD E  +L   A  ++   ++DRA L LKVKK K+ Q  +AD  LL+VL+++DT++WE+QQLKVF+ LK GN+ LN +H+EM ++ VE+L+ +T E+     EIS+ +GGS T  +E+ +L ELA IE  +A + A A  EA VA
Sbjct:   25 RSSTQAQVTSKDKAILDLKNARDRLRKYQARLDVEAQQLHESAKKLLLAEKRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEALEAEKLALALPEAPVA 200          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.310e-37
Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 0
Query:    1 MGSLVSKKRKNTKN----------------KITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 167
            MGSL SKK++++ +                +IT +D+A LDLKN+RDRLK+YQ RLD E ++L   A  +++ G++DRA L LK+KK K+ Q  +AD  L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A   EIS+ +GGS T  +E+ +L ELA IE
Sbjct:    1 MGSLNSKKKQSSSSTDNRAGNGAKGNGVRAQITSKDKATLDLKNARDRLKKYQTRLDIEANQLYESAKKLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN)

HSP 1 Score: 139 bits (351), Expect = 6.990e-37
Identity = 75/152 (49.34%), Postives = 112/152 (73.68%), Query Frame = 0
Query:   16 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 167
            IT +D+A+LDLKN+RDR K+YQ RLD E ++L   A  +++ G++DRA L LK+KK K+ Q  +AD  L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A   EIS+ +GGS T  +E+ +L ELA IE
Sbjct:   31 ITSKDKAILDLKNARDRRKKYQARLDIEANQLHDSAKRLLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A4D9D5S7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.950e-37
Identity = 87/176 (49.43%), Postives = 123/176 (69.89%), Query Frame = 0
Query:   16 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPTVV 191
            ITD D+AVLDLK ++DRLKRYQ ++ +E  +L  +A  +V  GRKDRALL+LK+++L++D+  KA  QLL+V QL+  I+WE +QL+VFDALK GN AL  +H+ + L++V+ L+ADTA+SIA EQEIS+ L  + +   EE++L E   +   QA   A      + AP APTVV
Sbjct:   23 ITDHDKAVLDLKVAKDRLKRYQMKMHSETMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDEL---QALIEAPENTPVEAAPGAPTVV 195          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A2D4BUV4_PYTIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUV4_PYTIN)

HSP 1 Score: 146 bits (368), Expect = 9.440e-37
Identity = 84/178 (47.19%), Postives = 129/178 (72.47%), Query Frame = 0
Query:    8 KRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAP 185
            KR   + ++T +D+A+L+LKN+RDRLK+YQ RLD +  +LQ  A  +++  ++DRA L LKVKK K+ Q  +AD  LL+VL+++DT++WESQQLKVF+ LK GN+ L+ +H+EM ++ V++L+ +T E+   E+EIS+ +GG+ T  +E+ +L ELA IE+ +A   AAA  EA  AP
Sbjct:  345 KRAQARAQVTSKDKAILELKNARDRLKKYQARLDVDAQQLQDSAKQLLQAEKRDRAKLALKVKKFKEQQIKQADGHLLTVLEMLDTVEWESQQLKVFEGLKAGNSVLDAIHKEMSVEAVQNLMLETEEAQETEREISRLIGGNLTVEDEDAVLAELADIERMEAEALAAALPEAPSAP 522          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A7S2BZN2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZN2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.120e-36
Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0
Query:    1 MGSLVS-----KKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPT 189
            MGSL+S     K + N K ++T QD+A+LDLK SRDRLK+YQK ++ +  KL  QA+A+ K G+KDRA+L +K+K+ K+ Q  + D+QLL+V +++ TI WE++ +KV +AL+EGN AL+ +H  M +DKVE L+ +TAE+IA++QEI   L G     +E +L  ELA++E +    +A    +  V P  PT
Sbjct:   14 MGSLMSTSKSEKAKPNMKAQLTQQDKAILDLKASRDRLKKYQKAMETDSAKLLKQAIALNKAGKKDRAVLCMKMKRYKEKQVGQVDAQLLTVEEMVQTIQWETETMKVVEALQEGNKALDAIHSVMSVDKVEALMDETAEAIAVQQEIDGLLSGEDIAVDEGELEAELAAMEADLMGTAATPTPQLPVMPAVPT 207          
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A225WD39_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD39_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.350e-36
Identity = 77/152 (50.66%), Postives = 113/152 (74.34%), Query Frame = 0
Query:   16 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 167
            IT +D+A+LDLKN+RDRLK+YQ RLD E ++L   A  +++ G++DRA L LK+KK K+ Q  +AD  L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VEDL+ +T E+ A   EIS+ +GGS T  +E+ +L ELA IE
Sbjct:  337 ITSKDKAILDLKNARDRLKKYQSRLDIEANQLHDTAKRLLQSGKRDRAKLALKLKKYKEQQMQQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEDLMLETEEAQATANEISRIIGGSLTVEDEDAVLTELAEIE 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI3.030e-8079.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA8.290e-4853.75Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
H3H1K0_PHYRM1.050e-3849.40Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6XUA9_9STRA4.260e-3847.73Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VKN6_9STRA2.310e-3745.36Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W2QKK3_PHYPN6.990e-3749.34Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A4D9D5S7_9STRA8.950e-3749.43Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A2D4BUV4_PYTIN9.440e-3747.19Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A7S2BZN2_9STRA1.120e-3644.85Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A225WD39_9STRA5.350e-3650.66Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..50
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 5..209
NoneNo IPR availablePANTHERPTHR22761:SF5CHARGED MULTIVESICULAR BODY PROTEIN 6coord: 5..209
IPR005024Snf7 familyPFAMPF03357Snf7coord: 22..189
e-value: 1.8E-30
score: 105.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6756contigH-paniculata_contig6756:3596..10704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6756.14662.1mRNA_H-paniculata_contig6756.14662.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6756 2491..10753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6756.14662.1 ID=prot_H-paniculata_contig6756.14662.1|Name=mRNA_H-paniculata_contig6756.14662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MGSLVSKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQ
ALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQ
LKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGS
WTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPTVVDKPSTEPVT
EPAAAAATAEPAATAVATAEAEAALPSLEEQLPEAPTTVPVVPVSVAEVE
QALEAERATLLPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam