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Homology
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI) HSP 1 Score: 253 bits (647), Expect = 2.090e-76 Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 2
Query: 50 MGSLVSKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAE 568
MG+L+S+K+K ++ +TDQDRAVLDLKNSRDRL RYQK+LD EC KLQAQA AMVKE RKDRALLLLK+KKLKQDQA KA SQLLSV Q+MDTIDWE+QQL+VF+ALKEGN ALNKLHEEMPLDKVE+L+ADTAESIAME+EISKA+GGSWTDANEEDLL ELA +E E A E
Sbjct: 1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPE 173
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.450e-44 Identity = 90/176 (51.14%), Postives = 131/176 (74.43%), Query Frame = 2
Query: 47 IMGSLVSKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESA 574
++G K KN + ++D D+AVLDLK +RDRLKRYQK+LD E L QA A+VKEGRKDRAL+LLK+K+ K +QA+KAD+QL +V +L++T++WE Q +V AL EG ALN LHE MP++ VE L+ADT E++ EQ+++ + G+W+ NE++LL+E ++++E AAE+A
Sbjct: 8 LLGGGNGAKVKNRPH-VSDHDKAVLDLKVARDRLKRYQKKLDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMAAEAA 182
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM) HSP 1 Score: 144 bits (363), Expect = 9.970e-36 Identity = 82/166 (49.40%), Postives = 121/166 (72.89%), Query Frame = 2
Query: 95 ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEA 592
IT +D+A+LDLKN+RDRLK+YQ RLD E ++L A +++ G++DRA L LK+KK K+ Q +AD L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A EIS+ +GGS T +E+ +L ELA IE+ +A AAA EA
Sbjct: 31 ITSKDKAILDLKNARDRLKKYQARLDIEANQLHDSAKRLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIEKMEADALAAAMPEA 196
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.020e-35 Identity = 84/176 (47.73%), Postives = 125/176 (71.02%), Query Frame = 2
Query: 74 RKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVA 601
R +T+ ++T +D+A+LDLKN+RDRL++YQ RLD E +L A ++ ++DRA L LKVKK K+ Q +AD LL+VL+++DT++WE+QQLKVF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ EIS+ +GGS T +E+ +L ELA IE +A + A A EA VA
Sbjct: 25 RSSTQAQVTSKDKAILDLKNARDRLRKYQARLDVEAQQLHESAKKLLLAEKRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEALEAEKLALALPEAPVA 200
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.600e-35 Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 2
Query: 50 MGSLVSKKRKNTKN----------------KITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 550
MGSL SKK++++ + +IT +D+A LDLKN+RDRLK+YQ RLD E ++L A +++ G++DRA L LK+KK K+ Q +AD L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A EIS+ +GGS T +E+ +L ELA IE
Sbjct: 1 MGSLNSKKKQSSSSTDNRAGNGAKGNGVRAQITSKDKATLDLKNARDRLKKYQTRLDIEANQLYESAKKLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A7S2BZN2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZN2_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.120e-34 Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 2
Query: 50 MGSLVS-----KKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPT 616
MGSL+S K + N K ++T QD+A+LDLK SRDRLK+YQK ++ + KL QA+A+ K G+KDRA+L +K+K+ K+ Q + D+QLL+V +++ TI WE++ +KV +AL+EGN AL+ +H M +DKVE L+ +TAE+IA++QEI L G +E +L ELA++E + +A + V P PT
Sbjct: 14 MGSLMSTSKSEKAKPNMKAQLTQQDKAILDLKASRDRLKKYQKAMETDSAKLLKQAIALNKAGKKDRAVLCMKMKRYKEKQVGQVDAQLLTVEEMVQTIQWETETMKVVEALQEGNKALDAIHSVMSVDKVEALMDETAEAIAVQQEIDGLLSGEDIAVDEGELEAELAAMEADLMGTAATPTPQLPVMPAVPT 207
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A2D4BUV4_PYTIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUV4_PYTIN) HSP 1 Score: 148 bits (374), Expect = 1.770e-34 Identity = 84/180 (46.67%), Postives = 130/180 (72.22%), Query Frame = 2
Query: 65 SKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAP 604
+ KR + ++T +D+A+L+LKN+RDRLK+YQ RLD + +LQ A +++ ++DRA L LKVKK K+ Q +AD LL+VL+++DT++WESQQLKVF+ LK GN+ L+ +H+EM ++ V++L+ +T E+ E+EIS+ +GG+ T +E+ +L ELA IE+ +A AAA EA AP
Sbjct: 343 NSKRAQARAQVTSKDKAILELKNARDRLKKYQARLDVDAQQLQDSAKQLLQAEKRDRAKLALKVKKFKEQQIKQADGHLLTVLEMLDTVEWESQQLKVFEGLKAGNSVLDAIHKEMSVEAVQNLMLETEEAQETEREISRLIGGNLTVEDEDAVLAELADIERMEAEALAAALPEAPSAP 522
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN) HSP 1 Score: 140 bits (352), Expect = 3.630e-34 Identity = 75/158 (47.47%), Postives = 115/158 (72.78%), Query Frame = 2
Query: 77 KNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 550
+ + +IT +D+A+LDLKN+RDR K+YQ RLD E ++L A +++ G++DRA L LK+KK K+ Q +AD L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VE+L+ +T E+ A EIS+ +GGS T +E+ +L ELA IE
Sbjct: 25 RGVRAQITSKDKAILDLKNARDRRKKYQARLDIEANQLHDSAKRLLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 182
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A4D9D5S7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S7_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.920e-34 Identity = 92/198 (46.46%), Postives = 131/198 (66.16%), Query Frame = 2
Query: 50 MGSLVSKKRKNTKNK-------ITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPTVV 622
MG L S+ ++ K ITD D+AVLDLK ++DRLKRYQ ++ +E +L +A +V GRKDRALL+LK+++L++D+ KA QLL+V QL+ I+WE +QL+VFDALK GN AL +H+ + L++V+ L+ADTA+SIA EQEIS+ L + + EE++L E + QA A + AP APTVV
Sbjct: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDKAVLDLKVAKDRLKRYQMKMHSETMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDEL---QALIEAPENTPVEAAPGAPTVV 195
BLAST of mRNA_H-paniculata_contig6756.14662.1 vs. uniprot
Match: A0A225WD39_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD39_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.180e-33 Identity = 83/181 (45.86%), Postives = 124/181 (68.51%), Query Frame = 2
Query: 50 MGSLVSKKRKNTKN--------------KITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQLKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGSWTDANEEDLLDELASIE 550
MGS SKK++++ +IT +D+A+LDLKN+RDRLK+YQ RLD E ++L A +++ G++DRA L LK+KK K+ Q +AD L+ VL ++DT++WE+QQL+VF+ LK GN+ LN +H+EM ++ VEDL+ +T E+ A EIS+ +GGS T +E+ +L ELA IE
Sbjct: 308 MGSTSSKKQRSSSTAGSASGAGASGVRAQITSKDKAILDLKNARDRLKKYQSRLDIEANQLHDTAKRLLQSGKRDRAKLALKLKKYKEQQMQQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEDLMLETEEAQATANEISRIIGGSLTVEDEDAVLTELAEIE 488
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 254.2 |
| Seed ortholog evalue | 6.6e-65 |
| Seed eggNOG ortholog | 2880.D7FYA5 |
| Preferred name | CHMP6 |
| KEGG rclass | RC00502,RC00503,RC01118,RC01946 |
| KEGG ko | ko:K01640,ko:K07204,ko:K08675,ko:K12195,ko:K16302 |
| KEGG TC | 9.A.40.3 |
| KEGG Reaction | R01360,R08090 |
| KEGG Pathway | ko00072,ko00280,ko00281,ko00650,ko01100,ko04136,ko04138,ko04140,ko04144,ko04146,ko04150,ko04151,ko04152,ko04211,ko04213,ko04217,ko04714,ko04910,ko05206,map00072,map00280,map00281,map00650,map01100,map04136,map04138,map04140,map04144,map04146,map04150,map04151,map04152,map04211,map04213,map04217,map04714,map04910,map05206 |
| KEGG Module | M00036,M00088,M00412 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000070,GO:0000278,GO:0000280,GO:0000815,GO:0000819,GO:0000920,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006469,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006996,GO:0006997,GO:0007005,GO:0007032,GO:0007034,GO:0007049,GO:0007059,GO:0007080,GO:0007175,GO:0007176,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008593,GO:0009056,GO:0009057,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010256,GO:0010469,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019058,GO:0019068,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0023051,GO:0023057,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031410,GO:0031974,GO:0031982,GO:0032268,GO:0032269,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0033365,GO:0033673,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0042058,GO:0042059,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042623,GO:0042886,GO:0043086,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045324,GO:0045859,GO:0045936,GO:0046618,GO:0046755,GO:0046907,GO:0047485,GO:0048285,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050000,GO:0050730,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051338,GO:0051348,GO:0051503,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0060255,GO:0061024,GO:0061097,GO:0061099,GO:0061919,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070676,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:0140096,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1903047,GO:1904669,GO:1904895,GO:1904902,GO:2000272 |
| EggNOG free text desc. | vacuolar transport |
| EggNOG OGs | KOG2910@1,KOG2910@2759 |
| Ec32 ortholog description | Snf7 family |
| Ec32 ortholog | Ec-24_003200.1 |
| EC | 3.4.21.53,4.1.3.4 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01002,ko02000,ko03029,ko04131,ko04147 |
| Exons | 6 |
| Model size | 1903 |
| Cds size | 792 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6756.14662.1 >prot_H-paniculata_contig6756.14662.1 ID=prot_H-paniculata_contig6756.14662.1|Name=mRNA_H-paniculata_contig6756.14662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MGSLVSKKRKNTKNKITDQDRAVLDLKNSRDRLKRYQKRLDAECDKLQAQ
ALAMVKEGRKDRALLLLKVKKLKQDQATKADSQLLSVLQLMDTIDWESQQ
LKVFDALKEGNAALNKLHEEMPLDKVEDLLADTAESIAMEQEISKALGGS
WTDANEEDLLDELASIEQEQAAESAAAGMEAQVAPPAPTVVDKPSTEPVT
EPAAAAATAEPAATAVATAEAEAALPSLEEQLPEAPTTVPVVPVSVAEVE
QALEAERATLLPV* back to topmRNA from alignment at H-paniculata_contig6756:2491..10753- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6756.14662.1 ID=mRNA_H-paniculata_contig6756.14662.1|Name=mRNA_H-paniculata_contig6756.14662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8263bp|location=Sequence derived from alignment at H-paniculata_contig6756:2491..10753- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCTACTGGCTTCCAGCTTTCCTTTGGACCTAGGAGCTGTAAGGAATTA
TGGGTTCTCTCGTATCGAAGAAGAGGAAGAATACGAAAAACAAGATTACG
GATCAGGACAGGGCGGTTCTTGACCTCAAAAACTCCCGAGACCGACTCAA
GCGATACCAGAAGAGGGTGGGTTCAAACACCTGTTGCTGTACATAAAATG
AAGACGGTACCTCTAAAGATGGTGGAGTGAGCTAGTACAGGATGATCTGT
ATTAATCAGCTGCCTCAGCAAAGAGATGGGGCGTGACAGCAGGTTTAAGT
GGCGCAGTAATGGCGCGGTCTTCAAATGTGTCAGGAGGTCATGGTTAGAC
GTGGGCTGTATCGTGTGTATGGGTTTACAGCACCCGTCGATCGCTAGTTC
GTCGTTCTTGTTCTGTTTGGATATTACTGTCTAAATTTTTTGGTAGCGAC
CTTTAGGAGGTCCTGCACACCAGCACACATATTTCTACCCCAGACAAATA
CAAACAGTTGCAAATGGTTTTCACAAAAAACTGAGAGTATTTGTCTGAGT
TTCAGAATGAGCTATTCTGCTTTATGTGCCCCCAGGACACATACGGACAC
TTGGCACATGGTTTTCACAATAAACTGAAGGTATTCGCCTGGGTTTCGGA
ATGAGCGGACACATCAAATAAAGTGCGCATCCGTGTTCCTTCGATTTACG
AGTATTATTAGCAATCGTGGATGGTCCGGGGCACATAGGACACACGAACT
CATTGTGAACCTCAGGCGAATACCTTCCGGTTTTGTGAAAACCATTTGCA
AATATTCGTGTTTGTCCGGGGAATGATGTTTGCCAAACCACCAATGTGCC
TAGCGGTGGTGTCCTCGCAGCTGTTGACATAATTATGAAAGGAGCGTTGT
GTATTCCAGCTGCCCGTGTTGTTCCTATTCACCTTGCCTATACACGTATG
ATTACCCCTTCTGCCTAAAGAAGTGTTGAATGTCGAACGTCTTTGTCATC
CTGCGATTATTGCAAGCTTGACCAAGCCTGGACATTAAGAATGTGGCGGA
AGTAGCTTCTGCGAAAAATAATGTATCATAACGATTACTGATGGCATCTA
CGAAAAAATAAATCCAAAAATAAACGAGTATTCGGAACCCTCGCAAAATT
TTCCTCTGCACTCTGACTTTCGAGAAATTCGATTTGCCATGTTATGCGGT
TGGATTTCTTGGAAATCTGAGTTGAGAAATTCGAGACAGGATGTACAGCC
GGTCCCATTCCCCGATTTCTAGCAGAAATCAAAGTTGCCCTTGCGTGTGG
AGTTTCTTGGAGTACTACCATGTGAAGGCGTTAATGTTTTTTATCCTCTT
GTAGCAATACACATCACGAGGATACAGACAAGCCACAGTGTGTGACCCTC
GCTGCCATATAGAACTTGCGGGACTGCTAGCTCGGGGTTTCCTCCACCCA
GCGGAGGAAGCTGTGAACCGCGATCTTATCGTACAATTCCACGGCGGCCT
TGTTCCTGTTGGCCTGAGACATGGTCCTACCGCTCTTCTTCACACTAGCT
CAAGCGTACCACAGTGGTACACTCTGCAGTATCATCCACTGTGCCTTGCT
GACAGCCGATTCGATTCCCTGAGCCTTCATCTCACTCCACACCCATTCCA
CGCATGTAGTCGTCGCAGGATGCATCGCAGGTGACGGTACACCCATGATC
GTATGCTCTTTAAGTGGTAATGTCTTGGGTTGTGTACTCGAGGGACCCAA
AGTTGGAGGGTGTATTTGAATTTCGAATTATGCTGCTTGTACTACTACGC
CTGCAAACCTCCATATTAAACCACCTTCGGGAAATCCGACCCCGTAACAA
ACGCGAATCGACTATAGAGGATCAGATTTTAGCACCCTTCGAAAAATTAG
AAATAGAGAAGTTCGACTGGAAAAATCAGACCCCATAAGAGATGCCTTAC
GCCGGGATTATTCTTCCGTTTTTTCGAAAAGCAAGAATGTCGTACATATC
CATTACACATAAAATTTCGATGTAAACACTTTTACTGCAACTACCATCAT
CCGTGTAAAGTATTAAATAAATATCATAATGGATGATGCAATCGACTCCA
CTTACATAATGATGGCGAAATATTGTTTCATTTTTACCCTAAATTTGTGT
GCTACAGACCACGATACCGAGAGATCATTGAATGATAACAACTGTACACT
TGGATAAAGAGACTTGTGTGCATCGTACAAAAACGTGCCAAACCGATGTA
TTTTTTGTTGCTTTTTTTAATCCGTAGGGCGGGGAATCATGGCCTGTGCC
AGGTATCATTCGAAAGCTGACATCACCGGCTTCCCAATTATATCCTTCAA
TTTTTTCAAATTCTCGGTGGTGACAAGAAGCAAGCGGAAAAAATGGTTGT
TACGGAGTCAACTTGCAACAGCATTCGAGAGGTGCATTAGAAAGCTAGTA
ACGAGAGCTTTCATCCCAAAATAGGTTTTCGCCCCCGGAGGCGCCGCCCT
GAGATAGATAAAAACCGGAGCATCCCTCAGCATACAGGTTATTTCTGTCA
TTCTACATCCTCACATGATGATATTTGAAGCGTTTGGATTACCTATCGCT
CCACCTATATCTATCTGAGTAGGTCCCGTTTAGGGAAGCAGATGTAAGTA
ACAGAGTGGGGGAGCCCCACTCAGCAAAACCAAGCCAGGGGCTGTGGCCA
ACAACTCAGACAGACATAATCCAGAATCCGAGACAGATAATGACCGACAC
AAGACCAGATCACTTACAGTCAACGGCAGATTTAGTACAATGAAACACTG
CCAATATCCGTATAGCGCTCTTTGCGGTCTAATAAAAACCTACGATTGTT
GGGCTATTCTTCGTACCCGAGTCTAAGGATCCAGATGGGAAAACTAACCC
ATAATATCGGACATGATCACGGAAGTTTGTGATCCCTATTCTCGAAGTTT
AGACTCTTTGAACGTTCGGCCCAAAACATCCATATTCCCATATTTTCATT
ATTTCTGTGAAAAACGTGGTCGGCAGAAATGACCCACAGCCGATGCCCCA
CCATCTCGTTAACTCTTTGGTGGATGCCGGAGGCTGTTTGATGTTTTGGA
GCAAAAAATGAATGTGACGAGGAGTATCAAGCCCTAGAGTCGTTGCTCGC
ACAACGGTGCTAAATCCCTGCCGTGGGTGCTATCTTCCCGTGCTTTTTCA
CTTGTGACTTACTTGTATGTGGCGACCAGCGCCCACAGGGTTGAGAGGAA
ACTCTAATCGAGCTATGCACACAAGCAAGTCGCTCATTGTCGTGTCTGGT
TTTCATCCTCGATGCGACGCAGTAGCTCCACTCTGGCTTGAATACCACGG
AAGAGGTAACCTATCAAAACCACTTTTTTTCTCCTAGTGTACATAAAATC
AGGACTGGTGAGCGTTGACGTACCTACCTATTACTATGTCGCATGTTCAG
CTGTGAGTCAATGCTAATGTATTCCTCGTACCTTTGGCGGGTATCTCTAC
CAGGATGTCCTCGTGGACCAGTACAATAGTCAACAGGCTTGCTTCGTATC
TAGCTCCCATGTATCGTGCTGTGCGACTTCTTCCTAAGTATTCTGTTTAT
GGGTTTTCGTCCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT
ACTCAAACACACACACACACACACACACACACTCGCTCGCTTGCTCGCGC
CTCCGGAACAGTTGGACGCGGAATGCGATAAGCTCCAGGCACAAGCGCTG
GCTATGGTGAAGGAGGGTCGGAAAGACAGGGCACTGTTGCTTCTCAAGGT
CAAGAAGTGAGTTCATACTGTATATACGCAACAAAAGACTGCAGCCGACT
GCGGGAGATCCAGAGCGTGGTAACCCGTTTCTTTAACGTTAGAAGTTGTC
ATCGGAGCGAAAATGTATCTGACAACGAGCGTTGTACGTTGTGTTGAGTC
GTTGTAGAGAGAAACCATGCCAATTACTACCTTCCTGTCCTCTTTGTTGC
TTGTTTGTTCTGGACTGTCTGAACAGCGGTGGCTTTCTTATCCCCGTAAA
TTATGTGATATAGGCGTCGTCTCCGAGGAAAATTCGGCAAAGGATGATGC
ATTAGGTGCAAAACGGCGCCGAAAGTGTTGAAAGGGAAAGGTGCACGGCA
GGATCAAGCAGGATGTGAAGGGCGGTAGCTGTTGAGCGCGATTAAAACAG
AGCGATTAGAGAAGAAAACACCGCACATGAGAGAACTGAATTGAAGCAGT
ACTAGGTCACTTGTGAGCACTGCGCTGTGTGTGTGTGTTCGAAGCACGCC
ACGGGGAGCGCACACTTGTGTTGAGAAATAGCGGAGCTGCGGTGCTGCAG
CCACTGTATTTCTTTATTGCGCGCGTGTTTTTGGTGGGCGCCGGTCCGTG
TCAACCGCCGAGTAGTAACATTCCAATATTGCGAAATGAAATCCCCCCCC
CCAAAAAAAAACATGACAGAATAGGAGGGTAACTATTCTCGACAGATATT
GGGTGATACTTACCTCTTTTACGATGTTACTAAGGTGGACACCACTTCAT
CGTTTTCCCCTTACTTCGGATCTTCTTTTGGCATCCTGAAGTATAGCGGT
ACTCTGAATGCGACCGGCTTGCTTTTCGAGGTATTACAATGTCGTTCTGC
ACTTTTTACTTTAATCCCCCACCATAGGTGAAACTTATTGTTGAGCGCTC
AACTCTATTTTTTATAGTGGTGTGATGATGCTGGGCTTCGAACCTGTGAT
CTCCTGGATCAGAAGCAGACAAGATACCTGTCGGTGTCGCCAATGTGAAC
ATGAGGGTAGTTGTTCTCAATAATCGTTGAGTGATTATTACCCGTTTTAA
GGGCCTCCACACACACATATATATATAGAAAAATGGGAGACTTTTGCGGC
ACCGCGTGCGTCTGTGAACCTCGAAGATCGCGTCGCGAAATCAGTGACAA
GAGCACGTGCAAACACCATTTCAAGTGCCCCAGCACCGTAGCCGCAACAA
CACCCATTAACGGAGTAAACCGCAGCAACACTGCGCAATGGTGCGGAATA
CCATGTTGCAGTAGGCACTGCATTTCTCGTCTTGTGAGTTGAACCCCTTT
GAAAGCCTGGCTATCCAGGGGGCTTATTGATAATTCAGGCTTCACCAAAG
AAGCCCGGTGGTTTGTCGTTCTCGCTCTACACTGAATCCAAGGAAAAGAA
GGCCTCTAATCGACCGGAAAAAGGCCTTGTAGACCTGAGGTAAATACGCT
GACCAGCCATCTGAAGCTGGTGGAGGATGTTGAAGAACTTTTCCATCAGT
AACTGTTGATCGTTCGGAACTAATATTATGGCGATTGGTAGAGCGTTATA
CCAGGCTCGCATTCTGCGGCAAAGGTCGCACGAACCAATTATTAGCGGAA
GACAGGGGGTAGGCGCACTAACCTCAAGCGCAACTCGTTCTGCACCCTCC
TAGGCGCAGCGTGGCAAATCTACCGCTTTGTGAGCGAAAGAATAGACGAA
CTTGCCCTGCGGTTGCTAAAAATTCTTAATATATATAGAATTGAAATCGT
AGGCAAAACAAAAAAGATTTTACCTCAAAATCCTTCACTTAACCCAATAA
AAAAATATTTCAACACATAACCATTAAAATGCTTCGAATTGCTATTAAGC
CTAAGCATAAACCTATACCAACTACCTTAACGTGGTCTTATGATTCCGTA
CAGCAGCATCCATTACATGTTCACGTGTAAGTCATGTCATGTCTGGGGAT
AGCTTGTATACACGCGATACACACCCCCTCCCTCCTTCGCCCTCGTCCGC
CCCCCGCCCCCCATAGGTTGAAGCAAGATCAGGCGACAAAGGCTGACTCT
CAACTGCTGAGCGTTTTGCAACTGGTGAGAGCGACTTGCTGCAGTGGCGA
AGAGATGAGGCACTTGCTATAGCCGGGTTTTGCTGTGGTTTGTTTCCATA
GTTTTAGTTGAAGGCATGACTGTGATTCTTCGTGGAGGAAATTTTCACGC
GGCTATTCTGTGTGTTTATGTGTATGTATATATATATATATATATATATA
TATATATGGAGTACTTGCGGTTTCGGTACCCTGCAATACCGAAAAACGGC
TCTTGACGGGTTGGAGAGAAGGGTCACTACAGTATGGGTATATATTATTC
ACACCCCGGAAAACTATTGAGTCACAACTAAATCAACTTAAAACCGAATT
TTCTCACAATCGTTTGCCATCGGATAAGAAGTGTTTTGACCGCGGTTTGG
AGGAACGAATGAACCTGGAAATTATTCGCTCTTTTGCTTGCTTGAGATGA
AGTTGAGTCGGCAGAAAGGCGGAGAATAGTTGACTCAAACAGTCGTAACT
ATTGCCAAGCGATTGTCTAGAGAACTATACAGATGTCCGAGGTGGGATAT
ATTTCGAACACGATACTTACATGCTCACACACTGGTGGACGACCTGATCT
ACACAGATGGATACGATTGACTGGGAGTCTCAGCAGCTGAAAGTTTTCGA
TGCGCTGAAGGAGGGTAACGCCGCTCTGAACAAGCTGCACGAGGAGATGC
CTTTAGACAAGGTGGAGGATCTGTTAGCGGACACCGCGGAGTCCATCGCA
ATGGAACAGGTGAGAAGGGTGGTGGTGCTGGTGGTGCTGGTGTTTTTACT
TCTCGATCCACCTGGAGACCCACGTTCTTATTGAAGATACCTCGACAACC
CAAATGCATTTCAATTATATGTGTTCGTTGTGCCTATTCGTTCTCTCTCT
CTCTATCTTTCTTTCTCCAACCAACCAACCGTCCTCCAGGAAATTTCCAA
GGCCCTCGGAGGGTCGTGGACCGATGCGAACGAAGAGGACTTGCTCGATG
AATTGGCGAGCATTGAACAAGAGCAAGCAGCGGAATCTGCTGCGGCAGGG
ATGGAAGCGCAGGTAGCACCGCCAGCCCCGACCGTGGTCGATAAACCCAG
CACGGAACCGGTGACAGAGCCAGCAGCGGCCGCGGCAACAGCAGAGCCAG
CAGCAACAGCCGTTGCAACAGCAGAAGCAGAAGCTGCGTTGCCGTCGCTG
GAGGAACAGTTGCCCGAGGCACCGACGACCGTGCCCGTTGTGCCAGTCAG
CGTTGCGGAGGTTGAGCAGGCACTGGAGGCGGAACGAGCGACGCTCTTGC
CCGTTTAAGTTATGGCCCAGCCGTAGTGAGTAGTAGCCGGGCCTCGTAAC
GACCAAAATGATTTGTAACATATGACGTGAAAAACGCCGCAAAAGTCAAC
GTTCGGCTCGTGCAGCGTTGCAAGCTATTAATAATTTCCCAGTGTTGTTT
TCAGTCTTGTCATTATCCAGATCTTTTGACACTTGACGCGCCTATGTATA
GGTGTGTGTCTGTGTGTGTATGTGTGTGTATGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGCGTGCGTGTTTGTGTCCGTAATAGTTTCAACAGCCAGT
CATAGATAAGGATGAATACACTGCATTTAAAAACGCCTTGGGAACCTGAC
CTTGCAACGACCAAGATGACATGTTTGTAGTGCTTTCAAACAACAGTCCG
TGGATAATGACGAATATATGACCAATAATTCTAAATGGTACGACACATTA
AGAAGACTGGTTCGACAAAATCCTGTTGGTTTCTAGGGGTTCAAGGAACA
TACGACGTTTTTCACTTTTTTTGTCTGTGGCCGGTGACTGAGAAGCGGAT
GGTATAGCACCGACCTGGTGAGGAGAAGAGACACTTTCCGTCAGGCCAGA
GAGACGGGGAGGGAGTATCATCCATTCAAGAGCCATTACCTAGCAATAAT
TAACGTTGAAGTTTTTTTCTCCATTTCATCGCTGTCCCTCCCAACACGCT
GATTTGAGGTCATGTCGCAAGATTCGAACAAGCGTGAATAGAGTTCAGGG
CCACTGTAGGCAAATTCACACTTGACGGTATACGACATTTCGTAAACAAA
GGACAGTCGAAAAAAAAAAGAGAAAAAGAGGCCAAGAGCGGGCAGGGGGG
TACAACAACAACGTTAGTTATGAGCCTGAGAGTGTTGGACCCAAGACGTA
CGCGTGCTGTTTTTTTGTCAGGTTTGTTTGTGGAGAGGAGGAGAATTCTG
TTGCTGAGCACCTGTTTTCTTGAACGCATGCTCCGGGAGATTTGGACTGT
TGGGTGTGGCTGTTGGATGCTTCTAGGGACGCGGAAATCAACGCTTGTTG
TTTTGATGCTGCCTTATTTTTGTCAAGTTTTGTAATTCATGATCGGATTG
GATGGAGAGGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig6756:2491..10753- >mRNA_H-paniculata_contig6756.14662.1 ID=mRNA_H-paniculata_contig6756.14662.1|Name=mRNA_H-paniculata_contig6756.14662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig6756:2491..10753- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTTCTCTCGTATCGAAGAAGAGGAAGAATACGAAAAACAAGATTAC
GGATCAGGACAGGGCGGTTCTTGACCTCAAAAACTCCCGAGACCGACTCA
AGCGATACCAGAAGAGGATGGGTTCTCTCGTATCGAAGAAGAGGAAGAAT
ACGAAAAACAAGATTACGGATCAGGACAGGGCGGTTCTTGACCTCAAAAA
CTCCCGAGACCGACTCAAGCGATACCAGAAGAGGTTGGACGCGGAATGCG
ATAAGCTCCAGGCACAAGCGCTGGCTATGGTGAAGGAGGGTCGGAAAGAC
AGGGCACTGTTGCTTCTCAAGGTCAAGAATTGGACGCGGAATGCGATAAG
CTCCAGGCACAAGCGCTGGCTATGGTGAAGGAGGGTCGGAAAGACAGGGC
ACTGTTGCTTCTCAAGGTCAAGAAGTTGAAGCAAGATCAGGCGACAAAGG
CTGACTCTCAACTGCTGAGCGTTTTGCAACTGGTTGAAGCAAGATCAGGC
GACAAAGGCTGACTCTCAACTGCTGAGCGTTTTGCAACTGATGGATACGA
TTGACTGGGAGTCTCAGCAGCTGAAAGTTTTCGATGCGCTGAAGGAGGGT
AACGCCGCTCTGAACAAGCTGCACGAGGAGATGCCTTTAGACAAGGTGGA
GGATCTGTTAGCGGACACCGCGGAGTCCATCGCAATGGAACAGATGGATA
CGATTGACTGGGAGTCTCAGCAGCTGAAAGTTTTCGATGCGCTGAAGGAG
GGTAACGCCGCTCTGAACAAGCTGCACGAGGAGATGCCTTTAGACAAGGT
GGAGGATCTGTTAGCGGACACCGCGGAGTCCATCGCAATGGAACAGGAAA
TTTCCAAGGCCCTCGGAGGGTCGTGGACCGATGCGAACGAAGAGGACTTG
CTCGATGAATTGGCGAGCATTGAACAAGAGCAAGCAGCGGAATCTGCTGC
GGCAGGGATGGAAGCGCAGGTAGCACCGCCAGCCCCGACCGTGGTCGATA
AACCCAGCACGGAACCGGTGACAGAGCCAGCAGCGGCCGCGGCAACAGCA
GAGCCAGCAGCAACAGCCGTTGCAACAGCAGAAGCAGAAGCTGCGTTGCC
GTCGCTGGAGGAACAGTTGCCCGAGGCACCGACGACCGTGCCCGTTGTGC
CAGTCAGCGTTGCGGAGGTTGAGCAGGCACTGGAGGCGGAACGAGCGACG
CTCTTGCCCGTTTAAGAAATTTCCAAGGCCCTCGGAGGGTCGTGGACCGA
TGCGAACGAAGAGGACTTGCTCGATGAATTGGCGAGCATTGAACAAGAGC
AAGCAGCGGAATCTGCTGCGGCAGGGATGGAAGCGCAGGTAGCACCGCCA
GCCCCGACCGTGGTCGATAAACCCAGCACGGAACCGGTGACAGAGCCAGC
AGCGGCCGCGGCAACAGCAGAGCCAGCAGCAACAGCCGTTGCAACAGCAG
AAGCAGAAGCTGCGTTGCCGTCGCTGGAGGAACAGTTGCCCGAGGCACCG
ACGACCGTGCCCGTTGTGCCAGTCAGCGTTGCGGAGGTTGAGCAGGCACT
GGAGGCGGAACGAGCGACGCTCTTGCCCGTTTAA back to top
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