prot_H-paniculata_contig66985.14592.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig66985.14592.1
Unique Nameprot_H-paniculata_contig66985.14592.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length41
Homology
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BLAST of mRNA_H-paniculata_contig66985.14592.1 vs. uniprot
Match: A0A7S3JUR3_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUR3_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 9.300e-6
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    3 CPKCEVAWVDGKDDDAMALGC--SMCELWVHAACEGVEAE 40
            CP C  AW    D+DAM L C  S C LWVHAACEG++AE
Sbjct:  259 CPICHHAW--NNDEDAMMLKCDGSSCRLWVHAACEGLDAE 296
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig66985.14592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3JUR3_9STRA9.300e-660.00Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..41
e-value: 2.3E-9
score: 38.7
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig66985contigH-paniculata_contig66985:91..213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig66985.14592.1mRNA_H-paniculata_contig66985.14592.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig66985 91..213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig66985.14592.1 ID=prot_H-paniculata_contig66985.14592.1|Name=mRNA_H-paniculata_contig66985.14592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
SYCPKCEVAWVDGKDDDAMALGCSMCELWVHAACEGVEAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD