prot_H-paniculata_contig6683.14571.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: D8LLT1_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT1_ECTSI) HSP 1 Score: 179 bits (453), Expect = 9.900e-49 Identity = 130/275 (47.27%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 41 SGPIRARAGGVGRATRAEAAAPYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNG-ADPSKRGMGVGGGSGRADVIRGRG------APTXXXXXXXXXXXXXMGNSWTEAPSVAFSNPPPRANTAAVGPGPTP-RVPQSRVTVTQPMRAH--------ATVPNVRAGVFGTALDDRD-EDMDMVAAGVGRDLDDYVAPGMNG 298
SGP+R + G+ R R E AAPY QRPTR ++ V RLG D GTRV V GLN DVM++DIKELF+GVGDLLHC+ID+DR+GRS A+V+F+RREDAE AVSQFHKRTLDG PM VEI+ G A S RG +RGRG APT G R+PQSR+T+T P+ + A +PNVRAG+FGT+LDD D DM GRDLDDYV PGMNG
Sbjct: 67 SGPMRRQ--GISRVAR-ETAAPY--QRPTRPADGVHSRLG---DPVVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDFDRTGRSNGNALVIFKRREDAENAVSQFHKRTLDGTPMIVEIVEGGGATESARGG-----------VRGRGXXXXXXAPTWREPPTSTGAGYQNGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXSRMPQSRITMTGPVASRLQYQQPPQAAIPNVRAGLFGTSLDDVDGHHADMDEDVPGRDLDDYVHPGMNG 322
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A6H5KWS3_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS3_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.490e-40 Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 0
Query: 41 SGPIRARAGGVGRATRAEAAAPYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNG-ADPSKRG 175
SGP+R + G+ RA R E AAPY QRPTR S+ V RLG D GTRV V GLN DVM++DIKELF+GVGDLLHC+IDYDR+GRS A+V+F+RREDAE AVSQFHKRTLDG PM+VEI+ G A S RG
Sbjct: 67 SGPMRRQ--GISRAAR-ETAAPY--QRPTRPSDGVHSRLG---DPVVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDYDRAGRSNGNAVVIFKRREDAENAVSQFHKRTLDGTPMHVEIVEGGGAAESARG 194
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A5A7P803_STRAF (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P803_STRAF) HSP 1 Score: 97.4 bits (241), Expect = 2.480e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 0
Query: 78 RLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADP 171
R+G RV GT++ +S L+H V ++DI+ELFSG+G+L C I YDRSGRS+ A+VVF RR DAE A+ +++ LDG PM +E++ DP
Sbjct: 64 RVGARVSSIETGTKLLISNLHHGVTDEDIEELFSGIGELKSCSIHYDRSGRSEGTAVVVFCRRRDAETAIKRYNNVQLDGMPMRIELVGMNMDP 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A7J0GR35_9ERIC (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GR35_9ERIC) HSP 1 Score: 91.3 bits (225), Expect = 1.730e-18 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 61 APYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 165
APY + S + GGRV GT++ +S L++ V +DIKELFS VGDL I YDRSGRSK A +V+ RR+DA+ AV +++ LDG PM +EI+
Sbjct: 53 APYAPPNAMDQAMSYAGQTGGRVSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEIVYSRRQDAQAAVKRYNNVQLDGKPMKIEIV 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A022RS00_ERYGU (RRM domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RS00_ERYGU) HSP 1 Score: 92.4 bits (228), Expect = 1.800e-18 Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 0
Query: 69 TRASESVFDRLGG-RVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 165
T A+E F +GG RV GT++ VS L+ V ++DIKE+FSGVGDL C + YDR GRS+ A VVF RR DAE A+ +++ LDG PM +EI+
Sbjct: 60 TFAAEPAFPVVGGARVSAIETGTKLLVSNLHFGVSDEDIKEIFSGVGDLKSCSVHYDRVGRSEGTAEVVFFRRRDAEAAIKRYNNVQLDGKPMRIEII 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A2R6PPY6_ACTCC (THO complex subunit 4A like n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PPY6_ACTCC) HSP 1 Score: 91.3 bits (225), Expect = 5.820e-18 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 61 APYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 165
APY + S + GGRV GT++ +S L++ V +DIKELFS VGDL I YDRSGRSK A +V+ RR+DA+ AV +++ LDG PM +EI+
Sbjct: 59 APYTPPNAMDQAMSYAGQTGGRVSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEIVYSRRQDAQAAVKRYNNVQLDGKPMKIEIV 163
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A484NEN9_9ASTE (RRM domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NEN9_9ASTE) HSP 1 Score: 90.9 bits (224), Expect = 8.210e-18 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 80 GGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILP-----------------NGADPSKRGMGVGGGSGR 184
GGR GT++ +S L++ V +DIKELF+ +GD+ H + YDRSGRSK A VVF RR+DA A+ ++H LDG PM +EI+ NG PS G G GGG GR
Sbjct: 81 GGRASSIETGTKIFISNLDYGVSNEDIKELFADIGDMKHYGVHYDRSGRSKGTADVVFSRRQDALTAIKRYHNVQLDGQPMKIEIVGTNIVTPAPPTMGSFGNFNGILPS--GQGRGGGFGR 200
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A388JW90_CHABU (RRM domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JW90_CHABU) HSP 1 Score: 91.3 bits (225), Expect = 1.010e-17 Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 0
Query: 82 RVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADPSKRGMGVGGGSGRADVIRG 190
R E GT++ +S L+ +V DDIKELFS VGDL C + +DRSGRSK A VVF RR DA AV +++ LDG PM ++I+ G G G G+ RA V+ G
Sbjct: 98 RTVELQTGTKLYISNLDFNVSNDDIKELFSEVGDLKRCSVHFDRSGRSKGSAEVVFARRNDALTAVKRYNNVLLDGKPMKIDIIGTNVPTVGVGRGRGVGATRAVVVSG 206
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A251L0L1_MANES (RRM domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A251L0L1_MANES) HSP 1 Score: 90.5 bits (223), Expect = 1.010e-17 Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = 0
Query: 45 RARAGGVGRATR-----AEAAAPYRQ--------QRPTRASESV-FDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADPS 172
R RA G G A R A AAPY Q A + V + L GR GT++ +S L+ V +DIKELFS VGDL C I YDRSGRSK A VVF RR DA AV +++ LDG PM +E+ N A P+
Sbjct: 27 RGRASGPGPARRFTNRGANRAAPYTAPKAPETTWQHDMFADQGVGYPGLAGRSPAIETGTKLYISNLHFGVSNEDIKELFSEVGDLKRCSIHYDRSGRSKGTAEVVFSRRTDAVAAVKRYNNVQLDGKPMKIEMATNVATPA 168
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A4Y7LGA1_PAPSO (RRM domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LGA1_PAPSO) HSP 1 Score: 90.1 bits (222), Expect = 2.030e-17 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 0
Query: 81 GRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL------PNGADPSKRGMGVGGGSGRADVIRGR 191
GR GT++ +S L++ V +DIKELFS VGDL C I YDRSGRSK A VVF RR DA AV +++ LDG PM +EI+ P P G+ +G +G I GR
Sbjct: 89 GRASGIETGTKLYISNLDYGVSNEDIKELFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVGTNIGAPGARPPPTNGI-IGSPNGAPRSIHGR 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig6683.14571.1 ID=prot_H-paniculata_contig6683.14571.1|Name=mRNA_H-paniculata_contig6683.14571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bpback to top |