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Homology
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: D8LLT1_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT1_ECTSI) HSP 1 Score: 179 bits (453), Expect = 5.240e-48 Identity = 130/275 (47.27%), Postives = 154/275 (56.00%), Query Frame = 3
Query: 297 SGPIRARAGGVGRATRAEAAAPYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNG-ADPSKRGMGVGGGSGRADVIRGRG------APTXXXXXXXXXXXXXMGNSWTEAPSVAFSNPPPRANTAAVGPGPTP-RVPQSRVTVTQPMRAH--------ATVPNVRAGVFGTALDDRD-EDMDMVAAGVGRDLDDYVAPGMNG 1070
SGP+R + G+ R R E AAPY QRPTR ++ V RLG D GTRV V GLN DVM++DIKELF+GVGDLLHC+ID+DR+GRS A+V+F+RREDAE AVSQFHKRTLDG PM VEI+ G A S RG +RGRG APT G R+PQSR+T+T P+ + A +PNVRAG+FGT+LDD D DM GRDLDDYV PGMNG
Sbjct: 67 SGPMRRQ--GISRVAR-ETAAPY--QRPTRPADGVHSRLG---DPVVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDFDRTGRSNGNALVIFKRREDAENAVSQFHKRTLDGTPMIVEIVEGGGATESARGG-----------VRGRGXXXXXXAPTWREPPTSTGAGYQNGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXSRMPQSRITMTGPVASRLQYQQPPQAAIPNVRAGLFGTSLDDVDGHHADMDEDVPGRDLDDYVHPGMNG 322
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A6H5KWS3_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS3_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.100e-39 Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 3
Query: 297 SGPIRARAGGVGRATRAEAAAPYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNG-ADPSKRG 701
SGP+R + G+ RA R E AAPY QRPTR S+ V RLG D GTRV V GLN DVM++DIKELF+GVGDLLHC+IDYDR+GRS A+V+F+RREDAE AVSQFHKRTLDG PM+VEI+ G A S RG
Sbjct: 67 SGPMRRQ--GISRAAR-ETAAPY--QRPTRPSDGVHSRLG---DPVVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDYDRAGRSNGNAVVIFKRREDAENAVSQFHKRTLDGTPMHVEIVEGGGAAESARG 194
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A5A7P803_STRAF (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P803_STRAF) HSP 1 Score: 97.4 bits (241), Expect = 6.230e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 3
Query: 408 RLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADP 689
R+G RV GT++ +S L+H V ++DI+ELFSG+G+L C I YDRSGRS+ A+VVF RR DAE A+ +++ LDG PM +E++ DP
Sbjct: 64 RVGARVSSIETGTKLLISNLHHGVTDEDIEELFSGIGELKSCSIHYDRSGRSEGTAVVVFCRRRDAETAIKRYNNVQLDGMPMRIELVGMNMDP 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A7J0GR35_9ERIC (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GR35_9ERIC) HSP 1 Score: 91.3 bits (225), Expect = 3.920e-18 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 3
Query: 357 APYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 671
APY + S + GGRV GT++ +S L++ V +DIKELFS VGDL I YDRSGRSK A +V+ RR+DA+ AV +++ LDG PM +EI+
Sbjct: 53 APYAPPNAMDQAMSYAGQTGGRVSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEIVYSRRQDAQAAVKRYNNVQLDGKPMKIEIV 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A022RS00_ERYGU (RRM domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RS00_ERYGU) HSP 1 Score: 92.4 bits (228), Expect = 4.190e-18 Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 3
Query: 381 TRASESVFDRLGG-RVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 671
T A+E F +GG RV GT++ VS L+ V ++DIKE+FSGVGDL C + YDR GRS+ A VVF RR DAE A+ +++ LDG PM +EI+
Sbjct: 60 TFAAEPAFPVVGGARVSAIETGTKLLVSNLHFGVSDEDIKEIFSGVGDLKSCSVHYDRVGRSEGTAEVVFFRRRDAEAAIKRYNNVQLDGKPMRIEII 157
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A2R6PPY6_ACTCC (THO complex subunit 4A like n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PPY6_ACTCC) HSP 1 Score: 91.3 bits (225), Expect = 1.330e-17 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 3
Query: 357 APYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL 671
APY + S + GGRV GT++ +S L++ V +DIKELFS VGDL I YDRSGRSK A +V+ RR+DA+ AV +++ LDG PM +EI+
Sbjct: 59 APYTPPNAMDQAMSYAGQTGGRVSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEIVYSRRQDAQAAVKRYNNVQLDGKPMKIEIV 163
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A484NEN9_9ASTE (RRM domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NEN9_9ASTE) HSP 1 Score: 90.9 bits (224), Expect = 1.870e-17 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3
Query: 414 GGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILP-----------------NGADPSKRGMGVGGGSGR 728
GGR GT++ +S L++ V +DIKELF+ +GD+ H + YDRSGRSK A VVF RR+DA A+ ++H LDG PM +EI+ NG PS G G GGG GR
Sbjct: 81 GGRASSIETGTKIFISNLDYGVSNEDIKELFADIGDMKHYGVHYDRSGRSKGTADVVFSRRQDALTAIKRYHNVQLDGQPMKIEIVGTNIVTPAPPTMGSFGNFNGILPS--GQGRGGGFGR 200
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A251L0L1_MANES (RRM domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A251L0L1_MANES) HSP 1 Score: 90.5 bits (223), Expect = 2.290e-17 Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = 3
Query: 309 RARAGGVGRATR-----AEAAAPYRQ--------QRPTRASESV-FDRLGGRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADPS 692
R RA G G A R A AAPY Q A + V + L GR GT++ +S L+ V +DIKELFS VGDL C I YDRSGRSK A VVF RR DA AV +++ LDG PM +E+ N A P+
Sbjct: 27 RGRASGPGPARRFTNRGANRAAPYTAPKAPETTWQHDMFADQGVGYPGLAGRSPAIETGTKLYISNLHFGVSNEDIKELFSEVGDLKRCSIHYDRSGRSKGTAEVVFSRRTDAVAAVKRYNNVQLDGKPMKIEMATNVATPA 168
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A388JW90_CHABU (RRM domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JW90_CHABU) HSP 1 Score: 91.3 bits (225), Expect = 2.330e-17 Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 3
Query: 420 RVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEILPNGADPSKRGMGVGGGSGRADVIRG 746
R E GT++ +S L+ +V DDIKELFS VGDL C + +DRSGRSK A VVF RR DA AV +++ LDG PM ++I+ G G G G+ RA V+ G
Sbjct: 98 RTVELQTGTKLYISNLDFNVSNDDIKELFSEVGDLKRCSVHFDRSGRSKGSAEVVFARRNDALTAVKRYNNVLLDGKPMKIDIIGTNVPTVGVGRGRGVGATRAVVVSG 206
BLAST of mRNA_H-paniculata_contig6683.14571.1 vs. uniprot
Match: A0A4Y7LGA1_PAPSO (RRM domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LGA1_PAPSO) HSP 1 Score: 90.1 bits (222), Expect = 4.570e-17 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 3
Query: 417 GRVDETPPGTRVRVSGLNHDVMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQFHKRTLDGAPMNVEIL------PNGADPSKRGMGVGGGSGRADVIRGR 749
GR GT++ +S L++ V +DIKELFS VGDL C I YDRSGRSK A VVF RR DA AV +++ LDG PM +EI+ P P G+ +G +G I GR
Sbjct: 89 GRASGIETGTKLYISNLDYGVSNEDIKELFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVGTNIGAPGARPPPTNGI-IGSPNGAPRSIHGR 204
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 182.2 |
| Seed ortholog evalue | 3.8e-43 |
| Seed eggNOG ortholog | 2880.D8LLT1 |
| Preferred name | YRA1 |
| KEGG ko | ko:K12881 |
| KEGG Pathway | ko03013,ko03015,ko03040,ko05168,map03013,map03015,map03040,map05168 |
| KEGG Module | M00406,M00430 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000346,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016973,GO:0030234,GO:0031503,GO:0032780,GO:0032991,GO:0033036,GO:0033554,GO:0034613,GO:0034641,GO:0042030,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0050790,GO:0050896,GO:0051028,GO:0051095,GO:0051097,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051336,GO:0051346,GO:0051641,GO:0051649,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363,GO:1902280,GO:1902281,GO:1990119 |
| EggNOG free text desc. | mRNA transport |
| EggNOG OGs | KOG0533@1,KOG0533@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041 |
| Exons | 5 |
| Model size | 1113 |
| Cds size | 936 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6683.14571.1 >prot_H-paniculata_contig6683.14571.1 ID=prot_H-paniculata_contig6683.14571.1|Name=mRNA_H-paniculata_contig6683.14571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
MRSSQHHVPRTQSVVTVAGGGTFRSAIASTRAPQPSVGGSSGPIRARAGG
VGRATRAEAAAPYRQQRPTRASESVFDRLGGRVDETPPGTRVRVSGLNHD
VMEDDIKELFSGVGDLLHCEIDYDRSGRSKEMAMVVFRRREDAELAVSQF
HKRTLDGAPMNVEILPNGADPSKRGMGVGGGSGRADVIRGRGAPTVSGGG
GGGGGGGGMGNSWTEAPSVAFSNPPPRANTAAVGPGPTPRVPQSRVTVTQ
PMRAHATVPNVRAGVFGTALDDRDEDMDMVAAGVGRDLDDYVAPGMNGGF
MGGGAMGSGGMG back to topmRNA from alignment at H-paniculata_contig6683:498..10706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6683.14571.1 ID=mRNA_H-paniculata_contig6683.14571.1|Name=mRNA_H-paniculata_contig6683.14571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10209bp|location=Sequence derived from alignment at H-paniculata_contig6683:498..10706+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGAGACTGACAATCAATCTGGAATCGGAGGCGGCGGCAGCGGCAGCGG
CGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCACTATCG
CTCACCACCACTAACAATAACAACTACACCACAAAACAGCGTTGCTTTTT
AATTCCCTCTTCACGCCAGCGGCGCCATGAGAAGCAGCCAGCATCACGTC
CCCAGGACGCAGTCCGTAGTTACGGTGGCCGGGGGCGGGACATTCCGATC
CGCCATCGCGTCCACTAGGGCCCCGCAGCCGAGTGTCGGGGGAAGCTCGG
GGCCGATCCGCGCACGCGCAGGGGGGGTTGGGCGCGCCACGCGGGCGGAG
GCGGCGGCGCCGTACAGACAACAAAGGCCTACGCGCGCCTCGGAAAGTGT
GTTCGATCGGCTAGGTGAGATCGAGAGACAAGGAGAGAAGAAGAGCATTG
GGATATTATTGTGATGCGAGCGGGGGATAGGGGGAGAGGGGCGTGGGTTC
AGTCGCAGGGCTGAGTTGGTGCACGTACCTTTGGCTGTCGTGCTCTGGTT
GTTGGGGTAGATTTGGGCTGCTTCTCGTCAGTTAGTCGTGATGTTGGTCA
CCCGCCAGAGCAAAGTGCCTTTAGTCTCTAGATGTCTCATCTTGGCGGTC
TGCTGCTCATCGCCAGGGTGGAATTTCGAGTTTTACCTCTTGCCCAATTT
CAGGACTTGCGATTGAGCGTTAGGTTTTATGGACTCATCTATTGTACATG
GCGTTGGCCGCCATCTAACTGCGCCTCCGTTTGATGTAGTGTTGGCGGTC
GGACTTCACTCTCGTTCTTATTGTGCAGTGCAGTGCAGCAACGCACAATG
GCTTTTCTTGTTCATGACATTCAGGAATACCAGGGACGTGCTGACTTTTT
TCGTCTGAAACACGAGTAAGAGAGTAGACAGTCGCGCAAAACAGAAAGTC
ATTTGAGTAGACCACAGAATAAAATGTCAAATGTTGGCATGTGGATTACT
TTCAGGGCGAAGACTGTTGGATGGTTTCAGGCATGTCTTGCAGGGACGGC
AGCGGTGGCGCCGTTTTTCAAAGTTGGCGTCAACCGCTCAACTATGAAAC
GGGTCTGCTTGCGAGGACGTTGTTTTTTTGCGGAGCCAAGTCATGCCTCT
CTTGATTCCTCCTTCTTATTCTATCTATCTTCAAAATTGAGAGTTAATGA
CCTTACTGTCTGTACTCCTGATTGTGCTATAAAGTCTCTGACTATTGATG
GTTTTCGAAGTGGAGAAAACGTGGTCCTGTACTGCATTTTTAAAAATCTG
GTGCGTTCTCTAGAGCCATGTATTAGGGTTTGCCAATCGTACGTTGGCTG
TCTCAAGCACCCAATGTGTGTATGTACGTCAACATGTATGCAGGGGCCTC
TTTCGGACTGTGCAACACACGCTTGGGTATTGTTTGTCTGTCCAGCTGTT
TCTGCAGGGGGACAGGTCATAGGTCTTCGGCAAGCAACTTGTTCGATTTC
ACGGCGCGTTGAAACACGGTTGGACTATTAGTGTACTCTGATACATGGAA
TGAAATCTACGGCAATTTTTGCTTCGCCCAGTTGCAATTTCGTCCTCGCA
AAACGACCCTCCACTACGCTCCATACACGGCAATTTTCCCACAATGAACC
AAACCACCTTCGGAATTGTTTTCTGAAGGATGGAGTATAGTAGTACATAT
TTCATATTCTAATGGAATGCCAACTATATAATATCGTAAATAGCTCACTT
TCAGGCGGATCCAATGGCCACATCCTATTTTATGTTCTCTTCTTGGTGAA
TGTCTCCGTTTCCCGATTATCGTTCGGTTAAAATAAGCTCAACTGGGGGT
CAATTTATTTTATTAACGCAGGTTAGATGTCTTGTAGAAGGACTCACTTG
TGCCTTAGTGAATTTTATTTGAAAAAAAAAACAAACGAAATATCGAAACA
TGAAAACCGAGCAGCTATTGGTCTCTAATCGTATATGGCACTCGCTCACC
CACTCCACACTTTCAACAAAAACAACATTCAAACAGGAGGGTGTTTGTGG
TGCACGTGCTTGAGTCTTGCACATCGGTCTCGACGGAATCAGTGTGTGAT
ATCGTCACTGGAAAAGAGAGCTCGTCGCTGTGCAGACACCCACTCCAAGC
CCAGTCCAGTGCACGCAGCACGCAAGGAATTGACATGGTTCGGCGCACAT
GATTCCAGCATTCGACGTTTATCGCCGACAAGCTCATTTTCCCCCCCCCG
AACATTCTTTAAGAAAAAAGACACCGAGCAGGTGAACAAATAAGAATTGC
CCCCCTGAAATGGTGTCGACCCGCTGAGAGATACAAAAAAATGCTGATGA
AGGATCTTCGGTTAACGACCGAACGAAATCTTATTACAGTTGTGTGGCAA
TCTTGGTATTGTCTGAATAACGTAGGGGTATTAGGTCGAGATATTTTCAA
TGGGCAGCCTACGGGAATCTGTATAGGTACGTAGTAGTTAGGGAAAGAAA
ACAATGCAAGAGCAGATCATTCGAAAAGACGCTATTTTTTCAACAGGAAA
CGGGAGAACCGACTACTCGTATATGGGCGGACCGGTTCACTGGTTTTTCC
GTTTGTTACACGATTCGTGGCCTATATACTTCTGAAAACAAGTACAAGGC
AGGCTCAAGTGGACAGATAGCCTCTGACTATTGAAGTGCAAAAATATGTG
TTGCATGAACTATAGAATAAGCAGCTCCGGTTTAAACGGAGAAGGGAGAT
TGGGGCCATGTTGCTCACCATCTGAAGTGTTTCATGGAATCAATGGAAAT
CCTCTACTGAGGAACTGGTATACAGACCTTTTTTGCGCCAGGGCTGGGCC
TAGCGCGCGTTTGCCGAGCAAAGCATGCGTAGGGCATGGATCAAATTGTC
CCCAGGAATCTCTGGGTGTTTTTTTATTGAGGGTTATATGCTCAGTTGAG
CAAGTAGTGCAGTCGAGACTCGTTGCCGAAGCCGTATTCGCGAATTAGAT
ATGCCTAATGATCGAAAAATGTGAAACAATTGAAAGATCAGGAATGACTC
GTAGGATGCTTGACAATCAGAAGAGCAAGAAGATGTTGGAAGTTTCTCCA
AGAGAATTTCGTCCTCCCAGTCTTGCACTCCCGAACGAATACAAATCCTG
TTGAAGTTTAGACGAAAATTGGAAAGTATTCGCCTGAAGGTTCAGCATGA
GCACGTGCATCTGCCCTGGAACCTCCGTGTCCTTCTGTGAAATACTAATT
AAAAGGAGGAAACAGAGGTGAAGACTGTATTGTTAGTGTCATCCCCACGT
GCTGAAACACAACTATCTGAATAAACATTGGTGTAAACCATTAGAAATAT
GCGCTTTTGGGTGGGGGGGGGGGAGGGATTTCTTCTATATTTGCAATATA
TATATTCATTAGATTTACTATTTCCTACAAAAGTTGGAACATGAACAATT
CATTCCATCAGTCAAACCTGGAAACCAATGTATTATTGCGGCTTTCTTGT
TGATGTTCGTTGCAATGATTTCAAAACTCGAAGCAGTAATAATACAATGT
GGAATAAATACACCGCTAGGTGGTTTTTATTGTGTTGTGTTGATTGGCTG
GTTGCTGTGTCGAGGAGAGGGTATTTTTTGGAGTATTGAGGAGGCAGGCA
AACGACAAAGACCAATTGATGACCCCCACGTTTGGATTCTTATATCGTGG
CGGCGTGTCTCATCAGGCGGAAGGGTTGATGAAACCCCCCCCGGAACGCG
CGTTCGCGTGTCTGGGCTGAACCATGACGTAATGGAAGATGACATCAAGG
AGCTATTCTCGGGCGTGGGGGACCTACTGCACTGCGAGGTAGGTTTCTGT
TGGCCGAATTTTTGTTCAAGCCCATCTAAAGTTAATGGTCTGGTGGCTGG
TGTTGTTGGTGTTTCTGTAGATGTCAAATTGCATGCGGATAGGCCTTGTG
TGGACATGCCAAGCCGTATTACATCAGGATAATAGCCTGCTTTAGCTGCA
CTGTTTCGTGACTGTACACATATGGAATATGCGTATGTGTGGCGCTGGGG
CGGGGGGCGGGGGGAGTCTCTTATGCCAGCGGGACTGGACTCGTCGACAA
TTTAGGGTGACACCAGAAACATGCTGTATGCCACCCTCACTGATAATATG
TTTTCAACGCAATTTTCTGGATAACTACAGTGGTATAGTGGTGAGCGAAA
ACGTTGTGATGGCTAAATCTTGATCGTTTCGAGATACGAAGGAATAGCGT
AGACCTCCCACTGGTATGCTGTCGACATAGTAGACGGTAGTCATTAGCCA
TTGAGTGAAGATGTTTTTTCTCTAGGAAAATGCAATGAAGCTCTTACTTT
TCAAGAAATCAATTTTTTGGGAAAGATTTCGTGACCTAGATGAATACAAC
ACTTGAAATGGTTTGGCGTTAAGTTTTTTTCCCGAAGTATTGGCCTGTGA
TTCAGCATCTGCGGAATGAGATGGCACATTAACTCAAGTGTTGACTTCAC
TCTACGTTTTATTGGTATTCGTTAGCCGGACTCTACATGGAGTTTGATGG
TCCAGCCAGGGTAATTGAATAAGCGTGTTCATGCTTAGCTTCAGGCGAAT
ACTTTCTAATTTCCGTCTAAACAATTGAAATATTTGTCTCTATCCGTCGG
GTGAAATGCTTCATCACCCGCTTGGGTGATGACGGCGGCAGGGGGTCTTA
ATCCGCCTCAAACTAGCAGGATACCGCACTGAATAGGGAGTAACCGCAGT
ACTTGATCCTGTCTATAGTGGGCAGTTTTTCGGGGTTTCCACACCAACTG
GCCGTGGCAGTGAGTGAAGCGAAAAGGACTAGGGATTGCTAGATGAAGTA
AGCAAGCCTGCCGTCTGGATCATTCAGAAACGCAGGCTATCGGAAAGCTG
GGGGAGATATGCCTTTATGTAGGGCGTGTCTGCACTGCTTAGCTGCGTCT
AAGTAGGTGAACATGCACACTGGAAGTTTTTCTCGAATACCGTAGAGTGT
TGTCTGGGTTCATCACGTACAACTGTAACAGGAGGGCGTCATAATCCATA
CGGTTTCTGAACGACAGCCAGCACCCATAAGATGGATGAGTTGGAGTCCA
CTATCCCTGTTGGCTAAATTCTCGTGTCCCACACACTGACCGCTCACGTC
ACCATGGCTTCCTAGCCTGTACGCAAAGTTCCTCTCCGGGTTTGGAAGCT
GCTTTCTCCCGAGTCTGTGAATAATATAGACCCTTCGCGGGGAGGCAAGA
AGCCATGTTGACGTGAGCGTTTGCGGCATGAAGCGCGAAAACACAGCAAA
CGAGAAATGTCGACCTTTCCCGTGCTTGTTCACAAATCGAGCTCTGATTC
ATGCGTGTTCTGTGTGTCCAAGCTCGTCCGTTTGCGCCCTCTTGAACGCA
GAGAAAACCCTGCAAGATTGATGCATTGCCTCTCGTTGTTGTGACTGCCG
CCCTCAACCTGAGCATAAGTTTTCATCAAGGGAGTGCAGAATTCCGGGAC
GCGTGGAGGGGCTTCTGCTCTTCATCGAGAACTATACCTCCTTTGTGTCA
TTTTGGTGTAGGCAGCCACAACAACAAATACGAGAGTCAACACATGATTT
TCCCCCGGGGAGATATCTCCGTTGAGAAGGGACACACACATACGAGGCTC
TGGAGAGACTTGCCACAGGAGAAGGGGATGGATCAAAGGTCCGAATTTGA
AACCGTCCGGGAGAGCTGATACCCCTAGTGTCCGTCGGACTGTCTTTGCT
TATACCACCCATGTTGTCATCGCTTCCAAGTCTGCAAGGATTGAAAGTAA
GGTGGCTTTGGTTACCTGTGCAGGAAGGGGATTGGAAGTCACGTTGGCGG
TGGGCGGTCGGTGGGGGCGTGTGGGACATGGGAATTCAGCCGACGCGGAG
GAACCCTTAGGAGATATATAATAAAGTCAAGATCTTGACCCTTGTACGCC
GCGTCCCATCTCATCTGTATCTATCGCTATCGCCTTCAGAAAAACGGGGG
GAAACGATGGATATGATATGATTCACGGAGATATGGAACCACAGCTGTAC
AGACATCCGGTCTAGTCCAGACAGCGCAGACAGATAATTGGCATGGTACT
GCCTACAACGACTCCAGAGCTCGTCAGTTGTTGTCCAATACTAGTGCCTT
TTTTTTTTGGTCGAATTGCCTCCGGCGCTCGAAGGCTGCGAGCCCCTGAC
GTGACACTCAGTTGGGATCTTGACGGCAGGAGAATAACCAAAGACGGTTT
TTGTCATTATTCAGTACGTTAAGGTGGTGGTGGTCATCGTTGTGTTGGAA
CATCTTATCAAGTCGGTACTCAAATGCCTTCTTGCAAACGAATCTTCATG
CGAGAGTAGGGAAAACTTGGGTTGAGGACAAGTACGAAGTGCACGGTGTT
ATCGAGGCCCTGCTGATTGTAGAATAAGAGTACAATCTTGAACCGTGGAT
ATGGGCCAAACCTGGAGGGGCCAATCGCACGCGTTTATAAAAAGGGAACT
TGGTCCGTGGCGTTGTGTGGGTGTGGGTGTTGGTGTGAGTATTTTTTACT
GTTGGGTTTTTTTTCGTGTCTCGCAAAGCCTAGTGTGATTGGCATGCCCC
TTGTCTACAGAGGAGAGCAAAGTCCCCAAAGCATTCGTGTCTAGTGCGGT
ACTCTCGTGAAGAGCCGCCCATAACTGTAGGTACCGTATTTACATACGTG
TTTTATAAAGCAACCAGCTCTACGTACATCTTGGCCACACAAGAACGAGA
AAAATACTAGAATGCACACGATCCAGACGTTTGGGTAGCCTCTCTCAGGA
TAGTGTCATGCTCCAAACTTGACACCACTCCCCATCGTAGCATAGAAATG
CTCAACTGTGTGCAAACCGCTTTCGATTGCAATCTTAGCGGGCATGCTTC
TGAGGTTGCCTCGATTCCTCGCCTTCAAACCCATGCTAACTATTGACCCT
GTTTTGCGTCGTGCATCCGACCACTGAGTTGTAGTGGCCGCCGAGTATGC
CAAGAAACACGGTGGGAGTCTACGTTTAGGAGATTTCAACTTCCCAAGAG
AGGAACCAGCTCGTTGCCTTCATTTTTTCGGGTTGGTAGGCAATAGTTGA
TAAGTCTTGGTGCATTATCCTCTGATGGGACACTATCGTGTACGGTTCGG
AGAGCAGTTGTCAAAGATGAGGACAACTGTGTTGTATTTTTCGGTGCTGG
GCCTGTCGCCGCTGTCCCGCTGCGCGTTTCCCGGCACGATGCACGCCGCA
CGAAATGCAGTCACACAGAAGTGAGAGGCCCCTCCAGTGAGTAGGGCGAG
AATAGAATGGGGGTCGCGTCCAGGCACACAAAAGGCTAACTACAATCGAA
AAATGCACAAAAATCGAATTAAATGTTTTTGTTGCGGTTGTCAACGTTTG
GGGTTGCCACAATGTAGTTGAGTTCAATACAGGCGTAACCTGAAACGTTC
ACGGTGAACAAATCAGACGGACGACGACGGTAGCTTGGCAGCGGCCATTC
TCCAAAGACGTTCAGTTCCTGTTTCTAAAATCCCTGCATTTGCGACCCTA
TCCGAGATTTTTTAACCAGATCAACGACGTGATCGTTTTCGTGCTCCTGA
AAATTCTTCACTCCCTGGACAACTACGAATACTCGGCGTGTTCGCCACGA
AAATGAAGAAGTTTTCTACGAGTTTCAGATGAAGCTAGTGTGTTTAATGT
GCCCCGGACCTTCCACGACTGCTAATAATGCTCATAAGTCGAATAGCCAG
GGTTAGTTACTTGATTTTATGTATCCGTCCATTCTGAAACTCAGGCGAAT
ACTTTCAGTTTGTTGTAAAGACCATTCGTAAGTATTCGTATTTGTCGGGA
GTGAAACTTTTGCAACCCCCCCCCCCACCAACACCACCACCACCACCACC
ATAGAACCAACCATCCCATTACTGTTATTTTTCACCAGATTGACTATGAT
CGCAGCGGGCGCTCTAAAGAGATGGCCATGGTCGTGTTTCGGAGGCGTGA
GGACGCCGAGCTCGCGGTTTCCCAATTCCACAAACGTACCCTGGATGGTG
CACCCATGAACGTCGAAATTCTGCCTAACGGGGCCGACCCTTCCAAGCGA
GGCATGGGGGTGGGCGGAGGAAGCGGACGGGCAGATGTCATTCGTGGTAG
GGGCGCTCCCACTGTGAGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGCG
GCATGGGCAACAGTTGGACGGGTGAGTGCGGAGCGAAGAAATTGAGTGAG
ATTATACCTGTATTATATCATTCACGTGTAACAGTGGTGAAGATTTCCTC
AATTAACTGCTCTGTGAAACAAACGGAAATTTAAGAACTATGAAATATGA
TTTCAAGGACGAGGTATCCGAGAAATCGCAATTGAGGGTGACATCATACA
GGGCACGGCCCAATTACTAGGGTTTAGTATGCTGCCGCAAATCCTGCATG
AAAGCAACTTTTTTCCTCCCCCGGAGATTGGTCATTTTCCCGTCAATCTA
CCCTCTAACACCTGGAAAAAATTAAAATACAGAAAGAAAAAAATTGTTCC
AGGAAGTCCGATGCATAAATACCAGCTATGTCGTAACGAGAGAGATCAGC
CAAGTTGTCATGTCCCGATTGTCACGGCTGACTTTGACAGGTCGCCTGTT
GCTGTGCCTGTGGGTATCGTTGCTCATAACAACACACCACACACGCAGCG
GCTATTATTCGCTACGTAAATGCCGGGATGATATATGCGGCTGCCTGACA
GCTCTTGAGTGCCGCAAATATCGTGCTGCATGCAGCAATACTGTCTGTAC
CTTTCGTTGGGCGCAATCTGTCAGCTGTACCATTTGGTACGTCAAGTACA
CCGCGCTCCAACTGCTGTGCCAGTCCTTGACGTGCGTGGATTTTGTCAGA
ATGACTGATGCGCTTTTACACCTAGTATCGACATCTGATACTGTAGAGTC
ACAGACAATCAAAACACATGACGATCCCGCCCCGCCGTACTATTTATTTC
CCACATTTTCTGTCCGTCGAAATTCCGTACCCTCCGCCCTTTTCGACGCA
GGACTGTCAAAAACTGCGCCGCGAAATTTGTCGCAATGCAGGCTTGCTGG
TCTGGGTTAAGGGGAGTCATTGACGGTAATGCTCGTCCTTGACTTTCCTC
TTCTTCCTCTTACCCCCCCACCGTCGCCACTTTCCTTTCCTCTCCCGTGT
ACTGTGTCCCCTCCCCCTCTTCTCTTTGTTGCACCTTCTACACCGTTCGC
CCTCACTATTATTCCCACAGAAGCTCCTTCTGTTGCTTTCTCCAACCCCC
CGCCGCGGGCCAACACTGCTGCTGTTGGCCCTGGTCCCACCCCTCGTGTG
CCGCAGTCGCGCGTGACGGTGACGCAGCCCATGCGCGCCCACGCTACTGT
CCCTAATGTGCGCGCTGGTGTGTTCGGTACTGCGCTCGATGATAGAGGTG
AGGTGGGGGGGGGAGGGGCAAGAGGGGAGCATCTATCAAGGAGGGAGTAT
CATTCAAGATACATAAAGCGAATATTATTCACTTGGCGTCTGATGAATCA
GAATTTATCACCAGTTTATTAACGTTGGGAGTACTGTCTTTTCGATTGGT
GTTGATAAGAATAATATACAGTATTGAAATAGTGGTCGATGCGTCTCACC
TGTTGGCCTTATATTGCTATGTTTATACCTATTGTTGGATGGTGTTCCGT
TTTTGTCAAGATATTTATACGTACCTAGCGTATCATTTCATCACTCATGT
GTGCAGAGTGCATACATGTAGCATGGCACTACAGGGAACGCTGACGACAT
TATTCGCCTGATTACCGTAGAATCGCCCCCAAACTGTTGATGCATCCAAA
GACTTCTTCGCAGCATGAACGACCATTCCTTACCAGAAGCAAACACTGAC
CGACCTTGACATAGTGCTGAGTTTATAAATTGATACCTAATGCCATTGTG
CTGAGATCGCGCAATTTCTGGGGGTATAATTTTTGTGATGGACAATAAAA
GTACAGTGTCAAATTTTAAAGTTTGGACTCGCTCCACTTGCTATAATACA
CGCATTGTGAATTATTGAACACGACCCACCCTCACCTACCCAGACGAAGA
CATGGACATGGTGGCCGCAGGCGTCGGCCGAGACCTGGACGATTATGTTG
CCCCCGGGATGAATGGCGGGTTTATGGGAGGGGGCGCAATGGGAAGTGGT
GGCATGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6683:498..10706+ >mRNA_H-paniculata_contig6683.14571.1 ID=mRNA_H-paniculata_contig6683.14571.1|Name=mRNA_H-paniculata_contig6683.14571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1872bp|location=Sequence derived from alignment at H-paniculata_contig6683:498..10706+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGAAGCAGCCAGCATCACGTCCCCAGGACGCAGTCCGTAGTTACGGT
GGCCGGGGGCGGGACATTCCGATCCGCCATCGCGTCCACTAGGGCCCCGC
AGCCGAGTGTCGGGGGAAGCTCGGGGCCGATCCGCGCACGCGCAGGGGGG
GTTGGGCGCGCCACGCGGGCGGAGGCGGCGGCGCCGTACAGACAACAAAG
GCCTACGCGCGCCTCGGAAAGTGTGTTCGATCGGCTAGATGAGAAGCAGC
CAGCATCACGTCCCCAGGACGCAGTCCGTAGTTACGGTGGCCGGGGGCGG
GACATTCCGATCCGCCATCGCGTCCACTAGGGCCCCGCAGCCGAGTGTCG
GGGGAAGCTCGGGGCCGATCCGCGCACGCGCAGGGGGGGTTGGGCGCGCC
ACGCGGGCGGAGGCGGCGGCGCCGTACAGACAACAAAGGCCTACGCGCGC
CTCGGAAAGTGTGTTCGATCGGCTAGGCGGAAGGGTTGATGAAACCCCCC
CCGGAACGCGCGTTCGCGTGTCTGGGCTGAACCATGACGTAATGGAAGAT
GACATCAAGGAGCTATTCTCGGGCGTGGGGGACCTACTGCACTGCGAGGC
GGAAGGGTTGATGAAACCCCCCCCGGAACGCGCGTTCGCGTGTCTGGGCT
GAACCATGACGTAATGGAAGATGACATCAAGGAGCTATTCTCGGGCGTGG
GGGACCTACTGCACTGCGAGATTGACTATGATCGCAGCGGGCGCTCTAAA
GAGATGGCCATGGTCGTGTTTCGGAGGCGTGAGGACGCCGAGCTCGCGGT
TTCCCAATTCCACAAACGTACCCTGGATGGTGCACCCATGAACGTCGAAA
TTCTGCCTAACGGGGCCGACCCTTCCAAGCGAGGCATGGGGGTGGGCGGA
GGAAGCGGACGGGCAGATGTCATTCGTGGTAGGGGCGCTCCCACTGTGAG
TGGTGGTGGTGGTGGTGGCGGTGGCGGTGGCGGCATGGGCAACAGTTGGA
CGGATTGACTATGATCGCAGCGGGCGCTCTAAAGAGATGGCCATGGTCGT
GTTTCGGAGGCGTGAGGACGCCGAGCTCGCGGTTTCCCAATTCCACAAAC
GTACCCTGGATGGTGCACCCATGAACGTCGAAATTCTGCCTAACGGGGCC
GACCCTTCCAAGCGAGGCATGGGGGTGGGCGGAGGAAGCGGACGGGCAGA
TGTCATTCGTGGTAGGGGCGCTCCCACTGTGAGTGGTGGTGGTGGTGGTG
GCGGTGGCGGTGGCGGCATGGGCAACAGTTGGACGGAAGCTCCTTCTGTT
GCTTTCTCCAACCCCCCGCCGCGGGCCAACACTGCTGCTGTTGGCCCTGG
TCCCACCCCTCGTGTGCCGCAGTCGCGCGTGACGGTGACGCAGCCCATGC
GCGCCCACGCTACTGTCCCTAATGTGCGCGCTGGTGTGTTCGGTACTGCG
CTCGATGATAGAGAAGCTCCTTCTGTTGCTTTCTCCAACCCCCCGCCGCG
GGCCAACACTGCTGCTGTTGGCCCTGGTCCCACCCCTCGTGTGCCGCAGT
CGCGCGTGACGGTGACGCAGCCCATGCGCGCCCACGCTACTGTCCCTAAT
GTGCGCGCTGGTGTGTTCGGTACTGCGCTCGATGATAGAGACGAAGACAT
GGACATGGTGGCCGCAGGCGTCGGCCGAGACCTGGACGATTATGTTGCCC
CCGGGATGAATGGCGGGTTTATGGGAGGGGGCGCAATGGGAAGTGGTGGC
ATGGGGACGAAGACATGGACATGGTGGCCGCAGGCGTCGGCCGAGACCTG
GACGATTATGTTGCCCCCGGGATGAATGGCGGGTTTATGGGAGGGGGCGC
AATGGGAAGTGGTGGCATGGGG back to top
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