prot_H-paniculata_contig6639.14515.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6639.14515.1
Unique Nameprot_H-paniculata_contig6639.14515.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length405
Homology
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 5.300e-83
Identity = 154/312 (49.36%), Postives = 203/312 (65.06%), Query Frame = 0
Query:   20 LFVATANGVAYEVSSCADMLLVDDSTVTAITVTSSEITCVEYTRFRVRNAMMISATVPQVTFSNIALKVLGELTVEPDVLFTGVNEQEKRGAVLHISDGATATFMGKAEFNENSNAQRELPDLPCEDVPEWPLSSTSFYNTRSYVSNDCTIRGWVPLNGGCIYNRGTLVFEDEARFDENYATTERDSGSNG--GAIANTATGTILFKGKLTMLNSYAESSFAGGKGYGGAIYNRGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGGAVFNMGGQVSFNAGSMFKSNSASSNGEGG 329
            L  A A  V Y V++CAD+  VDD+ VT++T+ +S   C EYTRFRVRNAM + ATVP V F N +LKVLGELTVEPDV+F GV +Q K G VL +++GATATFMG +EF++NS A +++  + C D        T      SY+             GG I+N+GTL FE +A F+ N   TE DS   G  GAI+NT +GTILFK KLTM ++ A+  F   +G GGAIYNRG++VVEGE+ F+ N+ S+GG I+    G++ FN  ATF +N A D  GG + N GG V+ NAGS+F+ N AS +G+GG
Sbjct:   12 LLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGD------GCTRIGRGLSYIVK----------KGGAIHNKGTLTFEGDATFERNEVHTE-DSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFF---EGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGG 303          
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 9.380e-81
Identity = 153/323 (47.37%), Postives = 203/323 (62.85%), Query Frame = 0
Query:    9 MWPFQLLATCALFVATANGVAYEVSSCADMLLVDDSTVTAITVTSSEITCVEYTRFRVRNAMMISATVPQVTFSNIALKVLGELTVEPDVLFTGVNEQEKRGAVLHISDGATATFMGKAEFNENSNAQRELPDLPCEDVPEWPLSSTSFYNTRSYVSNDCTIRGWVPLNGGCIYNRGTLVFEDEARFDENYATTERDSGSNG--GAIANTATGTILFKGKLTMLNSYAESSFAGGKGYGGAIYNRGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGGAVFNMGGQVSFNAGSMFKSNSASSNGEGG 329
            M P  L     L  A A  V Y V++CAD+  VDD+ VT +T+ +S   C EYTRF VRN+M + ATV  V F N +LKVLGELTVEPDV F GV +Q K G VL +++GAT+TFMG +EF++NS A ++L  + C D  E      S+                V   GG I+N+GTL FE +A F+ N   TE DS   G  GAI+NT +GTI FK KLTM ++ AE  F   +G GGAIYNRG+++V+GE+ F+ N+ S+GG I+    G + FNS+ATF +N A + RGG + N GG V+ NAGS+F+ N AS +G+GG
Sbjct:    1 MKPCSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSY----------------VVKKGGAIHNKGTLTFEGDATFERNAVHTE-DSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFF---EGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGG 303          
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.140e-56
Identity = 120/301 (39.87%), Postives = 164/301 (54.49%), Query Frame = 0
Query:   29 AYEVSSCADMLLVDDSTVTAITVTSSEITCVEYTRFRVRNAMMISATVPQVTFSNIALKVLGELTVEPDVLFTGVNEQEKRGAVLHISDGATATFMGKAEFNENSNAQRELPDLPCEDVPEWPLSSTSFYNTRSYVSNDCTIRGWVPLNGGCIYNRGTLVFEDEARFDENYATTERDSGSNGGAIANTATGTILFKGKLTMLNSYAESSFAGGKGYGGAIYNRGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGGAVFNMGGQVSFNAGSMFKSNSASSNGEGG 329
            A  V SC +   +D    T +T+T ++  C EYTR  +R+ M++ ++V +VTFSN ALKV G LTVEPDV+FTGV+  EK G VL +  GA   F G AEF++NS     + +   E++                              GG I+ +G+L FE +A F  N           GGAI+    G+I F GKLTM ++ A+  F G +G  GAI+NRGD+VV+GEA F  N G  GGAI   +  +LVFN   TF  N   D  GG + N+GG V+ NAGS+F    A ++G+GG
Sbjct:   23 AVNVGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEEILR---------------------------KGGAIHTKGSLTFEKDATFSGNLNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQG--GAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGG 294          
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 9.190e-40
Identity = 91/209 (43.54%), Postives = 129/209 (61.72%), Query Frame = 0
Query:  124 MGKAEFNENSNAQRELPDLPCEDVPEWPLSSTSFYNTRSYVSNDCTIRG--WVPLNGGCIYNRGTLVFEDEARFDENYATTERDSG-SNGGAIANTATGTILFKGKLTMLNSYAESSFAGGKGYGGAIYNRGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGGAVFNMGGQVSFNAGSMFKSNSASSNGEGG 329
            MG +EF+ NS A ++   + C D             TRS        RG  ++   GG I+N+GTL F+ +A F+ N A TE  +   NGGAI+NT +GTILFK KLTM ++ A+++FAG    GGAIYNRG+++VEG + F+ N  + GG IH    G++ FN +ATF +N A +  GG + N GG V+ NAGS+F+ N AS++G+GG
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGC-----------TRSE-------RGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAG---LGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGG 188          
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 3.060e-20
Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    9 MWPFQLLATCALFVATANGVAYEVSSCADMLLVDDSTVTAITVTSSEITCVEYTRFRVRNAMMISATVPQVTFSNIALKVLGELTVEPDVLFTGVNEQEKRGAVLHI 115
            M P  L    +L    A  V Y V++CAD+  VDD+ VT +T+ ++   C EYTRFRVRN+M + ATV  V F N +LKVLGELTVEPDV F GV +Q   G    +
Sbjct:    1 MKPVSLTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTTPSV 107          
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.460e-20
Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 0
Query:  243 GYGGAIYNRGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGGAVFNMGGQVSFNAGSMFKSNSASSNGEGGSXXXXXXXXXXXXXXXXXXXXXXRSGGSCGAMCTSSRTGATTYIFPSDPADISFEGNSSEDGGECDDIN 398
            G GGAIYNRG++ VEGE+ F+EN  S+GG I+    G + FNS+ATFF N A + RGG + N GG V+ NAGS+F+ N A++N +GG                             GA+ T     A+   FP D     FE NS++    C D++
Sbjct:   12 GLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDDGYPASVTTFPDDTV---FEDNSAD--AYCPDVH 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6639.14515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI5.300e-8349.36Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI9.380e-8147.37Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE1.140e-5639.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL58_ECTSI9.190e-4043.54Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG2_ECTSI3.060e-2048.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQG1_ECTSI4.460e-2038.46Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..404
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6639contigH-paniculata_contig6639:2138..10638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6639.14515.1mRNA_H-paniculata_contig6639.14515.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6639 1770..10709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6639.14515.1 ID=prot_H-paniculata_contig6639.14515.1|Name=mRNA_H-paniculata_contig6639.14515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=405bp
MKAVGSAMMWPFQLLATCALFVATANGVAYEVSSCADMLLVDDSTVTAIT
VTSSEITCVEYTRFRVRNAMMISATVPQVTFSNIALKVLGELTVEPDVLF
TGVNEQEKRGAVLHISDGATATFMGKAEFNENSNAQRELPDLPCEDVPEW
PLSSTSFYNTRSYVSNDCTIRGWVPLNGGCIYNRGTLVFEDEARFDENYA
TTERDSGSNGGAIANTATGTILFKGKLTMLNSYAESSFAGGKGYGGAIYN
RGDVVVEGEAFFAENSGSEGGAIHNRRTGSLVFNSLATFFDNGASDYRGG
AVFNMGGQVSFNAGSMFKSNSASSNGEGGSGGAIYNRNGLITFVGSTTFK
ENRSGGSCGAMCTSSRTGATTYIFPSDPADISFEGNSSEDGGECDDINGE
CYTG*
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