prot_H-paniculata_contig65763.14440.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65763.14440.1
Unique Nameprot_H-paniculata_contig65763.14440.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A087T1Z9_STEMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T1Z9_STEMI)

HSP 1 Score: 70.9 bits (172), Expect = 1.120e-12
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLG 70
            WN  L+DFL+  GL RS+   C YF      E N+++ +YVDDL+I G   +++EFK +I +RF ++DLG
Sbjct:  839 WNTCLNDFLIQYGLKRSSAKPCIYFCH----EKNIIIGIYVDDLLIVGNMAEINEFKGSIKKRFSVKDLG 904          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A1J3GXZ4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GXZ4_NOCCA)

HSP 1 Score: 62.8 bits (151), Expect = 8.780e-11
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKV-DEFKHNISQRFRMEDLG 70
            WN  LD  L G+   +   +S  Y  R +EG + L++A+YVDDL +TG   KV DEFK  +S +F M DLG
Sbjct:   34 WNTKLDQILKGMRFKKCAKESAVY--RKEEGGSLLIIAIYVDDLFVTGNNLKVIDEFKAGMSSKFEMSDLG 102          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A6D2I799_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I799_9BRAS)

HSP 1 Score: 64.7 bits (156), Expect = 1.620e-10
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREK-VDEFKHNISQRFRMEDLG 70
            WN  LD  L G+G  +   +S  Y  R  EG + L++A+YVDDL +TG   K +DEFK  +S +F M DLG
Sbjct:  133 WNTKLDQILKGLGFKKCAKESAVY--RKQEGGSLLIIAIYVDDLFVTGNTLKAIDEFKAGMSSKFEMSDLG 201          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A0J7KG03_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KG03_LASNI)

HSP 1 Score: 63.5 bits (153), Expect = 4.220e-10
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVD-EFKHNISQRFRMEDLG 70
            WN    D L  +G  RS  DSC YF RD++  + +++AVYVDDL+I    EKV    K  +SQ F M+DLG
Sbjct:  787 WNKKFHDTLTDMGFKRSQADSCVYFKRDNK--SLVIIAVYVDDLLILASNEKVKTSLKKKLSQTFDMKDLG 855          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A1B6EXU5_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6EXU5_9HEMI)

HSP 1 Score: 59.7 bits (143), Expect = 6.850e-10
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLG 70
            WN+T    L+ +GL+RS  D C YF++D      L + ++VDD ++TG   KV+E   N+ + F ++DLG
Sbjct:   27 WNDTFSKALIKLGLDRSQYDYCLYFAKD------LYLLLFVDDALVTGNLNKVNELISNLHEEFNVKDLG 90          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A8J5Y8L8_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y8L8_9ROSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.410e-9
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGR-REKVDEFKHNISQRFRMEDLG 70
            W   +D +LV +G NRS ++   Y  ++ E E  L+V++YVDDL++TG  ++K+ EFK  +   F M DLG
Sbjct:  141 WYARIDSYLVSLGFNRSVSEPTLYVKKN-EAEIQLIVSLYVDDLLVTGGDQDKLAEFKAKMKDMFEMSDLG 210          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A8J5YH47_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YH47_9ROSI)

HSP 1 Score: 60.8 bits (146), Expect = 3.480e-9
Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKV-DEFKHNISQRFRMEDLG 70
            W + +D +L+G+G  RS ++   Y  +++ G+T L+V+VYVDDL++TG  + +  +FK  + Q F M DLG
Sbjct:  101 WYSRIDSYLIGLGFERSLSEPTLYV-KEENGKTQLIVSVYVDDLLVTGGDQAMLVDFKTKMHQMFEMSDLG 170          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A2J7RGU0_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RGU0_9NEOP)

HSP 1 Score: 60.5 bits (145), Expect = 4.940e-9
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLG 70
            WN+T+    V  GL + T D C +F+        ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG
Sbjct:  139 WNDTITFIFVSFGLKQCTKDPCVFFND------RIIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLG 202          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A2J7PFT8_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PFT8_9NEOP)

HSP 1 Score: 60.5 bits (145), Expect = 5.160e-9
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLG 70
            WN+T+    V  GL + T D C +F+        ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG
Sbjct:  899 WNDTITFIFVSFGLKQCTKDPCVFFND------RIIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLG 962          
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Match: A0A2J7Q727_9NEOP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q727_9NEOP)

HSP 1 Score: 60.5 bits (145), Expect = 5.180e-9
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRREKVDEFKHNISQRFRMEDLG 70
            WN+T+    V  GL + T D C +F+        ++VA+YVDD++I G R+ V++ K  +SQR  ++DLG
Sbjct: 1002 WNDTITFIFVSFGLKQCTKDPCVFFND------RIIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLG 1065          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65763.14440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A087T1Z9_STEMI1.120e-1244.29Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3GXZ4_NOCCA8.780e-1145.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2I799_9BRAS1.620e-1045.07Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A0J7KG03_LASNI4.220e-1046.48Retrovirus-related pol polyprotein from transposon... [more]
A0A1B6EXU5_9HEMI6.850e-1038.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5Y8L8_9ROSI3.410e-940.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5YH47_9ROSI3.480e-939.44Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A2J7RGU0_9NEOP4.940e-938.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2J7PFT8_9NEOP5.160e-938.57Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
A0A2J7Q727_9NEOP5.180e-938.57Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..70
e-value: 1.1E-13
score: 51.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65763contigH-paniculata_contig65763:589..798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65763.14440.1mRNA_H-paniculata_contig65763.14440.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65763 589..798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65763.14440.1 ID=prot_H-paniculata_contig65763.14440.1|Name=mRNA_H-paniculata_contig65763.14440.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
WNNTLDDFLVGIGLNRSTTDSCFYFSRDDEGETNLLVAVYVDDLVITGRR
EKVDEFKHNISQRFRMEDLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2