prot_H-paniculata_contig6570.14432.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6570.14432.1
Unique Nameprot_H-paniculata_contig6570.14432.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
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BLAST of mRNA_H-paniculata_contig6570.14432.1 vs. uniprot
Match: A0A6H5KD18_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD18_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.110e-21
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0 
Query:   44 RDTLRKSRRVSRPLLKAMAVSLALLGLARLVLGDLLAETINPMDELLFGDDLTKLYSDKAAKPPREALPFPLDSDMMPGRTRIKGKGVQRSPRPMGEEDGQGE 146
            R +LRK+RR+SRP LKAMA  LALL +ARL LG +LA  I+P  ELLFGDD+  LYS       +  +PF  D+  +PGR ++KGKGVQR PRP GEE   GE
Sbjct:  285 RVSLRKARRLSRPFLKAMAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVDMPFAKDAQDVPGRKKMKGKGVQRQPRPDGEEGRGGE 387
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6570.14432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD18_9PHAE2.110e-2156.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6570contigH-paniculata_contig6570:1438..4431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6570.14432.1mRNA_H-paniculata_contig6570.14432.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6570 1057..4440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6570.14432.1 ID=prot_H-paniculata_contig6570.14432.1|Name=mRNA_H-paniculata_contig6570.14432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MVEVGEGSAGEVVAFSKWGTHSTIQLLLYFMFVLLISGARFSKRDTLRKS
RRVSRPLLKAMAVSLALLGLARLVLGDLLAETINPMDELLFGDDLTKLYS
DKAAKPPREALPFPLDSDMMPGRTRIKGKGVQRSPRPMGEEDGQGERGGV
HKGAGLLDIELDDGDEVELDYEELL*
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