prot_H-paniculata_contig6445.14261.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6445.14261.1
Unique Nameprot_H-paniculata_contig6445.14261.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length318
Homology
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BLAST of mRNA_H-paniculata_contig6445.14261.1 vs. uniprot
Match: A0A6H5K094_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K094_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.290e-48
Identity = 118/236 (50.00%), Postives = 142/236 (60.17%), Query Frame = 0 
Query:    1 MEQVFFRLHLRFVTTVTRLLPPKTRRILEYVTLANAFCLLLSLGWLHSHFVNPKG-QGSAVSCLPAALARAGVDPAHLHVLQIHIRTPLDEGPRGSTVS--SSALTPSPASSSLENHERHIVDASTGISSAASNGRGATIPPDPGPDLLAMQAQSIECATGDQGAEDSCSSSSSGSSTDFGTGRGETVSGDTGVATVAAGNLPSESLPPAVFYSMKMVTGKDAVGTLSGPGTLGIE 233
            MEQVFFRLH+RFVTTVTRLL PKTRR+LEYVTLANAF L+ SL WLH+ FVNPKG QGSAVSCLPAAL +AGVDPA LHVLQIHIR P D+           + ++    SS +++  R   +A   +S +  +  GA      G   L         ATG   +  + S    G++   G+              +    L S  L P +FYSMK+VTGKDAVGTLSGPGTLGIE
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGSQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQPPDDXXXXXXXXXXKNLMSFPDGSSRIDDSSRSGTNAEQQVSDSRRHSGGAAGDAGLGISGLGGGESGYASATGTAASACTGSGEEEGAAGTMGSXXXXXXXXXXXXXWLLPPRLDSPPLSPEIFYSMKLVTGKDAVGTLSGPGTLGIE 236
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BLAST of mRNA_H-paniculata_contig6445.14261.1 vs. uniprot
Match: D8LLK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK2_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.060e-38
Identity = 122/272 (44.85%), Postives = 134/272 (49.26%), Query Frame = 0 
Query:    1 MEQVFFRLHLRFVTTVTRLLPPKTRRILEYVTLANAFCLLLSLGWLHSHFVNPKG-QGSAVSCLPAALARAGVDPAHLHVLQIHIRTPLDEGPRGSTVSSSALTPSPASSSLENHERHIVDASTGIS----------------SAASNGRGATIPPDPGPDLLAMQAQSIECATGDQGAEDSCSSSSSGSSTDFGTGRGETVSGDTGVATVAAGNLPSES-------------LPPA---------VFYSMKMVTGKDAVGTLSGPGTLGIE 233
            MEQVFFRLH+RFVTTVTRLL PKTRR+LEYVTLANAF L+ SL WLH+ FVNPKG QGSAVSCLPAAL +AGVDPA LHVLQIHIR P D+                                                    +AA  G G +         L          TG   A  +C            TG GE V         AAG + SES             LPP          +FYSMK+VTGKDAVGTLSGPGTLGIE
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGRQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQPPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADAGLGMS--------GLGXXXXXXXSVTGTTAAT-AC------------TGSGEEVG--------AAGAIGSESXXXXXXXXXXXXLLPPRLDSPPQSPEIFYSMKLVTGKDAVGTLSGPGTLGIE 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6445.14261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K094_9PHAE1.290e-4850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLK2_ECTSI1.060e-3844.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6445contigH-paniculata_contig6445:3746..9119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6445.14261.1mRNA_H-paniculata_contig6445.14261.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6445 3693..9119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6445.14261.1 ID=prot_H-paniculata_contig6445.14261.1|Name=mRNA_H-paniculata_contig6445.14261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp
MEQVFFRLHLRFVTTVTRLLPPKTRRILEYVTLANAFCLLLSLGWLHSHF
VNPKGQGSAVSCLPAALARAGVDPAHLHVLQIHIRTPLDEGPRGSTVSSS
ALTPSPASSSLENHERHIVDASTGISSAASNGRGATIPPDPGPDLLAMQA
QSIECATGDQGAEDSCSSSSSGSSTDFGTGRGETVSGDTGVATVAAGNLP
SESLPPAVFYSMKMVTGKDAVGTLSGPGTLGIELRGGRGGGGAPAAAGKA
GKDGSADVCGTAEGGWIGSSGSGSDVCGAGGGRGIIGGSGEDRLSAVQTL
VNALSWGKGVTEVEREAV
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