prot_H-paniculata_contig6398.14202.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6398.14202.1
Unique Nameprot_H-paniculata_contig6398.14202.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.030e-33
Identity = 62/150 (41.33%), Postives = 100/150 (66.67%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHNPTERE 150
            +I  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  +++MD+G+RR     +G+ QGDG+ P LF + + PI+   ++ ++ LGV   AY+DD+ L + + TEE+V+A+  LV ELA +G+ +N AK+ A+PP  H  T+++
Sbjct:  677 IIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQ 826          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 3.200e-33
Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G RR      G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  229 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 381          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 3.310e-33
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 298          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.280e-33
Identity = 64/154 (41.56%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLV-LAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV+L AY+DD++ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 291          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 8.670e-33
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 659          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.810e-32
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L     T EN++ I  +V EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 206          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.680e-32
Identity = 61/153 (39.87%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC++AFN+ KR  I+ + A   P +  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R +++ LGV L AY+DD+ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  131 VVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 283          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.740e-32
Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTER 149
            ++  DC+NAFN+ KR AI+ + +   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L   + T EN++    LV EL  +G+ +N  K+ A+PP  H+  PTER
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTER 656          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 5.160e-32
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G+RR     +G+ QGDG+ P LFC  + PI+   R  ++ LGV L AY+DD+ L     T E ++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRL 685          
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 3.440e-31
Identity = 62/153 (40.52%), Postives = 92/153 (60.13%), Query Frame = 0
Query:    1 LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDTGKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLDDLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHN--PTEREI 151
            ++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+G+RR     +G+ QGDG+ P LF   + PI+   R  ++ LGV L AY+DD+ L     T EN++ I  LV EL  +G+ +N  K+ A+PP  H+  P ER +
Sbjct:   95 VVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6398.14202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.030e-3341.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE3.200e-3341.83Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JLG6_9PHAE3.310e-3341.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE6.280e-3341.56Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMQ2_9PHAE8.670e-3341.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE1.810e-3241.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE2.680e-3239.87Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE2.740e-3241.72Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE5.160e-3241.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE3.440e-3140.52Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 49..146
e-value: 1.7E-6
score: 29.9
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 60..141
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..139
e-value: 2.1E-15
score: 56.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..158
score: 14.718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6398contigH-paniculata_contig6398:12085..12558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6398.14202.1mRNA_H-paniculata_contig6398.14202.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6398 12085..12558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6398.14202.1 ID=prot_H-paniculata_contig6398.14202.1|Name=mRNA_H-paniculata_contig6398.14202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
LITLDCTNAFNSVKRAAILEEIAIRTPGLTPFVAKCYGEKPADIIFQMDT
GKRRKKSSNTGIHQGDGLVPALFCMPVGPILRNCRELFEALGVKLLAYLD
DLVLAMGERTEENVRAIHFLVQELAGIGVHINNAKTKAVPPMNHNPTERE
ISVPASMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom