prot_H-paniculata_contig6389.14194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6389.14194.1
Unique Name	prot_H-paniculata_contig6389.14194.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	590

Homology

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 8.340e-75
Identity = 144/195 (73.85%), Postives = 159/195 (81.54%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNH--FTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTEDDD--------PVLDTPLWKLADEVDGDGAGEDWMSREAG 185
            D+D NGHVDFITAASNLRA  YGIP ADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKL+QGA +  HKNGFVNLAAPF+AFSEPLEAEP+D   G G    FTIWDKV VDGA +LT RGL+ FL+ ERG AEVSMISY NAFLYASF+H + DD        PVLDTPLW+LA+ +D DG G+DWMSR+ G
Sbjct:  461 DDDLNGHVDFITAASNLRASNYGIPAADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLIQGAPITDHKNGFVNLAAPFVAFSEPLEAEPIDGASGGGGEGGFTIWDKVVVDGAADLTVRGLVEFLKSERGAAEVSMISYKNAFLYASFMHGDVDDEGEEGDPHPVLDTPLWQLAEALDTDG-GQDWMSRDGG 654

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A6H5KE41_9PHAE (UBA_e1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE41_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 8.100e-72
Identity = 142/205 (69.27%), Postives = 156/205 (76.10%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQ--------GASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNH--FTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTEDDD----------PVLDTPLWKLADEVDGDGAGEDWMSREAG 185
            D+D NGHVDFITAASNLRA  YGIP ADRLSTKRIAGKIVPAIATTTAVVSGLACVELLK+          GA +  HKNGFVNLAAPF+AFSEPLEAEP+D   G G    FTIWDKV VDGA +LT RGL+ FL+ ERG AEVSMISY NAFLYASF+H + DD          PVLDTPLW+LA+ +D DG G+DWMSR  G
Sbjct:   34 DDDLNGHVDFITAASNLRASNYGIPAADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKVTVKLDARSDGGAPITDHKNGFVNLAAPFVAFSEPLEAEPIDGASGGGGEGGFTIWDKVVVDGAADLTVRGLVEFLKSERGAAEVSMISYKNAFLYASFMHGDVDDEGEGEEDDPHPVLDTPLWQLAEALDTDG-GQDWMSRNVG 237

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S2URH7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URH7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 9.520e-39
Identity = 86/194 (44.33%), Postives = 121/194 (62.37%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVG-DGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGV----------AEVSMISYNNAFLYASFIHTEDDDPVLDTPLWKLADEVDGDGAGEDWMSRE 183
            D++ NGHV F TAASNLRA+ YGIP  D + T+RIAG+I+PA+ TTTA VS L C+EL+KLVQ A +  H+N ++NLA PF AF+ P+   P DE  G +G  FT+WD++ +  + +   +G L+  R  R V           ++S +SY    +YA+F+H EDDD VLD  +W L  E    G  +D+ + E
Sbjct:   24 DDESNGHVAFATAASNLRAISYGIPPVDAMETRRIAGRIIPAMITTTAFVSALPCLELIKLVQKAPLSLHRNAYINLALPFFAFTSPV---PADEYPGLNGKTFTLWDRIMIAESKKSLAKGGLTMKRFLRQVIKKAGGDKESTQISSVSYGPFMIYANFLH-EDDDSVLDKHMWDLLKEAITSGDDDDFFAEE 213

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A835Z5W8_9STRA (UBA_e1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.930e-38
Identity = 102/180 (56.67%), Postives = 119/180 (66.11%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLV-----QGA---SMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTE-DDDPVLDTPLWKLADEVD 171
            D+D NGHVDFI AASNLRA  YGIP ADRL TKR+AG+IVPAIATTTAVV+GLACVEL KL      +GA   S    KN FVNLA PF+AFSEP EAE      G    FT+WD+ +V GA +LT RGLL+ LR E G A  S +   +A LYASF+    +D+  L   +  LA E D
Sbjct: 1149 DDDANGHVDFIAAASNLRAAAYGIPPADRLRTKRVAGRIVPAIATTTAVVAGLACVELAKLAALTPRRGARVPSAAPFKNAFVNLAEPFVAFSEPAEAERAPWARGT---FTVWDRAAVRGARDLTLRGLLALLRREHGAARTS-VHAGDALLYASFLDPGGEDEAKLSARVVDLAAEGD 1324

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A1Z5KQS9_FISSO (UBA_e1_C domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQS9_FISSO)

HSP 1 Score: 157 bits (398), Expect = 7.540e-37
Identity = 81/176 (46.02%), Postives = 118/176 (67.05%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEV----------SMISYNNAFLYASFIHTEDDDPVLDTPLWKL 166
            D++ NGHV F+ AASNLRA+ YGIP  D++ T+R+AG IVPA+ TTTA+VSGL+C+ELLKL Q   +  ++N F+NLA PF AF+ PL AEPV   + +G  +TIWD++++  +     +G ++   + R ++E+          S +S     LYASF+H EDDD +LD PLW++
Sbjct:  908 DDETNGHVAFVNAASNLRAISYGIPPVDQMETRRVAGNIVPAMITTTALVSGLSCIELLKLSQNLPLRSYRNAFINLALPFFAFTVPLPAEPV--AIYNGRSYTIWDRLTIKESKVAAAKGGITMRSMMRRLSEIISGDSEKVDISSVSLGPYLLYASFLH-EDDDEILDKPLWEV 1080

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S3UWT7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWT7_HETAK)

HSP 1 Score: 143 bits (361), Expect = 1.880e-35
Identity = 82/152 (53.95%), Postives = 100/152 (65.79%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDG-AGELTPRGLLSFLRIERGVA-EVSMISYNNAFLYASFI 150
            D+  NGHV F+TAASNLRA  YGIP AD L+TKR+AGKIVPA+ATTTAVV+GL  +EL+KL QG  +E H+NGFVNLA PF+AFSEP  AE    G   G  FT+WD+  V   A  LT   L + L    G    VS + +    +YA F+
Sbjct:   98 DDAANGHVAFVTAASNLRARAYGIPEADELATKRVAGKIVPALATTTAVVAGLVGLELIKLAQGKPLEAHRNGFVNLAEPFLAFSEPAPAERTPIGAT-GRSFTLWDRFEVAAPAAALTVGALCARLEAAFGPGLRVSSLGWGGLLVYADFL 248

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: B8C120_THAPS (Ubiquitin activating enzyme (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C120_THAPS)

HSP 1 Score: 150 bits (379), Expect = 1.710e-34
Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGA-----GELTPRGLLSFLRIERGVA---EVSMISYNNAFLYASFIHTEDDDPVLDTPL 163
            D+D NGHV F+TAASNLRAL YGI  AD + T+R+AG+IVPA+ TTT +VS L+C+E +K+++G  +  H+N FVN+A PF AF+ PL AE V  GV   +H TIWD+V V G+     G +T R  L  ++   G     EV+ +SY    +YA+F+H+EDD+ +LD PL
Sbjct:  806 DDDNNGHVAFVTAASNLRALSYGIKPADTMETRRVAGRIVPAMITTTGLVSALSCLEFVKMLKGLPLNMHRNAFVNMALPFFAFTAPLPAEEV-AGVNRSSH-TIWDRVIVKGSSKSPVGAMTLRTFLDKVKRSSGFGDDFEVANLSYGPFMIYANFLHSEDDE-LLDAPL 973

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S0KY95_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KY95_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.750e-33
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVA----------EVSMISYNNAFLYASFIHTEDDDPVLDTPLWKL 166
            D++ NGHV F+TAASNLRAL YGI   D + T+RIAGKIVPA+ TTTA VS L+C+ELLK++Q A +  H+N F+NLA PF AF+ PL AE + +G+    H  +WD++ +    +   +G L+  R+ + V           E+S +S+    +YA+F+H ED+D +LD P  ++
Sbjct:  139 DDETNGHVAFVTAASNLRALCYGIAPVDAMETRRIAGKIVPAMITTTAFVSALSCIELLKVIQKAPLRHHRNAFINLALPFFAFTAPLPAEDM-QGLHGKTH-NLWDRLVLKEGEKAATKGGLTLRRLLQRVKKKAAADPDSIEISTVSFGPYMIYANFLH-EDEDEMLDKPFLQV 311

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S3V718_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V718_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.860e-33
Identity = 82/177 (46.33%), Postives = 116/177 (65.54%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAE-----------VSMISYNNAFLYASFIHTEDDDPVLDTPLWKL 166
            D+D NGHV F+TAASNLRA+ YGI   D++ T+++AGKIVPA+ TTTA VS L+C+E +KL Q A +  H+N F+NLA P  AF+ PL AE +D G+ DG+  TIWD + V  + +   +G ++  ++ R V             VS IS+    LYA+F+H EDDD +L+TP+ +L
Sbjct: 1026 DDDSNGHVAFVTAASNLRAIAYGITPVDQMETRKVAGKIVPAMITTTAFVSALSCIEFVKLTQKADLNLHRNAFINLALPLFAFTAPLPAEEID-GL-DGSSHTIWDIIVVKESKKNNAKGGMTMKQLIRKVVSKSNTSEVKEIAVSNISWGEYMLYANFLH-EDDDTLLNTPVQQL 1199

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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S4J7H0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7H0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.880e-33
Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 0

Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVA------------------EVSMISYNNAFLYASFIHTEDDDPVLDTPLWKLADEV 170
            D++ NGHV F+TA+SNLRAL YGI   D + T+R+AG+IVPA+ TTT +V+  +CVELLK++QG  +  HKN FVNLA PF AF+ PL AE +  G   G  +TIWD++ V    +   RG ++  R  R +                   E+  +SY    LYA+F+H E D+ +L   +W L  E 
Sbjct:  135 DDESNGHVPFVTASSNLRALCYGIKPVDAMETRRVAGRIVPAMITTTGLVAAASCVELLKMMQGVPLRSHKNAFVNLALPFFAFTSPLPAEEM--GGWRGETYTIWDRMEVREGRKSAERGGMTLSRFLRQLRKQIESDEGXXXXXXXXXMEICSVSYGPYMLYANFLH-EGDESILRKSVWDLVKEA 319

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPC4_ECTSI	8.340e-75	73.85	Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ...	[more]
A0A6H5KE41_9PHAE	8.100e-72	69.27	UBA_e1_C domain-containing protein n=1 Tax=Ectocar...	[more]
A0A7S2URH7_9STRA	9.520e-39	44.33	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A835Z5W8_9STRA	1.930e-38	56.67	UBA_e1_C domain-containing protein n=1 Tax=Tribone...	[more]
A0A1Z5KQS9_FISSO	7.540e-37	46.02	UBA_e1_C domain-containing protein n=1 Tax=Fistuli...	[more]
A0A7S3UWT7_HETAK	1.880e-35	53.95	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
B8C120_THAPS	1.710e-34	49.12	Ubiquitin activating enzyme (Fragment) n=1 Tax=Tha...	[more]
A0A7S0KY95_9STRA	1.750e-33	44.32	Hypothetical protein n=1 Tax=Asterionellopsis glac...	[more]
A0A7S3V718_9STRA	2.860e-33	46.33	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S4J7H0_9STRA	2.880e-33	42.02	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018965	Ubiquitin-activating enzyme E1, C-terminal	SMART	SM00985	UBA_e1_C_a_2	coord: 70..199 e-value: 1.9E-10 score: 50.7
IPR018965	Ubiquitin-activating enzyme E1, C-terminal	PFAM	PF09358	E1_UFD	coord: 106..173 e-value: 4.3E-9 score: 37.0
IPR019572	Ubiquitin-activating enzyme, catalytic cysteine domain	PFAM	PF10585	UBA_e1_thiolCys	coord: 1..33 e-value: 1.4E-10 score: 41.5
None	No IPR available	GENE3D	3.40.50.720		coord: 41..90 e-value: 8.6E-37 score: 128.9
None	No IPR available	PANTHER	PTHR10953:SF4	GH24511P	coord: 1..152
None	No IPR available	PANTHER	PTHR10953	UBIQUITIN-ACTIVATING ENZYME E1	coord: 1..152
IPR000594	THIF-type NAD/FAD binding fold	PFAM	PF00899	ThiF	coord: 34..90 e-value: 1.2E-7 score: 31.3
IPR042063	Ubiquitin-activating enzyme E1, SCCH domain	GENE3D	1.10.10.2660		coord: 1..40 e-value: 8.6E-37 score: 128.9
IPR035985	Ubiquitin-activating enzyme	SUPERFAMILY	69572	Activating enzymes of the ubiquitin-like proteins	coord: 1..152

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6389	contig	H-paniculata_contig6389:5502..10336 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6389.14194.1	mRNA_H-paniculata_contig6389.14194.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6389 5502..10336 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6389.14194.1 ID=prot_H-paniculata_contig6389.14194.1|Name=mRNA_H-paniculata_contig6389.14194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=590bp
DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVV
SGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDG
NHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFI
HTEDDDPVLDTPLWKLADEVDGDGAGEDWMSREAGPGDDHADSEATAPVS
LPPTTTTDDLKTPTSTATGSRSGSSGDNLGRKRGYGGSGLSNEGNCESYQ
LRTDLGFTSEIEVGDGPTGGVSERRGDTNGPWCDINIEFRPTSGERTASP
QSSAWSPSYVDEEDMLRVGADGDGSWGTGSVAAPPADESRLQGEFWSSNT
PVASTRHEPKSAGAPMTSIPAAGTDGVPNAAGEGSSIPVVDWFEEEFGGG
MMSAPVGSAGDIEEGEPSSTPLGAIAQDRSVHGHGGGRVGDVAEQQHPPW
SEIDPWQKKQGQFPPPSPRSHVGNAVPAGASSNPGDFQDAIGDGWFVRPS
LARSPPRQGEDPSMEGMCVDNSVREKYAEVGAPAAAQTGRADEEEPPSSH
RRRRRRYLDLEVFCDDENGEELRLPPVRLDLRSASRGTGA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018965	Ub-activating_enz_E1_C
IPR019572	UBA_E1_Cys
IPR000594	ThiF_NAD_FAD-bd
IPR042063	Ubi_acti_E1_SCCH
IPR035985	Ubiquitin-activating_enz