mRNA_H-paniculata_contig6389.14194.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6389.14194.1
Unique NamemRNA_H-paniculata_contig6389.14194.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 8.340e-75
Identity = 144/195 (73.85%), Postives = 159/195 (81.54%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNH--FTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTEDDD--------PVLDTPLWKLADEVDGDGAGEDWMSREAG 555
            D+D NGHVDFITAASNLRA  YGIP ADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKL+QGA +  HKNGFVNLAAPF+AFSEPLEAEP+D   G G    FTIWDKV VDGA +LT RGL+ FL+ ERG AEVSMISY NAFLYASF+H + DD        PVLDTPLW+LA+ +D DG G+DWMSR+ G
Sbjct:  461 DDDLNGHVDFITAASNLRASNYGIPAADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLIQGAPITDHKNGFVNLAAPFVAFSEPLEAEPIDGASGGGGEGGFTIWDKVVVDGAADLTVRGLVEFLKSERGAAEVSMISYKNAFLYASFMHGDVDDEGEEGDPHPVLDTPLWQLAEALDTDG-GQDWMSRDGG 654
[Close]
BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A6H5KE41_9PHAE (UBA_e1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE41_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 8.100e-72
Identity = 142/205 (69.27%), Postives = 156/205 (76.10%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQ--------GASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNH--FTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTEDDD----------PVLDTPLWKLADEVDGDGAGEDWMSREAG 555
            D+D NGHVDFITAASNLRA  YGIP ADRLSTKRIAGKIVPAIATTTAVVSGLACVELLK+          GA +  HKNGFVNLAAPF+AFSEPLEAEP+D   G G    FTIWDKV VDGA +LT RGL+ FL+ ERG AEVSMISY NAFLYASF+H + DD          PVLDTPLW+LA+ +D DG G+DWMSR  G
Sbjct:   34 DDDLNGHVDFITAASNLRASNYGIPAADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKVTVKLDARSDGGAPITDHKNGFVNLAAPFVAFSEPLEAEPIDGASGGGGEGGFTIWDKVVVDGAADLTVRGLVEFLKSERGAAEVSMISYKNAFLYASFMHGDVDDEGEGEEDDPHPVLDTPLWQLAEALDTDG-GQDWMSRNVG 237
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S2URH7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URH7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 9.520e-39
Identity = 86/194 (44.33%), Postives = 121/194 (62.37%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVG-DGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGV----------AEVSMISYNNAFLYASFIHTEDDDPVLDTPLWKLADEVDGDGAGEDWMSRE 549
            D++ NGHV F TAASNLRA+ YGIP  D + T+RIAG+I+PA+ TTTA VS L C+EL+KLVQ A +  H+N ++NLA PF AF+ P+   P DE  G +G  FT+WD++ +  + +   +G L+  R  R V           ++S +SY    +YA+F+H EDDD VLD  +W L  E    G  +D+ + E
Sbjct:   24 DDESNGHVAFATAASNLRAISYGIPPVDAMETRRIAGRIIPAMITTTAFVSALPCLELIKLVQKAPLSLHRNAYINLALPFFAFTSPV---PADEYPGLNGKTFTLWDRIMIAESKKSLAKGGLTMKRFLRQVIKKAGGDKESTQISSVSYGPFMIYANFLH-EDDDSVLDKHMWDLLKEAITSGDDDDFFAEE 213
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A835Z5W8_9STRA (UBA_e1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.930e-38
Identity = 102/180 (56.67%), Postives = 119/180 (66.11%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLV-----QGA---SMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFIHTE-DDDPVLDTPLWKLADEVD 513
            D+D NGHVDFI AASNLRA  YGIP ADRL TKR+AG+IVPAIATTTAVV+GLACVEL KL      +GA   S    KN FVNLA PF+AFSEP EAE      G    FT+WD+ +V GA +LT RGLL+ LR E G A  S +   +A LYASF+    +D+  L   +  LA E D
Sbjct: 1149 DDDANGHVDFIAAASNLRAAAYGIPPADRLRTKRVAGRIVPAIATTTAVVAGLACVELAKLAALTPRRGARVPSAAPFKNAFVNLAEPFVAFSEPAEAERAPWARGT---FTVWDRAAVRGARDLTLRGLLALLRREHGAARTS-VHAGDALLYASFLDPGGEDEAKLSARVVDLAAEGD 1324
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A1Z5KQS9_FISSO (UBA_e1_C domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQS9_FISSO)

HSP 1 Score: 157 bits (398), Expect = 7.540e-37
Identity = 81/176 (46.02%), Postives = 118/176 (67.05%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEV----------SMISYNNAFLYASFIHTEDDDPVLDTPLWKL 498
            D++ NGHV F+ AASNLRA+ YGIP  D++ T+R+AG IVPA+ TTTA+VSGL+C+ELLKL Q   +  ++N F+NLA PF AF+ PL AEPV   + +G  +TIWD++++  +     +G ++   + R ++E+          S +S     LYASF+H EDDD +LD PLW++
Sbjct:  908 DDETNGHVAFVNAASNLRAISYGIPPVDQMETRRVAGNIVPAMITTTALVSGLSCIELLKLSQNLPLRSYRNAFINLALPFFAFTVPLPAEPV--AIYNGRSYTIWDRLTIKESKVAAAKGGITMRSMMRRLSEIISGDSEKVDISSVSLGPYLLYASFLH-EDDDEILDKPLWEV 1080
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S3UWT7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWT7_HETAK)

HSP 1 Score: 143 bits (361), Expect = 1.880e-35
Identity = 82/152 (53.95%), Postives = 100/152 (65.79%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDG-AGELTPRGLLSFLRIERGVA-EVSMISYNNAFLYASFI 450
            D+  NGHV F+TAASNLRA  YGIP AD L+TKR+AGKIVPA+ATTTAVV+GL  +EL+KL QG  +E H+NGFVNLA PF+AFSEP  AE    G   G  FT+WD+  V   A  LT   L + L    G    VS + +    +YA F+
Sbjct:   98 DDAANGHVAFVTAASNLRARAYGIPEADELATKRVAGKIVPALATTTAVVAGLVGLELIKLAQGKPLEAHRNGFVNLAEPFLAFSEPAPAERTPIGAT-GRSFTLWDRFEVAAPAAALTVGALCARLEAAFGPGLRVSSLGWGGLLVYADFL 248
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: B8C120_THAPS (Ubiquitin activating enzyme (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C120_THAPS)

HSP 1 Score: 150 bits (379), Expect = 1.710e-34
Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGA-----GELTPRGLLSFLRIERGVA---EVSMISYNNAFLYASFIHTEDDDPVLDTPL 489
            D+D NGHV F+TAASNLRAL YGI  AD + T+R+AG+IVPA+ TTT +VS L+C+E +K+++G  +  H+N FVN+A PF AF+ PL AE V  GV   +H TIWD+V V G+     G +T R  L  ++   G     EV+ +SY    +YA+F+H+EDD+ +LD PL
Sbjct:  806 DDDNNGHVAFVTAASNLRALSYGIKPADTMETRRVAGRIVPAMITTTGLVSALSCLEFVKMLKGLPLNMHRNAFVNMALPFFAFTAPLPAEEV-AGVNRSSH-TIWDRVIVKGSSKSPVGAMTLRTFLDKVKRSSGFGDDFEVANLSYGPFMIYANFLHSEDDE-LLDAPL 973
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S0KY95_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KY95_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.750e-33
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVA----------EVSMISYNNAFLYASFIHTEDDDPVLDTPLWKL 498
            D++ NGHV F+TAASNLRAL YGI   D + T+RIAGKIVPA+ TTTA VS L+C+ELLK++Q A +  H+N F+NLA PF AF+ PL AE + +G+    H  +WD++ +    +   +G L+  R+ + V           E+S +S+    +YA+F+H ED+D +LD P  ++
Sbjct:  139 DDETNGHVAFVTAASNLRALCYGIAPVDAMETRRIAGKIVPAMITTTAFVSALSCIELLKVIQKAPLRHHRNAFINLALPFFAFTAPLPAEDM-QGLHGKTH-NLWDRLVLKEGEKAATKGGLTLRRLLQRVKKKAAADPDSIEISTVSFGPYMIYANFLH-EDEDEMLDKPFLQV 311
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BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S3V718_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V718_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.860e-33
Identity = 82/177 (46.33%), Postives = 116/177 (65.54%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAE-----------VSMISYNNAFLYASFIHTEDDDPVLDTPLWKL 498
            D+D NGHV F+TAASNLRA+ YGI   D++ T+++AGKIVPA+ TTTA VS L+C+E +KL Q A +  H+N F+NLA P  AF+ PL AE +D G+ DG+  TIWD + V  + +   +G ++  ++ R V             VS IS+    LYA+F+H EDDD +L+TP+ +L
Sbjct: 1026 DDDSNGHVAFVTAASNLRAIAYGITPVDQMETRKVAGKIVPAMITTTAFVSALSCIEFVKLTQKADLNLHRNAFINLALPLFAFTAPLPAEEID-GL-DGSSHTIWDIIVVKESKKNNAKGGMTMKQLIRKVVSKSNTSEVKEIAVSNISWGEYMLYANFLH-EDDDTLLNTPVQQL 1199
[Close]
BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Match: A0A7S4J7H0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7H0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.880e-33
Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 1 
Query:    1 DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVVSGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDGNHFTIWDKVSVDGAGELTPRGLLSFLRIERGVA------------------EVSMISYNNAFLYASFIHTEDDDPVLDTPLWKLADEV 510
            D++ NGHV F+TA+SNLRAL YGI   D + T+R+AG+IVPA+ TTT +V+  +CVELLK++QG  +  HKN FVNLA PF AF+ PL AE +  G   G  +TIWD++ V    +   RG ++  R  R +                   E+  +SY    LYA+F+H E D+ +L   +W L  E 
Sbjct:  135 DDESNGHVPFVTASSNLRALCYGIKPVDAMETRRVAGRIVPAMITTTGLVAAASCVELLKMMQGVPLRSHKNAFVNLALPFFAFTSPLPAEEM--GGWRGETYTIWDRMEVREGRKSAERGGMTLSRFLRQLRKQIESDEGXXXXXXXXXMEICSVSYGPYMLYANFLH-EGDESILRKSVWDLVKEA 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6389.14194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPC4_ECTSI8.340e-7573.85Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5KE41_9PHAE8.100e-7269.27UBA_e1_C domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2URH7_9STRA9.520e-3944.33Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A835Z5W8_9STRA1.930e-3856.67UBA_e1_C domain-containing protein n=1 Tax=Tribone... [more]
A0A1Z5KQS9_FISSO7.540e-3746.02UBA_e1_C domain-containing protein n=1 Tax=Fistuli... [more]
A0A7S3UWT7_HETAK1.880e-3553.95Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B8C120_THAPS1.710e-3449.12Ubiquitin activating enzyme (Fragment) n=1 Tax=Tha... [more]
A0A7S0KY95_9STRA1.750e-3344.32Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S3V718_9STRA2.860e-3346.33Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4J7H0_9STRA2.880e-3342.02Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6389contigH-paniculata_contig6389:5502..10336 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue8.9e-70
Seed eggNOG ortholog2880.D7FPC4
Preferred nameINTS1
KEGG koko:K03178,ko:K13138
KEGG Pathwayko04120,ko05012,map04120,map05012
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009301,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010466,GO:0010467,GO:0010605,GO:0010941,GO:0010951,GO:0016070,GO:0016073,GO:0016180,GO:0016591,GO:0018130,GO:0019222,GO:0019438,GO:0030162,GO:0030880,GO:0031123,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032039,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034472,GO:0034474,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040007,GO:0042795,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043628,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045861,GO:0046483,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0055029,GO:0060255,GO:0060548,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:2000116,GO:2000117
EggNOG free text desc.U2 snRNA 3'-end processing
EggNOG OGsCOG0476@1,KOG2012@2759,KOG4596@1,KOG4596@2759
Ec32 ortholog descriptionMolybdenum cofactor biosynthesis, MoeB
Ec32 orthologEc-15_003920.2
EC6.2.1.45
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041,ko04121,ko04147
Exons3
Model size1770
Cds size1770
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6389.14194.1prot_H-paniculata_contig6389.14194.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6389 5502..10336 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930739.303097-CDS-H-paniculata_contig6389:5501..68791622930739.303097-CDS-H-paniculata_contig6389:5501..6879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 5502..6879 -
1691481430.617609-CDS-H-paniculata_contig6389:5501..68791691481430.617609-CDS-H-paniculata_contig6389:5501..6879Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 5502..6879 -
1622930739.3214238-CDS-H-paniculata_contig6389:8366..85781622930739.3214238-CDS-H-paniculata_contig6389:8366..8578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 8367..8578 -
1691481430.639567-CDS-H-paniculata_contig6389:8366..85781691481430.639567-CDS-H-paniculata_contig6389:8366..8578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 8367..8578 -
1622930739.3380706-CDS-H-paniculata_contig6389:10156..103361622930739.3380706-CDS-H-paniculata_contig6389:10156..10336Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 10157..10336 -
1691481430.6513696-CDS-H-paniculata_contig6389:10156..103361691481430.6513696-CDS-H-paniculata_contig6389:10156..10336Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6389 10157..10336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6389.14194.1

>prot_H-paniculata_contig6389.14194.1 ID=prot_H-paniculata_contig6389.14194.1|Name=mRNA_H-paniculata_contig6389.14194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=590bp
DNDRNGHVDFITAASNLRALIYGIPVADRLSTKRIAGKIVPAIATTTAVV
SGLACVELLKLVQGASMEKHKNGFVNLAAPFIAFSEPLEAEPVDEGVGDG
NHFTIWDKVSVDGAGELTPRGLLSFLRIERGVAEVSMISYNNAFLYASFI
HTEDDDPVLDTPLWKLADEVDGDGAGEDWMSREAGPGDDHADSEATAPVS
LPPTTTTDDLKTPTSTATGSRSGSSGDNLGRKRGYGGSGLSNEGNCESYQ
LRTDLGFTSEIEVGDGPTGGVSERRGDTNGPWCDINIEFRPTSGERTASP
QSSAWSPSYVDEEDMLRVGADGDGSWGTGSVAAPPADESRLQGEFWSSNT
PVASTRHEPKSAGAPMTSIPAAGTDGVPNAAGEGSSIPVVDWFEEEFGGG
MMSAPVGSAGDIEEGEPSSTPLGAIAQDRSVHGHGGGRVGDVAEQQHPPW
SEIDPWQKKQGQFPPPSPRSHVGNAVPAGASSNPGDFQDAIGDGWFVRPS
LARSPPRQGEDPSMEGMCVDNSVREKYAEVGAPAAAQTGRADEEEPPSSH
RRRRRRYLDLEVFCDDENGEELRLPPVRLDLRSASRGTGA
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mRNA from alignment at H-paniculata_contig6389:5502..10336-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6389.14194.1 ID=mRNA_H-paniculata_contig6389.14194.1|Name=mRNA_H-paniculata_contig6389.14194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4835bp|location=Sequence derived from alignment at H-paniculata_contig6389:5502..10336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACAATGACCGAAACGGGCATGTCGACTTCATAACAGCTGCCTCCAACCT
CCGAGCGCTCATCTACGGTATCCCCGTTGCAGACCGCCTTTCCACTAAGC
GCATTGCCGGAAAAATTGTCCCGGCCATTGCCACCACCACTGCAGTCGTC
TCGGGACTGGCCTGCGTCGAGCTACTCAAGGTGCGCCGTTCACGCTCTGT
GTGCGTGTCTATGGGTTATATAAGATTCTGATATTGGTCGCGTTTCGCGA
CTGGAATGAAAAAAATGTGGGCGCTGACTGTGCGCAACACCTCGCATATG
CCGAGCGCCGGTGTTGAAATCTGCTCAAATGAATGCGAAGTACGACGGAA
CATGGGTGCAATTTTGTACACTGAGTAATGAGAAATGTACGCAACCTAAT
CTTGGTGTCAGGCGAAACATTGATAGTGAGAAATGACAAGCTGCACGATG
AGATAGAGGGCAATGATAATGCAGTGAGTACGGTGGGGGGTCGTCCGATC
GGCATGGGCGAACTTTTGTGCTGGGAAGAAGCATGCGGATGCGTTGACAT
ATGCTCGCGGTTGTGCGTCTTTGTATGAAGCGGTAGTTTGTTTCGCCTTT
CACGTATTATTTGTGACGTTCCCGAGTGTTGATCCTCGCTAGTACGTGGT
GTAATGTTGTGGTGTCTGAGGCTGAAATAGTGGTTGTGGCAAATTTCAAG
GTGTCACGTTAATATATATTTTCGAATTTTCTTTATGAAGTAGCTTGTCT
GGTTGCTGTCTTCACACCCTCCTTCCGCTGCCACGCTTACAGAACGCGCT
CGCTCCGGGCCTGGCTGCGAGTCGTCCTAGGATGAGCCGTTCACTTTTTA
AGATACTACTGCTTTGGCTGGTTGCACACAAATTTTCCGCATCAACTCTC
GTGTACCTATTTTTTGCTTCACCCGACCTTGTACGCGAAGCGGTTTGCTG
TTTTTCATGATGAACAGGTTTCAACCTCAGAAGAGGGTGAAATGGATAGA
TACAGATAGAGATGGCCGCTCCTCAGCAGGAGTGCGTCGCCGGGTGGAGA
AGGGAAAGGATGTTGCCGCTATTTTAGCAGGACGCCTGTATGACTCAGAA
ATTTCTTTCAGGATTATGAAACGTCCAAATTGCTCCGGTTCTCACCATGT
TTCGTACACGTACATGATTATATGCTTGGACTGTGTCCAATATTGCAATA
TATTGCTTTTTGTGGACTCTGTTCCCATCATCATTGATAGCGGGTCTTTC
GTATTCTCCAGGAGGCAATTGTGCGATATCGCAGGGTACTGTATTGATGT
TGAAACCTTGATCTAAACTAATGCCGAGCACAAGCAGTTGATCAAGATAT
TGTGGAAGATATGTAGAGCAGGGCAAATGCGTGTGAGACGCACCTTTGCG
AAAATGGCAAATCATCGATCAGTTGGCACTGCTCGCTTGTGTGTGCGCAA
TGCCTTCGTGCGCTAGGGGATGCGTGAGGAAATGACCCAACGCACAAGTA
CTTGGGGCATTCGACGCGTGCTCCCCACCTCGGAGCGTTCGGTGCGGTTG
ACTACTCATTCGCGGGTCACAGGGTGGTAGACAGCACACGTCCATTATTG
TTTAGCATTAACTTGTGCACACCTCCACGGCTTCATTTCGTATTGTGAAG
TTGTTCTATCAGTATGCTGTCATCTATTTCCTGTGACAAGAAACTCTTCG
AACCTCCCCCCCCCCCTCCTCCGCTGTTCGCAACCTGATAATCCCAATGG
GACAAAAGCTGGTACAAGGAGCCTCGATGGAGAAGCACAAAAATGGGTTC
GTGAACCTAGCCGCACCGTTCATCGCCTTCTCTGAGCCGCTCGAGGCAGA
GCCGGTGGATGAAGGGGTCGGAGACGGGAACCACTTTACCATCTGGGATA
AAGTATCGGTAGACGGCGCGGGTGAGCTAACGCCCCGCGGTTTGCTGAGC
TTCTTGAGGATCGAACGCGGGTGAGTGTGAGTGTGAGTGTGAGCTTGAGT
TGGACAGCGTCTATTTGTTTTTGTTTTTGTTTAGCTTCTTGTTCTGGAAA
ACGTTGTGTTTGGGTGTCTTGGGCAAGTGAGTGGATACGTCAACTTTGAG
TTGTTGGGTCAGTTTGTTTTTGGGGTTACTTCTACAGGAGTGGAGTACTG
TCAGTTGACACTTCTGGGTGGAGAAAAGGTAACGGTTGTGCTCCAGCGAG
AAAAAGGTACCGACGTAGAATGATCTCTTTGCGCGCGCCCGAGTACCAGG
TTTCGTTTACACTTACCAGTAGTTGTGTTGAGTTCGGCATGGAACTAGCG
AAGAGATTCACCTTTCCGCAAAAGTATAGGGAGCTTTTGCGGCCTTTCAC
TGCGCAATGCTTCCTCAAGTACGCGCAGCCATCAGACCTATAATAAACGA
AGAAAACTGTATCCACAAAATCACCAGCGTCGTTGAACACTAGGGCCGAA
TTGTGTGCGTCGAAATTAGAGGTTTCGAATAAATCAATCAGCGCGTGATT
TGGACTCGTACCCCGTCATAATTCTTCGAAAGCGTGTTTAGCTAACCAGA
ATTCTTCGACAAATTATGGGATCACTGTTTTGAGTAAAATCACAGATTTT
TTTAGCTTGCACCTTGGGGAGTTATTCTTCGCGTGTGGTGATTGATGAGC
GTACAACTAACCCCACATTTGACGATATGTTGCAGCAAGAATTGGTCCCG
CTGTAGCTACGCAGCAGGTTTTGCGATGGTAGTTCGGCCATGGCTACGCC
CGCACAGTGCCGGTTGTCCTCCAAATGCCTGTATTTGCTCACTGCTCGCT
TAGCGATCACGGCGAGGATGGAAACAAAACAGGGTGAAATAGCAAAGCAG
CAAGCGCGATGCAACACAGTTGGCGTTGAGCACGGGACACGCAGCTACAC
CGACGGAAGAGAACGCAGAACTGTTTCGACAGTCACTCATCACCCTCCGT
TGATTGCCTTGACCGCATGAAGAATATGGACGGTGTGGCTTTGTTGCTAT
TGCTAGAACCCATGGGATGTGTGCGGTGTCTTCCGTCAGCGCAGTTGTCT
GTCCCGCGCTTGCCTTTAACTGTGTTGCATGAATTGCGCTTGTAGTTTCG
CCGCCTCTCTCCGGTGATCTTATCTCCCGCGTACTTTTGTTCCGCAATTC
TTAAAATGTTCAAGTATAGGGTACCCTCGTTCTCCCCGCATTCATTGATT
GGGCCTTTTAGTTGTATGTTCTTCCACACAACGTGAACAATGGCTGCACC
CAGCTTATCGTGTTGGTCTACTAACGTAGTTCCACATTTGTACGCTACAG
TACAGGATCGGAGTAAATTTAGCGCTTCTGCCAGCTTTTTCTTGCTGCGA
GTTCTTAATTTTGATGTTTATACCCTTCTTCATATCACCCCCCCCACCCC
CACCCGCGCGCGCGCAACAAACGCCACGGACGTATACTTGCTATTACACC
ACACCAGAGTGGCAGAGGTCTCGATGATATCGTACAATAACGCGTTTTTG
TACGCGAGCTTCATCCACACGGAAGACGATGACCCCGTGTTGGACACACC
GCTGTGGAAACTGGCCGACGAGGTAGATGGGGATGGCGCCGGCGAAGACT
GGATGTCGCGCGAAGCGGGCCCTGGTGATGATCACGCCGATAGCGAGGCT
ACTGCTCCCGTATCGCTCCCCCCGACTACGACTACCGACGACTTAAAAAC
CCCGACGTCTACGGCTACCGGTAGCCGTAGTGGCAGCAGCGGGGACAATC
TTGGCCGGAAACGTGGATATGGCGGAAGCGGGCTGTCGAACGAGGGAAAC
TGCGAGAGCTATCAACTTCGCACCGATCTCGGTTTTACCTCGGAAATCGA
GGTCGGTGATGGTCCCACTGGTGGTGTAAGTGAACGGAGAGGGGATACAA
ACGGCCCATGGTGCGACATCAATATTGAGTTTCGCCCCACGTCGGGAGAA
CGGACGGCGTCGCCACAATCTTCAGCATGGTCACCGTCGTATGTGGACGA
GGAAGACATGCTTAGGGTTGGTGCGGACGGTGATGGGAGCTGGGGTACGG
GGTCTGTTGCTGCGCCGCCCGCAGACGAGTCGCGGCTTCAGGGTGAATTT
TGGAGCAGCAACACCCCCGTCGCCAGCACACGGCATGAACCCAAATCAGC
TGGGGCGCCGATGACGAGCATCCCCGCGGCAGGGACCGATGGTGTACCTA
ATGCTGCAGGAGAGGGGAGCTCCATCCCTGTTGTTGATTGGTTCGAAGAG
GAGTTTGGGGGAGGAATGATGTCGGCGCCGGTGGGCAGCGCCGGCGATAT
TGAGGAGGGAGAACCATCGTCCACGCCGTTGGGTGCCATAGCCCAGGATA
GATCAGTACATGGTCACGGCGGAGGCCGAGTAGGTGATGTAGCGGAGCAG
CAACACCCGCCCTGGAGCGAGATTGATCCTTGGCAGAAGAAACAGGGGCA
GTTCCCGCCGCCGTCGCCGCGATCTCATGTCGGGAATGCCGTACCTGCAG
GTGCTTCGAGCAATCCGGGAGACTTCCAGGATGCGATCGGGGATGGCTGG
TTCGTCAGACCTTCTTTGGCAAGGTCGCCGCCACGGCAAGGAGAAGATCC
ATCGATGGAAGGGATGTGTGTAGATAATAGTGTGCGAGAAAAGTATGCCG
AGGTAGGTGCGCCCGCAGCCGCACAGACCGGGCGCGCGGACGAAGAAGAG
CCGCCAAGCTCTCATCGGCGGCGGCGGCGGCGATATTTGGACCTGGAGGT
GTTCTGTGATGACGAAAACGGAGAGGAGTTGAGACTCCCTCCCGTTAGAC
TCGACCTGCGGAGTGCGAGTCGAGGGACCGGGGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig6389:5502..10336-

>mRNA_H-paniculata_contig6389.14194.1 ID=mRNA_H-paniculata_contig6389.14194.1|Name=mRNA_H-paniculata_contig6389.14194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3540bp|location=Sequence derived from alignment at H-paniculata_contig6389:5502..10336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACAATGACCGAAACGGGCATGTCGACTTCATAACAGCTGCCTCCAACCT
CCGAGCGCTCATCTACGGTATCCCCGTTGCAGACCGCCTTTCCACTAAGC
GCATTGCCGGAAAAATTGTCCCGGCCATTGCCACCACCACTGCAGTCGTC
TCGGGACTGGCCTGCGTCGAGCTACTCAAGGACAATGACCGAAACGGGCA
TGTCGACTTCATAACAGCTGCCTCCAACCTCCGAGCGCTCATCTACGGTA
TCCCCGTTGCAGACCGCCTTTCCACTAAGCGCATTGCCGGAAAAATTGTC
CCGGCCATTGCCACCACCACTGCAGTCGTCTCGGGACTGGCCTGCGTCGA
GCTACTCAAGCTGGTACAAGGAGCCTCGATGGAGAAGCACAAAAATGGGT
TCGTGAACCTAGCCGCACCGTTCATCGCCTTCTCTGAGCCGCTCGAGGCA
GAGCCGGTGGATGAAGGGGTCGGAGACGGGAACCACTTTACCATCTGGGA
TAAAGTATCGGTAGACGGCGCGGGTGAGCTAACGCCCCGCGGTTTGCTGA
GCTTCTTGAGGATCGAACGCGGCTGGTACAAGGAGCCTCGATGGAGAAGC
ACAAAAATGGGTTCGTGAACCTAGCCGCACCGTTCATCGCCTTCTCTGAG
CCGCTCGAGGCAGAGCCGGTGGATGAAGGGGTCGGAGACGGGAACCACTT
TACCATCTGGGATAAAGTATCGGTAGACGGCGCGGGTGAGCTAACGCCCC
GCGGTTTGCTGAGCTTCTTGAGGATCGAACGCGGAGTGGCAGAGGTCTCG
ATGATATCGTACAATAACGCGTTTTTGTACGCGAGCTTCATCCACACGGA
AGACGATGACCCCGTGTTGGACACACCGCTGTGGAAACTGGCCGACGAGG
TAGATGGGGATGGCGCCGGCGAAGACTGGATGTCGCGCGAAGCGGGCCCT
GGTGATGATCACGCCGATAGCGAGGCTACTGCTCCCGTATCGCTCCCCCC
GACTACGACTACCGACGACTTAAAAACCCCGACGTCTACGGCTACCGGTA
GCCGTAGTGGCAGCAGCGGGGACAATCTTGGCCGGAAACGTGGATATGGC
GGAAGCGGGCTGTCGAACGAGGGAAACTGCGAGAGCTATCAACTTCGCAC
CGATCTCGGTTTTACCTCGGAAATCGAGGTCGGTGATGGTCCCACTGGTG
GTGTAAGTGAACGGAGAGGGGATACAAACGGCCCATGGTGCGACATCAAT
ATTGAGTTTCGCCCCACGTCGGGAGAACGGACGGCGTCGCCACAATCTTC
AGCATGGTCACCGTCGTATGTGGACGAGGAAGACATGCTTAGGGTTGGTG
CGGACGGTGATGGGAGCTGGGGTACGGGGTCTGTTGCTGCGCCGCCCGCA
GACGAGTCGCGGCTTCAGGGTGAATTTTGGAGCAGCAACACCCCCGTCGC
CAGCACACGGCATGAACCCAAATCAGCTGGGGCGCCGATGACGAGCATCC
CCGCGGCAGGGACCGATGGTGTACCTAATGCTGCAGGAGAGGGGAGCTCC
ATCCCTGTTGTTGATTGGTTCGAAGAGGAGTTTGGGGGAGGAATGATGTC
GGCGCCGGTGGGCAGCGCCGGCGATATTGAGGAGGGAGAACCATCGTCCA
CGCCGTTGGGTGCCATAGCCCAGGATAGATCAGTACATGGTCACGGCGGA
GGCCGAGTAGGTGATGTAGCGGAGCAGCAACACCCGCCCTGGAGCGAGAT
TGATCCTTGGCAGAAGAAACAGGGGCAGTTCCCGCCGCCGTCGCCGCGAT
CTCATGTCGGGAATGCCGTACCTGCAGGTGCTTCGAGCAATCCGGGAGAC
TTCCAGGATGCGATCGGGGATGGCTGGTTCGTCAGACCTTCTTTGGCAAG
GTCGCCGCCACGGCAAGGAGAAGATCCATCGATGGAAGGGATGTGTGTAG
ATAATAGTGTGCGAGAAAAGTATGCCGAGGTAGGTGCGCCCGCAGCCGCA
CAGACCGGGCGCGCGGACGAAGAAGAGCCGCCAAGCTCTCATCGGCGGCG
GCGGCGGCGATATTTGGACCTGGAGGTGTTCTGTGATGACGAAAACGGAG
AGGAGTTGAGACTCCCTCCCGTTAGACTCGACCTGCGGAGTGCGAGTCGA
GGGACCGGGGCTAGTGGCAGAGGTCTCGATGATATCGTACAATAACGCGT
TTTTGTACGCGAGCTTCATCCACACGGAAGACGATGACCCCGTGTTGGAC
ACACCGCTGTGGAAACTGGCCGACGAGGTAGATGGGGATGGCGCCGGCGA
AGACTGGATGTCGCGCGAAGCGGGCCCTGGTGATGATCACGCCGATAGCG
AGGCTACTGCTCCCGTATCGCTCCCCCCGACTACGACTACCGACGACTTA
AAAACCCCGACGTCTACGGCTACCGGTAGCCGTAGTGGCAGCAGCGGGGA
CAATCTTGGCCGGAAACGTGGATATGGCGGAAGCGGGCTGTCGAACGAGG
GAAACTGCGAGAGCTATCAACTTCGCACCGATCTCGGTTTTACCTCGGAA
ATCGAGGTCGGTGATGGTCCCACTGGTGGTGTAAGTGAACGGAGAGGGGA
TACAAACGGCCCATGGTGCGACATCAATATTGAGTTTCGCCCCACGTCGG
GAGAACGGACGGCGTCGCCACAATCTTCAGCATGGTCACCGTCGTATGTG
GACGAGGAAGACATGCTTAGGGTTGGTGCGGACGGTGATGGGAGCTGGGG
TACGGGGTCTGTTGCTGCGCCGCCCGCAGACGAGTCGCGGCTTCAGGGTG
AATTTTGGAGCAGCAACACCCCCGTCGCCAGCACACGGCATGAACCCAAA
TCAGCTGGGGCGCCGATGACGAGCATCCCCGCGGCAGGGACCGATGGTGT
ACCTAATGCTGCAGGAGAGGGGAGCTCCATCCCTGTTGTTGATTGGTTCG
AAGAGGAGTTTGGGGGAGGAATGATGTCGGCGCCGGTGGGCAGCGCCGGC
GATATTGAGGAGGGAGAACCATCGTCCACGCCGTTGGGTGCCATAGCCCA
GGATAGATCAGTACATGGTCACGGCGGAGGCCGAGTAGGTGATGTAGCGG
AGCAGCAACACCCGCCCTGGAGCGAGATTGATCCTTGGCAGAAGAAACAG
GGGCAGTTCCCGCCGCCGTCGCCGCGATCTCATGTCGGGAATGCCGTACC
TGCAGGTGCTTCGAGCAATCCGGGAGACTTCCAGGATGCGATCGGGGATG
GCTGGTTCGTCAGACCTTCTTTGGCAAGGTCGCCGCCACGGCAAGGAGAA
GATCCATCGATGGAAGGGATGTGTGTAGATAATAGTGTGCGAGAAAAGTA
TGCCGAGGTAGGTGCGCCCGCAGCCGCACAGACCGGGCGCGCGGACGAAG
AAGAGCCGCCAAGCTCTCATCGGCGGCGGCGGCGGCGATATTTGGACCTG
GAGGTGTTCTGTGATGACGAAAACGGAGAGGAGTTGAGACTCCCTCCCGT
TAGACTCGACCTGCGGAGTGCGAGTCGAGGGACCGGGGCT
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