prot_H-paniculata_contig63240.14118.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63240.14118.1
Unique Nameprot_H-paniculata_contig63240.14118.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: UPI001AACADDF (secreted RxLR effector protein 161-like n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AACADDF)

HSP 1 Score: 73.6 bits (179), Expect = 4.150e-15
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKE 51
            WA D  DRKST+GY+F L+GGAISW S+KQ  V+ SSTEAEY+AA E  KE
Sbjct:  105 WAGDTNDRKSTSGYLFFLSGGAISWTSKKQLTVSLSSTEAEYIAAAEASKE 155          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL)

HSP 1 Score: 75.9 bits (185), Expect = 9.770e-15
Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKE 51
            WA D +DRKSTTGY+F+  GG ISWCSRKQ  VT SSTEAEYVA  E  KE
Sbjct: 1150 WAGDTKDRKSTTGYLFQYAGGMISWCSRKQDNVTLSSTEAEYVALAESCKE 1200          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 74.7 bits (182), Expect = 1.090e-14
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKE 51
            WA D  DR+ST+ YVFKL GGAISWCSRKQQ +  SSTEAEYVA     KE
Sbjct:  133 WAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKE 183          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 73.2 bits (178), Expect = 2.890e-14
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV 53
            +A DV+ RKSTTGYVF +  GAI+WCSR+QQ  + S+TEAEYVAA E  KE +
Sbjct:  109 YASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAI 161          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: RL161_PLAVT (Secreted RxLR effector protein 161 n=1 Tax=Plasmopara viticola TaxID=143451 RepID=RL161_PLAVT)

HSP 1 Score: 70.9 bits (172), Expect = 3.140e-14
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV 53
            WA DVE R+ST+GY+FKLNGG +SW S+KQ+ V  SSTE EY+A  E  +E V
Sbjct:   79 WAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAV 131          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A182H404_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H404_AEDAL)

HSP 1 Score: 71.2 bits (173), Expect = 4.570e-14
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKE 51
            WA D  DRKS TG+VF+L  G+ISW +RKQQ VT SSTEAEYVA  E  KE
Sbjct:   19 WAGDKADRKSNTGFVFQLGKGSISWTARKQQCVTLSSTEAEYVAISEASKE 69          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A2P4YAR8_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAR8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.610e-14
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV 53
            WA D+E R+ST+GY F +NGG ISW S+KQ+ V  SSTEAEY+A  E  +E +
Sbjct:   44 WAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAI 96          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A438BTS8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BTS8_VITVI)

HSP 1 Score: 70.5 bits (171), Expect = 5.310e-14
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV 53
            +A D++ RKSTTG+VF L G AISW S  Q++VT S+TEAEYVAA E GKE +
Sbjct:   78 FAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 130          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A392S5P5_9FABA (Uncharacterized protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392S5P5_9FABA)

HSP 1 Score: 68.9 bits (167), Expect = 5.760e-14
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAA 45
            +A D++DRKST+GYVFKL  GAISW S+KQ +VT S+TEAE+VAA
Sbjct:   47 YAGDLDDRKSTSGYVFKLGNGAISWSSKKQPIVTLSTTEAEFVAA 91          
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA)

HSP 1 Score: 73.6 bits (179), Expect = 6.330e-14
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV 53
            +A D++ RKST+G+VFKL  GAI+WCSR+Q+ ++ S+TEAEYVAA E  KE V
Sbjct:  496 YANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAV 548          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AACADDF4.150e-1566.67secreted RxLR effector protein 161-like n=2 Tax=Ra... [more]
A0A1W7R6H7_AEDAL9.770e-1570.59Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A060SU91_PYCCI1.090e-1468.63Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
A0A1Y1N3K4_PHOPY2.890e-1462.26Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
RL161_PLAVT3.140e-1460.38Secreted RxLR effector protein 161 n=1 Tax=Plasmop... [more]
A0A182H404_AEDAL4.570e-1466.67Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A2P4YAR8_9STRA4.610e-1456.60Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A438BTS8_VITVI5.310e-1462.26Retrovirus-related Pol polyprotein from transposon... [more]
A0A392S5P5_9FABA5.760e-1468.89Uncharacterized protein (Fragment) n=1 Tax=Trifoli... [more]
A0A139WJX6_TRICA6.330e-1460.38Copia protein-like Protein n=1 Tax=Tribolium casta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..45
NoneNo IPR availablePANTHERPTHR11439:SF242coord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63240contigH-paniculata_contig63240:1..162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63240.14118.1mRNA_H-paniculata_contig63240.14118.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63240 1..375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63240.14118.1 ID=prot_H-paniculata_contig63240.14118.1|Name=mRNA_H-paniculata_contig63240.14118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGK
ETV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like