mRNA_H-paniculata_contig63240.14118.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 124 bits (311), Expect = 9.500e-33 Identity = 64/125 (51.20%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
+A DV+ RKSTTGYVF + GAI+WCSR+QQ + S+TEAEYVAA E KE + LR LL I + L+ D +SAI L K + RTKHI VR+H I+E + G + ++YV++ DQLADI
Sbjct: 109 YASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADI 233
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: UPI001EE6E994 (secreted RxLR effector protein 161-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=UPI001EE6E994) HSP 1 Score: 124 bits (310), Expect = 1.370e-32 Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
+AED E R+STTGYVF+L GG I+W S++Q+LVT S+TEAEYV A +E + LR LL I + C +T +F D +SAI L + + RTKHI +R+H IRE + E L ++YVQT Q DI
Sbjct: 104 YAEDAETRRSTTGYVFQLAGGPITWASQRQKLVTLSTTEAEYVVASVTSREAIWLRKLLLDIEYPCADATVIFVDNQSAIRLVRNPEFHKRTKHIDIRYHYIREKVVEKILKIEYVQTKQQKGDI 228
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM) HSP 1 Score: 125 bits (315), Expect = 3.500e-32 Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
WA +V DR+S +G+VFK+ GAISW S+KQ SST+AEYVA KE V L L I C+ TTLF D +SA+ +++ + RTKHIG R H +RE + +G L LKY+ TGDQ+AD+
Sbjct: 261 WAGNVNDRRSISGFVFKVADGAISWSSKKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYLPTGDQMADV 385
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 125 bits (314), Expect = 4.220e-32 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
+A DV+DRKST+GYVF L GGA+SW S+KQ +VT S+TEAE+VAA + + LR +LG IG+ TTLF D S I LSK + R+KHI VR++ +R+ + E + LK+ T DQL+DI
Sbjct: 228 YAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDI 352
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 124 bits (312), Expect = 4.710e-32 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
+A D +DRKST+G+ F GGA+SW S+KQ +VT S+TEAEYVAA + V +R +L IGFG T LF D SAI LSK + R+KHI VR+H +RE + EG ++ +Y T +QLADI
Sbjct: 196 YAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADI 320
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 122 bits (307), Expect = 7.680e-32 Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSI------GFGCRRSTTLF-EDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
WA D DR+ST+ YVFKL GGAISWCSRKQQ + SSTEAEYVA KE + L LL + R L D +SA+ L+K S + RTKHI VR H IR+ + G LT++YV TGDQ+AD+
Sbjct: 133 WAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADV 264
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 121 bits (304), Expect = 2.290e-31 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIG-FGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
WA D+E R+ST+GYVF +NGG ISW S+KQ+ V SSTEAEY+A E KE V L+ LG +G + +FED + +I L+K + RTKHI +R+H +RE + G + L+Y T D LAD+
Sbjct: 110 WAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADM 235
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 118 bits (296), Expect = 2.400e-31 Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIG-FGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
WA D+E R+ST+GY F +NGG ISW S+KQ+ V SSTEAEY+A E +E V L+ L +G + ++ED + +I L+K + RTKHI +R+H +RE + +G + L+YV T D LAD+
Sbjct: 33 WAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADM 158
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: UPI000D3F8D86 (Ty1/Copia family ribonuclease HI n=1 Tax=Acinetobacter nosocomialis TaxID=106654 RepID=UPI000D3F8D86) HSP 1 Score: 118 bits (296), Expect = 5.370e-31 Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIG-FGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
WA D+E R+ST+GY F +NGG ISW S+KQ+ V SSTEAEY+A E +E + L+ L IG + + ++ED + +I L+K + RTKHI +R+H +RE + +G + L+Y T D LAD+
Sbjct: 37 WAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDMLADL 162
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 118 bits (296), Expect = 8.070e-31 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1 WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKETV*LRGLLGSIGFGCRRSTTLFEDTKSAITLSKGSGAYCRTKHIGVRWHGIREWIREGALTLKYVQTGDQLADI 375
+AED+E R+STTGYVF L GA++W +++Q++VT S+TEAEYVAA KE + LR LL + C R+T +F D +S + L + S + RTKHI VR H IRE + G + K V T Q AD+
Sbjct: 67 FAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADL 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63240.14118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig63240.14118.1 >prot_H-paniculata_contig63240.14118.1 ID=prot_H-paniculata_contig63240.14118.1|Name=mRNA_H-paniculata_contig63240.14118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp WAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEYVAAREPGKback to top mRNA from alignment at H-paniculata_contig63240:1..375+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig63240.14118.1 ID=mRNA_H-paniculata_contig63240.14118.1|Name=mRNA_H-paniculata_contig63240.14118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=375bp|location=Sequence derived from alignment at H-paniculata_contig63240:1..375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig63240:1..375+ >mRNA_H-paniculata_contig63240.14118.1 ID=mRNA_H-paniculata_contig63240.14118.1|Name=mRNA_H-paniculata_contig63240.14118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at H-paniculata_contig63240:1..375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |