prot_H-paniculata_contig5820.13426.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5820.13426.1
Unique Nameprot_H-paniculata_contig5820.13426.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
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BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Match: D8LMU3_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU3_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.520e-26
Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 0 
Query:  115 PGLL-HRVLPSLHLNARCLKCDRVGTVYCKGCEAHFCAKHDQRRHRFMLRKDGHQHEPLPGISYFR 179
            PGL+ H  LPSLHLNARC+KCD +G +YCKGCEAHFCA+HDQRRHRF+LRK+ H+H+ +PGISYFR
Sbjct:   44 PGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPGISYFR 109
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BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Match: A0A6H5JRH5_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.330e-25
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 0 
Query:  115 PGLL-HRVLPSLHLNARCLKCDRVGTVYCKGCEAHFCAKHDQRRHRFMLRKDGHQHEPLPGISYFR 179
            PGL+ H  LPSLHLNARC+KCD +G +YCKGCEAHFCA+HDQRRHRF+LRK+ H+H+ +P ISYFR
Sbjct:  107 PGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPDISYFR 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMU3_ECTSI1.520e-2674.24Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JRH5_9PHAE1.330e-2572.73Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5820contigH-paniculata_contig5820:5205..12880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5820.13426.1mRNA_H-paniculata_contig5820.13426.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5820 4621..12880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5820.13426.1 ID=prot_H-paniculata_contig5820.13426.1|Name=mRNA_H-paniculata_contig5820.13426.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
MTSEERRNGAKDKAYQGEEEKLVDAWGHTSSGDGTTDAVETPAAAEDAKA
AVDAGGGSSRSNVRRSLPVLSGVPSENPFSERTKPYISREFCSAGNSPAL
SPAGPPRPSSDSGQPGLLHRVLPSLHLNARCLKCDRVGTVYCKGCEAHFC
AKHDQRRHRFMLRKDGHQHEPLPGISYFR*
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