mRNA_H-paniculata_contig5820.13426.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5820.13426.1
Unique NamemRNA_H-paniculata_contig5820.13426.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Match: D8LMU3_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU3_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.590e-24
Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 3 
Query:  927 PGLL-HRVLPSLHLNARCLKCDRVGTVYCKGCEAHFCAKHDQRRHRFMLRKDGHQHEPLPGISYFR 1121
            PGL+ H  LPSLHLNARC+KCD +G +YCKGCEAHFCA+HDQRRHRF+LRK+ H+H+ +PGISYFR
Sbjct:   44 PGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPGISYFR 109
[Close]
BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Match: A0A6H5JRH5_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.130e-23
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 3 
Query:  927 PGLL-HRVLPSLHLNARCLKCDRVGTVYCKGCEAHFCAKHDQRRHRFMLRKDGHQHEPLPGISYFR 1121
            PGL+ H  LPSLHLNARC+KCD +G +YCKGCEAHFCA+HDQRRHRF+LRK+ H+H+ +P ISYFR
Sbjct:  107 PGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPDISYFR 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5820.13426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMU3_ECTSI2.590e-2474.24Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JRH5_9PHAE2.130e-2372.73Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5820contigH-paniculata_contig5820:4621..12880 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score117.5
Seed ortholog evalue6.6e-24
Seed eggNOG ortholog2880.D8LMU3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.palmitoyl-(protein) hydrolase activity
EggNOG OGsCOG1073@1,KOG1552@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1124
Cds size540
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5820.13426.1prot_H-paniculata_contig5820.13426.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5820 5205..12880 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930633.128372-UTR-H-paniculata_contig5820:4620..52041622930633.128372-UTR-H-paniculata_contig5820:4620..5204Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5820 4621..5204 +
1691481381.8132665-UTR-H-paniculata_contig5820:4620..52041691481381.8132665-UTR-H-paniculata_contig5820:4620..5204Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5820 4621..5204 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930633.1427822-CDS-H-paniculata_contig5820:5204..54491622930633.1427822-CDS-H-paniculata_contig5820:5204..5449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 5205..5449 +
1691481381.824635-CDS-H-paniculata_contig5820:5204..54491691481381.824635-CDS-H-paniculata_contig5820:5204..5449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 5205..5449 +
1622930633.1589773-CDS-H-paniculata_contig5820:10450..106341622930633.1589773-CDS-H-paniculata_contig5820:10450..10634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 10451..10634 +
1691481381.8345225-CDS-H-paniculata_contig5820:10450..106341691481381.8345225-CDS-H-paniculata_contig5820:10450..10634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 10451..10634 +
1622930633.1774197-CDS-H-paniculata_contig5820:12769..128801622930633.1774197-CDS-H-paniculata_contig5820:12769..12880Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 12770..12880 +
1691481381.8450751-CDS-H-paniculata_contig5820:12769..128801691481381.8450751-CDS-H-paniculata_contig5820:12769..12880Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5820 12770..12880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5820.13426.1

>prot_H-paniculata_contig5820.13426.1 ID=prot_H-paniculata_contig5820.13426.1|Name=mRNA_H-paniculata_contig5820.13426.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
MTSEERRNGAKDKAYQGEEEKLVDAWGHTSSGDGTTDAVETPAAAEDAKA
AVDAGGGSSRSNVRRSLPVLSGVPSENPFSERTKPYISREFCSAGNSPAL
SPAGPPRPSSDSGQPGLLHRVLPSLHLNARCLKCDRVGTVYCKGCEAHFC
AKHDQRRHRFMLRKDGHQHEPLPGISYFR*
back to top

mRNA from alignment at H-paniculata_contig5820:4621..12880+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5820.13426.1 ID=mRNA_H-paniculata_contig5820.13426.1|Name=mRNA_H-paniculata_contig5820.13426.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8260bp|location=Sequence derived from alignment at H-paniculata_contig5820:4621..12880+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGGGGCGAAGGGAGGTCATCATCTAGTTGTAGATATATATATCTATAT
ATCTATATCTATATATTGGTTGACGGTCCATACTTGTAACATCAACCAGC
GGAAGCTGTAGTCGTATCTTCAATTATAATTATTTGTCGCTCAAGATTAT
TATATATTTGCACTTCTCTAGCCCTTTCGATTTTTTGGCGGTTTCAATAA
TGCTGTAATTTGTGTCTTTCCCTTCTCTCTCGTCGTGAATATTACATGAG
TGTAGAGGGAAGGAGAAACGGCCCCGACTAGACTGAGGAAACGCGTGGGG
CGTCGGAGGGATTCGGACAATACAGCCTATCGGGTGTTCTATGGCGGAGT
GAAAGAGGCAAGGTCTCTCTTGTTCTTTTTCTCCGCCTACATCTTTGTAT
GGTGTTGCCAGGTCTCTTCTCTCTGATTTGATCCTTTCCGCATTTCCTTT
CGCGGATAGTCACAGACAAATAAATCAGTAGAAATAGCAAGTAGTACGTA
TATTGTTTTGCTGTCACAACACTCTGCGAGGCTTGCGAGAGAGAAAAAGG
GGGAGAGAGCAAGTGAGAGAGAAAAGAGGCCACCATGACGAGCGAAGAGA
GACGAAACGGAGCTAAGGACAAAGCGTATCAAGGAGAGGAGGAAAAACTG
GTGGATGCTTGGGGGCACACGAGCAGCGGTGACGGTACCACTGATGCTGT
TGAAACTCCTGCTGCTGCTGAAGATGCTAAAGCTGCTGTGGATGCTGGTG
GTGGTAGTAGCAGGAGCAACGTTCGAAGGTCCTTACCGGTGCTTTCGGGC
GTGCCGTCAGAAAACCCTTTCTCAGAACGGTGAGATTTTCAGGAATACGA
TAAAGGGATGGAGCAATACATTGGACGACGACAGCAAACAACCCCTCGGC
ATGTTGTGTATGTATATGTGTACCTTATGATGTCCTCCTTCTCTTGTGCA
TTTGCAAAGCGTGGCGGTTGTGTGTTGGGTTGTGTTTCAAGGAAGGGTCA
TTTTGAACATCACATCGGTGAAATTTTGTTTCATTCGACGGAATCTTGGG
CAATGTGATTCCAACTGGAGATAGTGTGATTTGGCCAGCCCGTAATTACC
TGTACGGCTGCTGGCAGAGCTCTAGAATATTAGTACCTAACCTAGGGGCG
AAACTCTCCTGGATCGTGAATTGCTGTGTTGCGCGTTGTATTGTGTCCTG
TGTGCTGGTGCACGAGCAGTTCCGATTGAGTTAACCATGTTTTTTTGGTG
GCGACCCTGATGAGAACCATGCCGCAGTTAAGACTTGGCCTCTCACACTC
CTCCCTTTTGCTATAAATATAGCATTCGTCGGTGCCCGCAATTATGACAT
ACGCTCGTGACCCCTTTCTTCCTTACAAAGCATGGTCCGCCCTAATCCCT
CTCTTACTTACAAGGCATGACCCCGCCCCAACAAGTCTCTATGCTGATAG
GCCCAGTGTATTGGCTATCAACAAAAATGCCAACAGACAATTGTTGTTTA
ATTAATGTTTTCCAACTGTTTTTTTTTTCTTCAGCCCTCCTAGCACACCA
CGAATGTCACTGTTTTCCCGTACAACTGTCTCTAGGCGGGCATTTGGTGA
ATATGGATCTGCAGTGCTTTGGGGTTCTTTTTTTGCTGGCTGACACACCA
CATGCCCATTATTCTTTATAACGCAGACACCAGTTGCAAATCAGCCCTCT
TCAGTCACAGCCGTCAACCGTCCCGTTGTTACAGCTACCGTCCTTGAGAA
GTCTTGATAATTCAGACATGAAATACAACGTACTGCTGCTTTTGTCTGCC
CCCCTGCGTTAGATAGAGGACCTTTCGCACCATGTCTTGTAGACAAAAAC
ACTGGTGGATTGATTTCACCGACTCTTCGTACGGTACAGTATTTGCTTGG
TGCAGTGTCCAGCAAACTGTGGTTGTACCTCGCGTAAAATGACTTGGAAG
GGTGTGACAGACCTCCATGCGTTCATGCCTGACGTCAAGTGTCGTTACGG
TTTTAGGGTACACTATGTGTGATCATGGGAGATATGACCAGTCTATGCAC
AGCAAGAGTTGGCGAGGACTTGAAGTGAAGGCTCACTACCCATTGACTGT
GTGTAGGCTTAGTCGGTTCGTGTGCTGTGAAGCGACGAAACAAGAACAGC
GGTGATTCCCCATGAAATTCCGCTCTAAGAAGGATTACACCGCCTTTATA
ATCATGCCGTACTTTTGTACCACGTCGTTTATACGTGGAAGTTAGGAGAC
CAGAACAAACGTTTGCTCTGTGCGTCGTCTCGCGTTTAGACGACGGTCCC
ACCCTACAACAACAGACAAGGACTGGAGGCTGTTGAGTATTTCGTGCGGG
GCTGGTGTCTCTGACACATCAACTTGGGCCTTTTAACATGAAGTGATTTC
TTCCATGGTTCATACCTCGAGTCCGTCTTCAGTGTCAGAACAAGCCGCTA
AAATTAATTTCCGCCCTCCAGAGGTTCTATTATTGATTACACTACGGTAC
CTGTGCTACTGTATGTTTATGTGCATCTGTTTTGTGTACTGGCGTCTTCG
TACGCCAGAGCCGCAGAGGCAGTTCATTCTCTGTACTCCTTTGGGGTAGC
AGTTGTTCTCCCCCCCTCCTACTACTACAGCAGGCGGACGCTTTCCGTTG
GAGCTGCATTTATTTCTTGGTTTTGAAATGTTGCGGCAAGGTTCTTTGTT
GATTTCAACACCCACGAAACACGCCACGACCCTGCTCCCAGGCTTCAAAA
TCATCTTCAGCAGGCATTATTAATTTCCCATTTACTCGGCTAATATCTGA
CGAACCTGGAACTGACTGTACTGTTGTCATGTATCATCACGTGTCCCAAC
TTGTTGACAACTGCCGCTCTACGGTATCATGAGTCTGCAGCTGAGGTTCC
ATAGGTGGTTCCTTTGGTGCGTGCTACACATGCAAGTGTTTGGAATCGAA
GAGGTGGTTCCATCTTGTGTCCCTCGTGCGCGTCATCCGATGATGGCGCA
CAACCTTTTTGCTAGAATTGAAAATAATAAATTCTGGCATTCGTTCTGAG
ATTTTATTTTGTTAATTCCGAACGTTCCGTGAACTTGCGGCTGGGGTACC
AGCGAGGGGCATCATGATGGCGCCACACGTTGCAGGTAAATAATCGATTT
AACCTTTGCTGCAAGCGTGCCCTCTTTCTCTCTCTGTGGATACTCTTTTC
TGGCATCGGTGGTACTGACACGCTCGGGGTGGCAGGTGCTCTCTAACTGA
ATAATATAAACTGTATTGCAGGTGCGATTAGTTGACCACCCTACCCTGAG
GCTTTGATGGAAGAAATGCGCATTTATAATGCTGTAGAACTGTCTGTACT
CTCTGTTTGAGTCTGTTTTATCTGTAGGTGTACCAACATACCTTGTTCAC
AGAGAGCCAGTTCGGTTTCAGACTACATAACGAGAGTTTCATTTGACTGT
CTGTGGTCATCCCCAGTTGGCCGAAGCTGCCTGTATGGTCTGCTTGCTGA
TGGGCTGTTTTGCGCCTGGCCTTGTCGTCTCTTGCCAGTATATCAACACA
TGTATGATGTATTTTATGTTTTTTGCAAAACCGTTACGGACAACATTATC
ATCAGTCAGTGTATTCACAATGCAGACAAGTATATTGTTCACTTGTCGGC
GGAACTGTGGAAGCTCCAAGGGCAAACGTTGCCTCGAGTAGCGGACGAAA
GGCATTCCTGTGTTGTCGTACACCACATACATTTTGTTCATTAAAGGAGG
ATCATGTCTGCATTTTTTCTGCTCCTCGTATTAGTGAAGGATGCCCCCTT
TCGCTTCAGAGCACACCAAGAGTAGGACACTGGAATTTATAGCAGATGGG
TATGCCGCAGCCAGTTTCCCACGCAGGCACAGCAAGCTAGCAATTCCTCC
TTGATCACCTCCATCTTGGACGTGGTTTTTATGTGGAACCCCCCGCTTTT
CGTTTAGTGGAATTCTGCAACTGCTGGTACTGGTAAACGCATATATCCAA
CCCCCGCTCGCTGTGCCACTCAGTGCTACTCGCATCTACCCGTTTGCTCG
GGGAGCAGAAGGGCGTGCCCACTATCCTCACAAATGAGTACTGGACATCA
GTTGGGAGAATATAATCCGCTGCAGATGAGTCACAATAATTATATTCAAT
GTAAGGCCAAAACTTCTTTTTTTTTCAACTATATGCAGCAGTAATGCTAG
TAGTATGAGTGTGCGTACCCAATACTGGTTGCACAATCATGGAGGTATTA
GGCAACCTTGGCATTTGAAACGAGTGCCTTCAGAGCGGACTCACGGGTGT
TTTAGAATTTCATAGACTGCCGTAGTTTTGTTATCTTGCAGCCAACAGTT
GCGGGTCTACGAGAGTTTATGAGATGATGAATCCTACAGACGAATGTAAT
ACAGTCAGCAGCGCTATTTAAGGACCTTTTTTTTATGGGTGGTTTCGGCT
GTGTTCAAGTGATCAAATACCATAATGGTATACTAAGAATTTTCCTGCTT
GTGTGACCTTCGGCGTCTACGTTAACACGAAGGGGCAAAGGATAGGGGCT
GCTTGTAGGATGTGTACATATTTAACCCTAACCCTAACTTCTTTTTTGTT
TCGGCCGATAATCCAAGCCATTGTTTAAACGGAGGACGCGTTTGCTCTGG
CACGTCTTTCGCGGAATCGCGAAATCCACACCCACAGCAAGCTGCAGTAA
ATTCTCAACGACAAGCCGGTCAAATACAACAGTACAAATCCGAAAATAGG
TCGTGTTCCATGAATTTCAGAAGAGAGCGGAGATTCTTGGAGGGTTGACG
TCGGAGTAATGTATTGAACAATTGCTTTGCTCTCGGTCGGCGTCGACAAG
TTCGAACAATTTCGGAGCGTTCGAGGTGGGTGAGCTTCCGTGTATAATTC
GTTGACAGCGCTATGCGTTTCAGTTCCAGGTGTCGCTTTGTTTCTGTCGG
GGTGTCTGTACAGCAGGCGTACGATGAGAGTCAAAATCGCGTACCCCCCT
TCCCCTCCAACTGCTTTTGCCTGACAGTGGAGGTGTAGCAACTGAAATGG
TGAGGTATGCCATCAATTAAGGGGTCACAGCAAATACTCCCTTCCCTCCA
AGAAAAAAAAAAATCAGTCGGGGTGGTGATTTTTTTGTCCCCTAAGTTTC
ATTTCCAGTGCCACATCATATCCCGTACTCTACGGAGCATGCGCGATTAA
GATATGGATTTTCGAGCAAGATTGTAGAAGCACACGACATTCCGGCTGGA
ATGTAGTTCCAGAAGTAGGTGCACCGCATAACGGCCATCAGGGGACAGGG
TGCAGTCGGTATAGATGATGAAAAATTGATCATGCGCGGGGTTGTACGAT
CGTCGATTTCTCCACACACATCGCGTGTACACTATCCCCGATAAAGGTAG
CGACACTAACTGTCTATTCTGCACTAGGTTTCCGTTACACGGTCAAATGG
ACAATTATTATCACACCCACTTGAAAAAAGTAGAGTGCGAAGGATACTGG
CTATGGTACGATGTGCATGGACAATAGATCAACTGGAAAGGATAGTGTGT
CTAGGCACACCATATTACACTAGAAACAAACTAGAAGCCCCGCTGCTAAA
CCATCATTTCGATTCCTTGATCCGAGAGTCCAAAAACGCTCATACATATT
AACTTCGACCCGAAAACTCCAGATCCCTCATCACTTTGATCCTCGTGAGT
AAATACAAGTACTTGTTCTGTGGTTAGGGGCAACCAACCCACTACCAACC
CCAAGCTCTAACCAACTCCTCACCATTCTTCCCGACCCCCCGCCCCCCCC
CACCCACTCCTCTGCGTTTCTTGCCAGCAGAACGAAACCGTACATTTCAC
GGGAATTTTGCTCCGCCGGAAATAGTCCGGCGCTTAGTCCGGCCGGGCCA
CCGCGTCCTTCGTCAGACAGCGGGCAACCTGGCCTCCTGCATAGAGTTTT
GCCTAGCCTGCACCTCAACGCGCGTTGCCTCAAGTGCGATCGTGTTGGTA
CGGTGTATTGCAAGGTATGGCGGGGGGTGGGTTGCGGGGGGGCAGCGCTG
CTGATAGCAATGAACATTAATGTACTAGCACAGAGTACACATCTTACTTG
CGAACCGCTAGTCGACCCGTTTTTTTCATCTTCGGGGCTGATTCTCTGTA
GTAAATTGAGCACACGTACATACTGATGTAGATTATATAGCCTGCAATCA
TGCCTCATTAATAATTAAAATGGGTTGAAGCGGAAATTCTTACGTTTCCA
TGCCTCGCTGTTGGATGTATGTTTCATTTACCAGTCACCACTTATTTTTC
TGCAGGTAAAAGTCGAATATCCATCTTCCTCGACCCCGAATTAGTCTCAG
GAGCTCTTTTACAAGCTGGTTCGTGTGGTTTCAATCGATGTGTTCCATTC
GACTTGTTTCGATATGACGGCACCCGCTAATCGTAAAACGCCTACATCGG
GGCTGAACATTTGTCATTTACTAGTCACATTTTTTTTGCAGCCAAAAGTT
ACATATTCATTTTCCTCGACCCCGAATTAGTCTCAGGAGCTCTTACACCA
GTTGGTTCGCGTGGGTTTTAGTCGATTTGGTGTTTGATTCGACTTGTTTC
GGTATACCCGCACCCGCTGAGCGTAACATTGATGTAGGGGCTTAACACAT
GTCAGTTACCATTCACCACTTTTTTTTTTTTTCAGCAAAAAGTAGGATAT
TCATTTTCCCCAACCCCGAATTGGTCCCAGGAGCCCTTCTAACAGGTTGG
TTCGCGTGCGGTTCAGTCGATTTGGTGTTCAAGTCGAGCTGTTTCTAGCT
GTATCGCGTTACGCTTGTACTGAAAATGGGTGATATCAGTCATTACTATG
TGATGATGTCAACATATGCGGCAAAAACGTTCATTTCAATCGATGCATTG
TTCAGAGTCTGTCGCGCATGGGACAGAAGCGAAGCTACATGATGTACTTC
GACGATCTGCCCTGTCGAGTATATGCAGGTCAATGTAGAGCTGCACCATT
TGTTTCACTCTGTATCAGTAGATCATGTGAGGAACGAAGAGGCAAGAATT
GCCCCGCATAGATACTCACGAATGCACGCCTCCAACAAAGCATAATCACG
CTGGCATCTGGGGAGGAATCCACTGCGAAGGATCAAAGTCAACGAATTCT
GTTGTAAATTCCTTGGTGCAGCCATCGTTAGAGATTCTAGGAGAGATGAT
TTGGGGGGTGATAACTGGTATCCCCCTAGCGACTGCTGCGGACCGTGCCT
GGAAGCAAAAGCGGTATACAAAACGGTAGCAGTAGCAGGCAATTTGGTGT
GGTGAGGATGGGGGACGTGATGGGTTGAGGGATGGGGACGGGGAACCGAA
GATCCGGTAGGTAGAACGGCATAACGCAAGAGTGGAGCTGTGTGCGTGGG
TGGAGGTCGTAGGGGTGAGGACGCAGGTGACGCGTGTGAGAGTACGTTGT
GGATACAAATCTGCCGACGACCAAATATTTTCATCTTTGGTTCATCAGAG
CTTTCGTTGTGAAGTAATTTTTGGGAGGGACAAGAGTGTGCTCAAAATTA
CCCAATAGTATAAATCAATTATGTGAGGTAATTTTTCTATATTCGTTTGG
CCTGAAAGCGTTCACAATACTGGCCACATGTAGAGGGGGGAGGGGGGGGG
TTCCATGCCATAGTTGAGCTATATCTCTGATGGTCGTATAATAGTTTCAC
TGTATCCATGTTGAGGTTATGCGGCCGACTTCAAACTTCGGTTGTTTACA
CTTATCAGCAAGATTAATCACTAAGGGAAGAGCTACCTGTGCGCCTCTTG
GCTGTCTGGTCATGCGTTGCTAGAAGTTTGAAACGATTACTCCTTGTTGT
ACTTTGTCAAGATTCGAAAAAAGAAAATAGGTTTGTCAAGGTAGATTGTC
TGCTTGCCCACTGGAAGTCTTGTACTTTTATTCCTCGTTTGCTGCCTGCA
CACGTGTGTATTGGCCTATTTATATCCGACGTACAATATGCTGCTGCTGC
TGCTACCGCTTGCTGCTGCTCTACATGTTTTTTTTTCTAGGGGTGGTTTG
GGATGATTCGCATCCACGCATGATACTTGCTTGGTACTTTTTTTAGTACC
GTAACGAACATCGTCAGACCTGCAAATGTAATAATTTATTTTGACTCAGG
GGTGTGAAGCACACTTTTGCGCGAAGCACGATCAGCGGCGACATCGCTTC
ATGCTGCGAAAGGACGGACACCAGCACGAGCCGCTCCCGGGGATATCGTA
CTTCCGGTAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5820:4621..12880+

>mRNA_H-paniculata_contig5820.13426.1 ID=mRNA_H-paniculata_contig5820.13426.1|Name=mRNA_H-paniculata_contig5820.13426.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig5820:4621..12880+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGAGCGAAGAGAGACGAAACGGAGCTAAGGACAAAGCGTATCAAGG
AGAGGAGGAAAAACTGGTGGATGCTTGGGGGCACACGAGCAGCGGTGACG
GTACCACTGATGCTGTTGAAACTCCTGCTGCTGCTGAAGATGCTAAAGCT
GCTGTGGATGCTGGTGGTGGTAGTAGCAGGAGCAACGTTCGAAGGTCCTT
ACCGGTGCTTTCGGGCGTGCCGTCAGAAAACCCTTTCTCAGAACGATGAC
GAGCGAAGAGAGACGAAACGGAGCTAAGGACAAAGCGTATCAAGGAGAGG
AGGAAAAACTGGTGGATGCTTGGGGGCACACGAGCAGCGGTGACGGTACC
ACTGATGCTGTTGAAACTCCTGCTGCTGCTGAAGATGCTAAAGCTGCTGT
GGATGCTGGTGGTGGTAGTAGCAGGAGCAACGTTCGAAGGTCCTTACCGG
TGCTTTCGGGCGTGCCGTCAGAAAACCCTTTCTCAGAACGAACGAAACCG
TACATTTCACGGGAATTTTGCTCCGCCGGAAATAGTCCGGCGCTTAGTCC
GGCCGGGCCACCGCGTCCTTCGTCAGACAGCGGGCAACCTGGCCTCCTGC
ATAGAGTTTTGCCTAGCCTGCACCTCAACGCGCGTTGCCTCAAGTGCGAT
CGTGTTGGTACGGTGTATTGCAAGAACGAAACCGTACATTTCACGGGAAT
TTTGCTCCGCCGGAAATAGTCCGGCGCTTAGTCCGGCCGGGCCACCGCGT
CCTTCGTCAGACAGCGGGCAACCTGGCCTCCTGCATAGAGTTTTGCCTAG
CCTGCACCTCAACGCGCGTTGCCTCAAGTGCGATCGTGTTGGTACGGTGT
ATTGCAAGGGGTGTGAAGCACACTTTTGCGCGAAGCACGATCAGCGGCGA
CATCGCTTCATGCTGCGAAAGGACGGACACCAGCACGAGCCGCTCCCGGG
GATATCGTACTTCCGGTAAGGGTGTGAAGCACACTTTTGCGCGAAGCACG
ATCAGCGGCGACATCGCTTCATGCTGCGAAAGGACGGACACCAGCACGAG
CCGCTCCCGGGGATATCGTACTTCCGGTAA
back to top