prot_H-paniculata_contig58119.13412.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig58119.13412.1
Unique Nameprot_H-paniculata_contig58119.13412.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 54.3 bits (129), Expect = 1.760e-7
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   26 EMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGIHSRKLRPLHPQRPAQKW 99
            E + L EN +W  V  PK++ VV +  ++KRKIGE+G+VE+YK R +A G       +S+K    H ++ A ++
Sbjct:    4 EFESLEENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQG-------YSQKFNMNHARKNASRY 70          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A151SIJ2_CAJCA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SIJ2_CAJCA)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-7
Identity = 23/71 (32.39%), Postives = 40/71 (56.34%), Query Frame = 0
Query:   17 EHWQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGIHSRKL 87
            E W++  +VE+Q + +NG W     PK +  +    +YK K+ E G+++K+K R +  G  Q  G+  RK+
Sbjct:   37 EKWKKAMDVEIQAIEKNGTWELTDLPKGQKTIGVKWVYKTKLNEKGEIDKFKARLVVKGYNQEHGVDYRKI 107          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 53.5 bits (127), Expect = 1.570e-6
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
Query:    3 EPKKSQGAQASPEWEHWQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            EP     A +S E + W+   E EM+ L  N ++  V  PKNK V+ +  I++RKI  DG VE+YK R +A    Q  G+
Sbjct:    5 EPSTINEALSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADGSVERYKARLVAQRFSQTHGL 84          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A4Y1RRK6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RRK6_PRUDU)

HSP 1 Score: 51.6 bits (122), Expect = 1.770e-6
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
Query:   24 EVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            +VE++ + +NG W  V  PK +  V    IYK K+ E G+V+KYK R +A G  Q  GI
Sbjct:    2 DVEIKSIEKNGTWELVDLPKGEKTVGVKWIYKTKLNEKGEVDKYKARLVAKGYTQEHGI 60          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A151T998_CAJCA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T998_CAJCA)

HSP 1 Score: 51.2 bits (121), Expect = 2.550e-6
Identity = 22/59 (37.29%), Postives = 35/59 (59.32%), Query Frame = 0
Query:   24 EVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            ++E++ + +NG W  + RPK   VV    +YK K+ E G+V+K+K R +  G  Q  GI
Sbjct:    2 DIEIEAIEKNGTWELIDRPKGAKVVGVKWVYKTKLNEKGEVDKFKARLVVKGYAQQYGI 60          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A151SRV2_CAJCA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SRV2_CAJCA)

HSP 1 Score: 50.8 bits (120), Expect = 3.220e-6
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0
Query:   19 WQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            W++  EVE++ + +N  W  V  PKN   +    IYK K+ E G+V+K+K R +A G  Q  GI
Sbjct:    7 WRQTMEVEIKAIEKNHTWELVELPKNAKKIGVKWIYKTKLNEHGEVDKFKARLVAKGYSQEHGI 70          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A2N5SCW9_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SCW9_9BASI)

HSP 1 Score: 53.5 bits (127), Expect = 4.420e-6
Identity = 26/82 (31.71%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    1 PVEPKKSQGAQASPEWEHWQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            P  PK  + A +SPE   W    ++E+  +++ G+WT V  P N  ++ T+ ++++K   +G + K+K R  A G+ Q +GI
Sbjct:  853 PSVPKTYRSAMSSPEAAEWSSAIKLELDAMVQLGVWTVVPIPSNHHLLGTIWVFRKKYDANGNLMKFKARLCAQGSAQQEGI 934          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A5N6NBX2_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NBX2_9ASTR)

HSP 1 Score: 52.8 bits (125), Expect = 7.730e-6
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   19 WQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGI 82
            WQ   + E+Q +++N  W  V  P+N+  +    IYK K+ E GQV+KYK R +  G  Q  GI
Sbjct:  210 WQDAMDCEIQSILKNDTWELVDAPQNQKTIGVKWIYKTKLNEKGQVDKYKARLVVKGYKQKYGI 273          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: Q10P73_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10P73_ORYSJ)

HSP 1 Score: 52.8 bits (125), Expect = 8.240e-6
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0
Query:    4 PKKSQGAQASPEWEHWQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKG 81
            PK    A ASP+ ++W+     EM  +I NG      RP     V    ++K+K+G DG +EKYK R +A G  Q +G
Sbjct:  686 PKSISEAYASPDADYWKEVVRSEMDSIIANGTLEVTERPYECKPVGCKWVFKKKLGHDGTIEKYKARLVAKGYTQKEG 763          
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Match: A0A5N6P988_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P988_9ASTR)

HSP 1 Score: 52.4 bits (124), Expect = 1.090e-5
Identity = 23/67 (34.33%), Postives = 37/67 (55.22%), Query Frame = 0
Query:   17 EHWQREEEVEMQGLIENGIWTQVGRPKNKLVVSTMMIYKRKIGEDGQVEKYKCRQIANGNCQIKGIH 83
            E W +  E E++ +  NG W  V  P+  + +    IYK K+ E G+++K+K R +  G  Q KGI+
Sbjct:  258 EKWMQAMEAEIKAIERNGTWELVDLPEGSIPIGVKWIYKTKLNEKGEIDKFKARLVVKGYAQQKGIN 324          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58119.13412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7TFD5_AMPQE1.760e-737.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151SIJ2_CAJCA5.100e-732.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1X7VXK3_AMPQE1.570e-638.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y1RRK6_PRUDU1.770e-642.37Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A151T998_CAJCA2.550e-637.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151SRV2_CAJCA3.220e-639.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N5SCW9_9BASI4.420e-631.71Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6NBX2_9ASTR7.730e-639.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q10P73_ORYSJ8.240e-637.18Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A5N6P988_9ASTR1.090e-534.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig58119contigH-paniculata_contig58119:690..986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig58119.13412.1mRNA_H-paniculata_contig58119.13412.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig58119 690..986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig58119.13412.1 ID=prot_H-paniculata_contig58119.13412.1|Name=mRNA_H-paniculata_contig58119.13412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
PVEPKKSQGAQASPEWEHWQREEEVEMQGLIENGIWTQVGRPKNKLVVST
MMIYKRKIGEDGQVEKYKCRQIANGNCQIKGIHSRKLRPLHPQRPAQKW
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