prot_H-paniculata_contig5775.13363.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5775.13363.1
Unique Nameprot_H-paniculata_contig5775.13363.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length234
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5775.13363.1 vs. uniprot
Match: D7FR40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR40_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.570e-59
Identity = 118/196 (60.20%), Postives = 138/196 (70.41%), Query Frame = 0 
Query:    1 MTRSTEPKDTPYSGLPANWRAPLQRGDSVKSDEEPATVQQEERRIDMDG-GRIELQEVRTSAQVLEEVQRVGIGGVGDRRVLRKPDAPPDIGRFQTDSQRRRSLPLSKLKRVKPKRRRLIDEEEGELRPLVAKTDRESVLRGEDYWIDYREVDEKAARKEARRKAPSPDQFAQSKMRAEIVNPYKQNWILAISLGI 195
            M  S E + TPYS LPA+WRAPL   +      E     QEE  ++ +G G  E   +RT A+VL+E  RV       R   R   APP +   QT++QRRR+LPLSKLKRVKPK+R   +EEEGE+RPLV KTDRESVLRGEDYWIDYREVD K A +EA+ KAP+PDQFAQSKM+AEIVNPYKQNWILAISL I
Sbjct:   71 MALSEEAEATPYSELPADWRAPLPPREFKPKKGET----QEEEGVEGEGVGGAEGDGLRTPAEVLQEATRV----TPKRMQGRMAQAPPGLESLQTENQRRRALPLSKLKRVKPKKRAAKEEEEGEIRPLVLKTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAISLAI 258
[Close]
BLAST of mRNA_H-paniculata_contig5775.13363.1 vs. uniprot
Match: K0S2D5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2D5_THAOC)

HSP 1 Score: 54.3 bits (129), Expect = 6.530e-6
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:  135 RESVLRGEDYWIDYREVDEKAARKEARRKAPSPDQFAQSKMRAEIVNPYKQNWILAISLGI 195
            R++V +G DYWID  E+++  AR+    K     + +Q K++AEIV PYKQNWI   SL I
Sbjct:   45 RDAVEQGLDYWIDEEEINKSKARESRPAKTSKRSRMSQDKLKAEIVAPYKQNWIGYFSLTI 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5775.13363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR40_ECTSI1.570e-5960.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0S2D5_THAOC6.530e-645.90Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5775contigH-paniculata_contig5775:3213..5643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5775.13363.1mRNA_H-paniculata_contig5775.13363.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5775 1676..5731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5775.13363.1 ID=prot_H-paniculata_contig5775.13363.1|Name=mRNA_H-paniculata_contig5775.13363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
MTRSTEPKDTPYSGLPANWRAPLQRGDSVKSDEEPATVQQEERRIDMDGG
RIELQEVRTSAQVLEEVQRVGIGGVGDRRVLRKPDAPPDIGRFQTDSQRR
RSLPLSKLKRVKPKRRRLIDEEEGELRPLVAKTDRESVLRGEDYWIDYRE
VDEKAARKEARRKAPSPDQFAQSKMRAEIVNPYKQNWILAISLGISECTT
KSVRANLSRSFLSPSDVSEVVAVTPTSAYLVGL*
back to top