prot_H-paniculata_contig57565.13326.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V1HEX2_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella zimbabwensis TaxID=268475 RepID=A0A0V1HEX2_9BILA) HSP 1 Score: 84.7 bits (208), Expect = 4.290e-15 Identity = 66/235 (28.09%), Postives = 110/235 (46.81%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVA-ESRVCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKM--LVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R T + L++ + +S+LP EY + P+ LL ER+R + T V V +K+NV + R CF+C+ +GHL NC + K G S F + F + C W+ADSGA+ HMT + E + D+ T + V + NG+ +P+ G+G + V++K + +++ + V +VP L NLFS++ ++GF +G
Sbjct: 21 RLTATQLPDLLLMCRIMSTLPQEYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKADSKENVKKDKRKCFKCHRIGHLAKNCTMK---TVKNAGQSRQS------FGGETFLCYRTEDNRNTCR-VWLADSGASQHMTRNKEYLADFVTFPQPVNVKIGNGDAIPVYGWGTVNFKVFIKGKWILNRMEV--VWYVPKLGLNLFSIEKAAEKGFNFTANVDG 243
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V0WE00_9BILA (Copia protein n=4 Tax=Trichinella sp. T6 TaxID=92179 RepID=A0A0V0WE00_9BILA) HSP 1 Score: 84.3 bits (207), Expect = 6.280e-15 Identity = 65/233 (27.90%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESR-VCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R GT + L++++ +S+LP +Y + P+ LL ER+R + T V V K+NV + R CF+C+ +GHL NC + + G + S F + F + C W+ADSGA+ HMT + E + D+ T + V V NG+ +P G+G + + +G+ + V +VP L NLFS+ ++GF G
Sbjct: 152 RLTGTQLPDLLLMSRIMSTLPQDYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKTNTKENVKKDRRKCFKCHRIGHLAKNCTMK---TVRNAGQSQQS------FGGESFFCYHAEDNRNTCR-MWLADSGASQHMTRNKEYLSDFVTFPKPVNVKVGNGDAIPAYGHGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKATEKGFNFTANAAG 374
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: Q967L5_AEDAE (Uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q967L5_AEDAE) HSP 1 Score: 84.7 bits (208), Expect = 6.800e-15 Identity = 72/276 (26.09%), Postives = 123/276 (44.57%), Query Frame = 0
Query: 2 LKYSRGQDPDEFWVELEKVQTHARSLGTDIASELVINKFLSSLPSEYVFV--------RDHLRMEPM---LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESRVCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSS-------DGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK-MLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEGAAIALPNGN 258
+ S D ++ E++ + + GT + ++ I L SLP + + +D + +E + L+ E +R + RD + + ++T V E+RVCF C + GHL+ NC +++ K + SS P S R I V + W+ DSGA+AHMT +E ++T+A+G+ I G G +L + E+ + +S V +VPGL TNL S++ + ++ V +G I P GN
Sbjct: 108 INLSERGDLEQHLFEVDDLFDRLDAAGTTLDADTKICLLLRSLPPSFDGLVTALDSRSQDDITLEVVKSKLMDEFLRRLERDGHPVKKEKAMKTAV-----TKTGETRVCFYCKKPGHLQRNC-RKLLEAKKEENNTSSSGTKPKKSDSVKAKAVHSDTRGIAFVVNGENARS-WIIDSGASAHMTCDKSFFITFEESCGGYITLADGKKTQILGEGAGVLHGIDGDDEVIRIDISGVKYVPGLSTNLISVEKLAQKKLDVSFNSDGCRIIDPKGN 376
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V1B5K0_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Trichinella TaxID=6333 RepID=A0A0V1B5K0_TRISP) HSP 1 Score: 84.3 bits (207), Expect = 9.520e-15 Identity = 65/233 (27.90%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESR-VCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R GT + L++++ +S+LP +Y + P+ LL ER+R + T V V K+NV + R CF+C+ +GHL NC + + G + S F + F + C W+ADSGA+ HMT + E + D+ T + V V NG+ +P G+G + + +G+ + V +VP L NLFS+ ++GF G
Sbjct: 152 RLTGTQLPDLLLMSRIMSTLPQDYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKTNTKENVKKDRRKCFKCHRIGHLAKNCTMK---TVRNAGQSQQS------FGGESFFCYHAEDNRNTCR-MWLADSGASQHMTRNKEYLSDFVTFPKPVNVKVGNGDAIPAYGHGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKATEKGFNFTANAAG 374
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V1L945_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1L945_9BILA) HSP 1 Score: 84.3 bits (207), Expect = 9.640e-15 Identity = 66/233 (28.33%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESR-VCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R GT + L++++ +S+LP +Y + P+ LL ER+R + T V V K+NV + R CF+C+ +GHL NC + + G + S F + F + C W+ADSGA+ HMT + E + D+ T + V V NG+T+P G G + + +G+ + V +VP L NLFS+ ++GF G
Sbjct: 163 RLTGTQLPDLLLMSRIMSTLPQDYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKTDTKENVKKDRRKCFKCHRIGHLAKNCTMK---TVRNAGQSQQS------FGGESFFCYHAEDNRNTCR-MWLADSGASQHMTRNKEYLSDFVTFPKPVNVKVGNGDTIPAYGRGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKATEKGFNFTANAAG 385
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V0TK25_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Trichinella TaxID=6333 RepID=A0A0V0TK25_9BILA) HSP 1 Score: 84.0 bits (206), Expect = 1.310e-14 Identity = 65/233 (27.90%), Postives = 105/233 (45.06%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESR-VCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R GT + L++++ +S+LP +Y + P+ LL ER+R + T V V K+NV + R CF+C+ +GHL NC + + G + S F + F + C W+ADSGA+ HMT + E + D+ T + V V NG+ +P G+G + + +G+ + V +VP L NLFS+ ++GF G
Sbjct: 945 RLTGTQLPDLLLMSRIMSTLPQDYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKTDTKENVKKDRRKCFKCHRIGHLAKNCTMK---TVRNAGQSQQS------FGGESFFCYHAEDNRNTCR-MWLADSGASQHMTRNKEYLSDFVTFPKPVNVKVGNGDAIPAYGHGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKATEKGFNFTANAAG 1167
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V1M1K0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Trichinella TaxID=6333 RepID=A0A0V1M1K0_9BILA) HSP 1 Score: 81.6 bits (200), Expect = 7.590e-14 Identity = 67/233 (28.76%), Postives = 106/233 (45.49%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVA-ESRVCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R GT + L++++ +S+LP EY + P+ LL ER+R + T V V +K+NV + R CF+C+ +GHL NC + K G S + F +R D + C W+ADSGA+ HMT + E + D+ T + V + NG+ +P G G + + +G+ + V +VP L NLFS+ +GF +G
Sbjct: 152 RLTGTQLPDLLLMSRIMSTLPQEYFEFKTVWESVPVGERSVNLLIERLRLIEMRLPEKTTDSSVALTVKADSKENVKKDKRRCFKCHRIGHLAKNCTMK---TVKNAGQSRQSFGGGSFFC---YRAEDNR---NTCR-MWLADSGASQHMTHNKEYLADFVTFPQPVNVKIRNGDAIPAYGRGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKAADKGFYFTANADG 374
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.920e-14 Identity = 73/247 (29.55%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 25 RSLGTDI--ASELVINKFLSSLPSEYVFVRDHLRMEPMLLPERVRAVVRDKY------------LSTAPEGVRTV-VFF-------GNKKNVAESRV-----CFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTV 243
+SLG I A +LV+ LSSLP+EY + + + V+ + KY L G+++ F G K N++ R+ CF C++ GH+K R CP KG G E A+F++ R W+ DSGATAHMTP E +FDY+ +++ VT+A+G+ + + G G + + D I V H+PGLD L S+ + ++G V
Sbjct: 22 QSLGEPIDEARQLVV--LLSSLPAEYEIIASIVENAKDVTLIEVKEKLLKKYKRQDKKEATERALKVTTHGIKSKNARFDKSGRNNGRKDNISRKRIGFEGKCFNCDKFGHMK-----RECPDFKGPGKNEED----AVFAAGESR-----------SSGWLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSVGKLAERGLNV 243
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A0V0Z7R7_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella patagoniensis TaxID=990121 RepID=A0A0V0Z7R7_9BILA) HSP 1 Score: 79.7 bits (195), Expect = 2.750e-13 Identity = 65/233 (27.90%), Postives = 104/233 (44.64%), Query Frame = 0
Query: 25 RSLGTDIASELVINKFLSSLPSEYVFVRDHLRMEPM------LLPERVRAVVRDKYLSTAPEGVRTVVFFGNKKNVAESR-VCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEG 249
R T + L++++ +S+LP +Y + P+ LL ER+R + T V V K+NV + R CF+C+ +GHL NC + + G + S F + F + C W+ADSGA+ HMT + E + D+ T + V V NG+T+P G G + + +G+ + V +VP L NLFS+ ++GF G
Sbjct: 151 RLTSTQLPDLLLMSRIMSTLPQDYFEFKIVWESLPVGERSVNLLIERLRLIEMRLPEKTTDSSVVLTVKTDTKENVKKDRRKCFKCHRIGHLAKNCTMK---TVRNAGKSQQS------FGGESFFCYHAEDNRNTCR-MWLADSGASQHMTRNKEYLSDFVTFPKPVNVKVGNGDTIPAYGRGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKATEKGFNFTANAAG 373
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.470e-13 Identity = 70/244 (28.69%), Postives = 110/244 (45.08%), Query Frame = 0
Query: 30 DIASELVINKFLSSLPSEYVFVRDH---------LRMEPMLLPERVRAVVRD------KYLSTAPEGVRTVVFFGNK-----KNVAESRVCFQCNELGHLKMNCPQRICPICKGIGHGESSHRLPAMFSSDGFRDIDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYGKMLVWMKDRGEIHKFSLSRVAHVPGLDTNLFSLQVVVKQGFTVCLKEEGAAI 252
D A +LVI LSSLP+EY + + ++ LL E R +D K + + F G K KN A C+ C+++GH+K +CP + + E A+F+ + K G W+ DSGATAHMTP +F+YE N+ VT+A+G+ + + G G + + D I + V H+PGLD L S+ + ++G +V ++ I
Sbjct: 139 DEARQLVI--LLSSLPTEYELISSIVENSKDVTLIEVKERLLKEYERLEKKDGTESALKATANGGKFKNAKSFKGRKGNSARKNNAFKGKCYNCDQIGHMKRDCPS------SNVSNDEE-----AVFA------VGK-----GRSAGWLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRI---KMVEVLHIPGLDRRLLSVGKLAERGMSVEFQQNSCVI 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57565.13326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig57565.13326.1 ID=prot_H-paniculata_contig57565.13326.1|Name=mRNA_H-paniculata_contig57565.13326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bpback to top |